RNA–Protein interactions for RNA: ENST00000516258.1

RNU4-71P-201, Transcript of RNA, U4 small nuclear 71, pseudogene, humanhuman

BASIC

Gene RNU4-71P, Length 113 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-71P-201ENST00000516258 ATMINO43313 823 aaPredicted RBP8.89□□□□□ -0.99
RNU4-71P-201ENST00000516258 METRNQ9UJH8 293 aa8.88□□□□□ -0.99
RNU4-71P-201ENST00000516258 TSPYL2Q9H2G4 693 aaPredicted RBP8.86□□□□□ -0.99
RNU4-71P-201ENST00000516258 CCDC61Q9Y6R9 512 aa8.85□□□□□ -0.99
RNU4-71P-201ENST00000516258 POTEMA6NI47 508 aa8.83□□□□□ -1
RNU4-71P-201ENST00000516258 C7P10643 843 aa8.81□□□□□ -1
RNU4-71P-201ENST00000516258 ATN1P54259 1190 aaPredicted RBP8.81□□□□□ -1
RNU4-71P-201ENST00000516258 POTEGQ6S5H5 508 aa8.81□□□□□ -1
RNU4-71P-201ENST00000516258 SLC39A7Q92504 469 aa8.81□□□□□ -1
RNU4-71P-201ENST00000516258 TRPC6Q9Y210 931 aa8.81□□□□□ -1
RNU4-71P-201ENST00000516258 KIF12Q96FN5 646 aa8.8□□□□□ -1
RNU4-71P-201ENST00000516258 POTEFA5A3E0 1075 aa8.78□□□□□ -1
RNU4-71P-201ENST00000516258 LCE2DQ5TA82 110 aaPredicted RBP8.77□□□□□ -1.01
RNU4-71P-201ENST00000516258 BMP2KQ9NSY1 1161 aaPredicted RBP8.77□□□□□ -1.01
RNU4-71P-201ENST00000516258 RASEFQ8IZ41 740 aa8.76□□□□□ -1.01
RNU4-71P-201ENST00000516258 MAP3K13O43283 966 aa8.74□□□□□ -1.01
RNU4-71P-201ENST00000516258 MAMSTRQ6ZN01 415 aa8.7□□□□□ -1.02
RNU4-71P-201ENST00000516258 MIER1Q8N108 512 aa8.7□□□□□ -1.02
RNU4-71P-201ENST00000516258 COLQQ9Y215 455 aaPredicted RBP8.69□□□□□ -1.02
RNU4-71P-201ENST00000516258 TIE1P35590 1138 aa8.68□□□□□ -1.02
RNU4-71P-201ENST00000516258 TTLL13PA6NNM8 815 aa8.67□□□□□ -1.02
RNU4-71P-201ENST00000516258 FAM163AQ96GL9 167 aaPredicted RBP8.66□□□□□ -1.02
RNU4-71P-201ENST00000516258 SCUBE2Q9NQ36 999 aa8.66□□□□□ -1.02
RNU4-71P-201ENST00000516258 PLEKHG5O94827 1062 aa8.62□□□□□ -1.03
RNU4-71P-201ENST00000516258 NUBP1P53384 320 aa8.61□□□□□ -1.03
RNU4-71P-201ENST00000516258 PCDH10Q9P2E7 1040 aa8.61□□□□□ -1.03
RNU4-71P-201ENST00000516258 TRIM35Q9UPQ4 493 aa8.6□□□□□ -1.03
RNU4-71P-201ENST00000516258 PCDHB13Q9Y5F0 798 aa8.6□□□□□ -1.03
RNU4-71P-201ENST00000516258 PLCD3Q8N3E9 789 aa8.59□□□□□ -1.03
RNU4-71P-201ENST00000516258 IFNL1Q8IU54 200 aa8.58□□□□□ -1.04
RNU4-71P-201ENST00000516258 SEC24BO95487 1268 aa8.57□□□□□ -1.04
RNU4-71P-201ENST00000516258 SGIP1Q9BQI5 828 aa8.56□□□□□ -1.04
RNU4-71P-201ENST00000516258 IER5LQ5T953 404 aa8.55□□□□□ -1.04
RNU4-71P-201ENST00000516258 TMEM106CQ9BVX2 250 aa8.51□□□□□ -1.05
RNU4-71P-201ENST00000516258 FAM212AQ96EL1 285 aa8.49□□□□□ -1.05
RNU4-71P-201ENST00000516258 ZBTB47Q9UFB7 747 aaPredicted RBP8.49□□□□□ -1.05
RNU4-71P-201ENST00000516258 IRX5P78411 483 aaPredicted RBP8.48□□□□□ -1.05
RNU4-71P-201ENST00000516258 SLAIN1Q8ND83 568 aa8.48□□□□□ -1.05
RNU4-71P-201ENST00000516258 ST18O60284 1047 aa8.47□□□□□ -1.05
RNU4-71P-201ENST00000516258 CDAN1Q8IWY9 1227 aa8.47□□□□□ -1.05
RNU4-71P-201ENST00000516258 FKBP8Q14318 412 aa8.46□□□□□ -1.06
RNU4-71P-201ENST00000516258 PYGBP11216 843 aa8.44□□□□□ -1.06
RNU4-71P-201ENST00000516258 PLCG2P16885 1265 aa8.44□□□□□ -1.06
RNU4-71P-201ENST00000516258 PCDHB8Q9UN66 801 aa8.42□□□□□ -1.06
RNU4-71P-201ENST00000516258 DCAF8Q5TAQ9 597 aa8.39□□□□□ -1.07
RNU4-71P-201ENST00000516258 OCEL1Q9H607 264 aa8.39□□□□□ -1.07
RNU4-71P-201ENST00000516258 PDCD7Q8N8D1 485 aaKnown RBP8.35□□□□□ -1.07
RNU4-71P-201ENST00000516258 MARVELD3Q96A59 401 aa8.32□□□□□ -1.08
RNU4-71P-201ENST00000516258 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.31□□□□□ -1.08
RNU4-71P-201ENST00000516258 TMEM121BQ9BXQ6 578 aaPredicted RBP8.3□□□□□ -1.08
RNU4-71P-201ENST00000516258 MMRN1Q13201 1228 aa8.28□□□□□ -1.08
RNU4-71P-201ENST00000516258 SPNS2Q8IVW8 549 aa8.28□□□□□ -1.08
RNU4-71P-201ENST00000516258 FBXO3Q9UK99 471 aa8.27□□□□□ -1.09
RNU4-71P-201ENST00000516258 VASPP50552 380 aaPredicted RBP8.26□□□□□ -1.09
RNU4-71P-201ENST00000516258 SNPHO15079 494 aa8.25□□□□□ -1.09
RNU4-71P-201ENST00000516258 ZNF467Q7Z7K2 595 aaPredicted RBP8.25□□□□□ -1.09
RNU4-71P-201ENST00000516258 POTEB3A0JP26 581 aa8.24□□□□□ -1.09
RNU4-71P-201ENST00000516258 POTEBQ6S5H4 581 aa8.24□□□□□ -1.09
RNU4-71P-201ENST00000516258 GSE1Q14687 1217 aa8.23□□□□□ -1.09
RNU4-71P-201ENST00000516258 KLHL34Q8N239 644 aa8.23□□□□□ -1.09
RNU4-71P-201ENST00000516258 CHRM1P11229 460 aaPredicted RBP8.22□□□□□ -1.09
RNU4-71P-201ENST00000516258 PSEN1P49768 467 aa8.22□□□□□ -1.09
RNU4-71P-201ENST00000516258 MKRN3Q13064 507 aaKnown RBP8.22□□□□□ -1.09
RNU4-71P-201ENST00000516258 C3orf67Q6ZVT6 689 aa8.22□□□□□ -1.09
RNU4-71P-201ENST00000516258 ILDR1Q86SU0 546 aaPredicted RBP8.22□□□□□ -1.09
RNU4-71P-201ENST00000516258 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.22□□□□□ -1.09
RNU4-71P-201ENST00000516258 DPY19L2Q6NUT2 758 aa8.21□□□□□ -1.1
RNU4-71P-201ENST00000516258 EMP3P54852 163 aa8.2□□□□□ -1.1
RNU4-71P-201ENST00000516258 GOLGA2Q08379 1002 aa8.2□□□□□ -1.1
RNU4-71P-201ENST00000516258 L3MBTL3Q96JM7 780 aaPredicted RBP8.2□□□□□ -1.1
RNU4-71P-201ENST00000516258 KRTAP3-3Q9BYR6 98 aa8.19□□□□□ -1.1
RNU4-71P-201ENST00000516258 KRTAP3-2Q9BYR7 98 aa8.19□□□□□ -1.1
RNU4-71P-201ENST00000516258 HS3ST6Q96QI5 342 aa8.17□□□□□ -1.1
RNU4-71P-201ENST00000516258 FAM205CA6NFA0 338 aa8.15□□□□□ -1.1
RNU4-71P-201ENST00000516258 PDAP1Q13442 181 aaKnown RBP8.15□□□□□ -1.1
RNU4-71P-201ENST00000516258 HOXB3P14651 431 aaPredicted RBP8.13□□□□□ -1.11
RNU4-71P-201ENST00000516258 IFNLR1Q8IU57 520 aaPredicted RBP8.13□□□□□ -1.11
RNU4-71P-201ENST00000516258 CABP2Q9NPB3 220 aa8.13□□□□□ -1.11
RNU4-71P-201ENST00000516258 BOLA1Q9Y3E2 137 aa8.1□□□□□ -1.11
RNU4-71P-201ENST00000516258 SPOCK2Q92563 424 aa8.08□□□□□ -1.12
RNU4-71P-201ENST00000516258 CIZ1Q9ULV3 898 aaPredicted RBP8.08□□□□□ -1.12
RNU4-71P-201ENST00000516258 HOXB1P14653 301 aaPredicted RBP8.04□□□□□ -1.12
RNU4-71P-201ENST00000516258 EFCAB3Q8N7B9 438 aa8.03□□□□□ -1.12
RNU4-71P-201ENST00000516258 TMEM92Q6UXU6 159 aa8.02□□□□□ -1.13
RNU4-71P-201ENST00000516258 G3V3G9 751 aa8.01□□□□□ -1.13
RNU4-71P-201ENST00000516258 ZNF710Q8N1W2 664 aa8□□□□□ -1.13
RNU4-71P-201ENST00000516258 DOK7Q18PE1 504 aa7.98□□□□□ -1.13
RNU4-71P-201ENST00000516258 ERBB3P21860 1342 aa7.98□□□□□ -1.13
RNU4-71P-201ENST00000516258 MICALL2Q8IY33 904 aa7.97□□□□□ -1.13
RNU4-71P-201ENST00000516258 VARS2Q5ST30 1063 aaKnown RBP7.96□□□□□ -1.14
RNU4-71P-201ENST00000516258 MS4A4AQ96JQ5 239 aa7.96□□□□□ -1.14
RNU4-71P-201ENST00000516258 RNF25Q96BH1 459 aaPredicted RBP7.95□□□□□ -1.14
RNU4-71P-201ENST00000516258 GPR153Q6NV75 609 aa7.93□□□□□ -1.14
RNU4-71P-201ENST00000516258 RNF166Q96A37 237 aaPredicted RBP7.91□□□□□ -1.14
RNU4-71P-201ENST00000516258 PHF8Q9UPP1 1060 aa7.91□□□□□ -1.14
RNU4-71P-201ENST00000516258 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.9□□□□□ -1.14
RNU4-71P-201ENST00000516258 RIMBP2O15034 1052 aa7.9□□□□□ -1.14
RNU4-71P-201ENST00000516258 TRIM41Q8WV44 630 aa7.9□□□□□ -1.14
RNU4-71P-201ENST00000516258 ZFP91Q96JP5 570 aaPredicted RBP7.9□□□□□ -1.14
RNU4-71P-201ENST00000516258 ZNF687Q8N1G0 1237 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms