RNA–Protein interactions for RNA: ENST00000515855.5

NREP-223, Transcript of neuronal regeneration related protein, human

TSL 4 BASIC

Gene NREP, Length 801 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NREP-223	ENST00000515855	CLCN6	P51797	869 aa		13.66	□□□□□ -0.22
NREP-223	ENST00000515855	ZRANB1	Q9UGI0	708 aa		13.66	□□□□□ -0.22
NREP-223	ENST00000515855	MNX1	P50219	401 aa	Predicted RBP	13.61	□□□□□ -0.23
NREP-223	ENST00000515855	GALR2	O43603	387 aa	Predicted RBP	13.6	□□□□□ -0.23
NREP-223	ENST00000515855	DCBLD2	Q96PD2	775 aa		13.56	□□□□□ -0.24
NREP-223	ENST00000515855	PHF12	Q96QT6	1004 aa		13.52	□□□□□ -0.25
NREP-223	ENST00000515855	PROM2	Q8N271	834 aa		13.47	□□□□□ -0.25
NREP-223	ENST00000515855	POTEB2	H3BUK9	544 aa		13.43	□□□□□ -0.26
NREP-223	ENST00000515855	NCAPD3	P42695	1498 aa		13.42	□□□□□ -0.26
NREP-223	ENST00000515855	PAK3	O75914	559 aa	Predicted RBP	13.4	□□□□□ -0.26
NREP-223	ENST00000515855	NPM1	P06748	294 aa	Known RBP eCLIP	13.4	□□□□□ -0.26
NREP-223	ENST00000515855	PELP1	Q8IZL8	1130 aa	Known RBP	13.39	□□□□□ -0.27
NREP-223	ENST00000515855	ATAD2B	Q9ULI0	1458 aa		13.37	□□□□□ -0.27
NREP-223	ENST00000515855	OTUD5	Q96G74	571 aa		13.37	□□□□□ -0.27
NREP-223	ENST00000515855	SMARCA4	P51532	1647 aa		13.35	□□□□□ -0.27
NREP-223	ENST00000515855	MS4A3	Q96HJ5	214 aa		13.33	□□□□□ -0.28
NREP-223	ENST00000515855	SMARCA2	P51531	1590 aa		13.31	□□□□□ -0.28
NREP-223	ENST00000515855	DNAJC5	Q9H3Z4	198 aa		13.3	□□□□□ -0.28
NREP-223	ENST00000515855	HMGXB3	Q12766	1538 aa		13.29	□□□□□ -0.28
NREP-223	ENST00000515855	ASTL	Q6HA08	431 aa	Predicted RBP	13.28	□□□□□ -0.28
NREP-223	ENST00000515855	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	13.27	□□□□□ -0.29
NREP-223	ENST00000515855	ERCC6	Q03468	1493 aa		13.26	□□□□□ -0.29
NREP-223	ENST00000515855	ATMIN	O43313	823 aa	Predicted RBP	13.25	□□□□□ -0.29
NREP-223	ENST00000515855	CCDC61	Q9Y6R9	512 aa		13.25	□□□□□ -0.29
NREP-223	ENST00000515855	CUX2	O14529	1486 aa		13.24	□□□□□ -0.29
NREP-223	ENST00000515855	NES	P48681	1621 aa		13.24	□□□□□ -0.29
NREP-223	ENST00000515855	TSPYL2	Q9H2G4	693 aa	Predicted RBP	13.23	□□□□□ -0.29
NREP-223	ENST00000515855	BAZ1B	Q9UIG0	1483 aa	Known RBP	13.23	□□□□□ -0.29
NREP-223	ENST00000515855	POTEJ	P0CG39	1038 aa		13.22	□□□□□ -0.29
NREP-223	ENST00000515855	PEG3	Q9GZU2	1588 aa		13.22	□□□□□ -0.29
NREP-223	ENST00000515855	MROH2B	Q7Z745	1585 aa		13.2	□□□□□ -0.3
NREP-223	ENST00000515855	METRN	Q9UJH8	293 aa		13.19	□□□□□ -0.3
NREP-223	ENST00000515855	KIF12	Q96FN5	646 aa		13.17	□□□□□ -0.3
NREP-223	ENST00000515855	TRPC6	Q9Y210	931 aa		13.15	□□□□□ -0.3
NREP-223	ENST00000515855	ATN1	P54259	1190 aa	Predicted RBP	13.14	□□□□□ -0.31
NREP-223	ENST00000515855	RASEF	Q8IZ41	740 aa		13.13	□□□□□ -0.31
NREP-223	ENST00000515855	SLC39A7	Q92504	469 aa		13.13	□□□□□ -0.31
NREP-223	ENST00000515855	C7	P10643	843 aa		13.12	□□□□□ -0.31
NREP-223	ENST00000515855	LAMC3	Q9Y6N6	1575 aa		13.11	□□□□□ -0.31
NREP-223	ENST00000515855	POTEF	A5A3E0	1075 aa		13.09	□□□□□ -0.31
NREP-223	ENST00000515855	THOC2	Q8NI27	1593 aa	Known RBP	13.09	□□□□□ -0.31
NREP-223	ENST00000515855	BMP2K	Q9NSY1	1161 aa	Predicted RBP	13.09	□□□□□ -0.31
NREP-223	ENST00000515855	MAP3K13	O43283	966 aa		13.07	□□□□□ -0.32
NREP-223	ENST00000515855	MIER1	Q8N108	512 aa		13.07	□□□□□ -0.32
NREP-223	ENST00000515855	WIZ	O95785	1651 aa		13.05	□□□□□ -0.32
NREP-223	ENST00000515855	KIF21A	Q7Z4S6	1674 aa		13.05	□□□□□ -0.32
NREP-223	ENST00000515855	PLSCR2	Q9NRY7	297 aa		13.05	□□□□□ -0.32
NREP-223	ENST00000515855	POTEM	A6NI47	508 aa		13.03	□□□□□ -0.32
NREP-223	ENST00000515855	PDS5B	Q9NTI5	1447 aa		13.02	□□□□□ -0.33
NREP-223	ENST00000515855	CADPS	Q9ULU8	1353 aa		13	□□□□□ -0.33
NREP-223	ENST00000515855	LCE2D	Q5TA82	110 aa	Predicted RBP	13	□□□□□ -0.33
NREP-223	ENST00000515855	POTEG	Q6S5H5	508 aa		13	□□□□□ -0.33
NREP-223	ENST00000515855	TIE1	P35590	1138 aa		12.99	□□□□□ -0.33
NREP-223	ENST00000515855	PLEKHG5	O94827	1062 aa		12.96	□□□□□ -0.33
NREP-223	ENST00000515855	NUBP1	P53384	320 aa		12.96	□□□□□ -0.33
NREP-223	ENST00000515855	TTLL13P	A6NNM8	815 aa		12.95	□□□□□ -0.34
NREP-223	ENST00000515855	MAMSTR	Q6ZN01	415 aa		12.93	□□□□□ -0.34
NREP-223	ENST00000515855	COLQ	Q9Y215	455 aa	Predicted RBP	12.93	□□□□□ -0.34
NREP-223	ENST00000515855	PLCD3	Q8N3E9	789 aa		12.92	□□□□□ -0.34
NREP-223	ENST00000515855	RSF1	Q96T23	1441 aa	Predicted RBP	12.92	□□□□□ -0.34
NREP-223	ENST00000515855	MRC2	Q9UBG0	1479 aa		12.91	□□□□□ -0.34
NREP-223	ENST00000515855	WDR62	O43379	1518 aa		12.89	□□□□□ -0.35
NREP-223	ENST00000515855	SGIP1	Q9BQI5	828 aa		12.87	□□□□□ -0.35
NREP-223	ENST00000515855	SCUBE2	Q9NQ36	999 aa		12.87	□□□□□ -0.35
NREP-223	ENST00000515855	PCDHB13	Q9Y5F0	798 aa		12.86	□□□□□ -0.35
NREP-223	ENST00000515855	CFTR	P13569	1480 aa		12.85	□□□□□ -0.35
NREP-223	ENST00000515855	FANCD2	Q9BXW9	1451 aa		12.85	□□□□□ -0.35
NREP-223	ENST00000515855	CEP164	Q9UPV0	1460 aa		12.85	□□□□□ -0.35
NREP-223	ENST00000515855	TOP2A	P11388	1531 aa	Known RBP	12.85	□□□□□ -0.35
NREP-223	ENST00000515855	TRIM35	Q9UPQ4	493 aa		12.85	□□□□□ -0.35
NREP-223	ENST00000515855	FKBP8	Q14318	412 aa		12.84	□□□□□ -0.35
NREP-223	ENST00000515855	IFNL1	Q8IU54	200 aa		12.84	□□□□□ -0.35
NREP-223	ENST00000515855	FAM163A	Q96GL9	167 aa	Predicted RBP	12.8	□□□□□ -0.36
NREP-223	ENST00000515855	ZBTB47	Q9UFB7	747 aa	Predicted RBP	12.8	□□□□□ -0.36
NREP-223	ENST00000515855	IER5L	Q5T953	404 aa		12.79	□□□□□ -0.36
NREP-223	ENST00000515855	SEC24B	O95487	1268 aa		12.77	□□□□□ -0.37
NREP-223	ENST00000515855	URB2	Q14146	1524 aa	Known RBP	12.77	□□□□□ -0.37
NREP-223	ENST00000515855	FAM212A	Q96EL1	285 aa		12.75	□□□□□ -0.37
NREP-223	ENST00000515855	PCDH10	Q9P2E7	1040 aa		12.74	□□□□□ -0.37
NREP-223	ENST00000515855	CCDC88B	A6NC98	1476 aa		12.73	□□□□□ -0.37
NREP-223	ENST00000515855	TMEM106C	Q9BVX2	250 aa		12.73	□□□□□ -0.37
NREP-223	ENST00000515855	PRDM2	Q13029	1718 aa		12.72	□□□□□ -0.37
NREP-223	ENST00000515855	TRIM41	Q8WV44	630 aa		12.7	□□□□□ -0.38
NREP-223	ENST00000515855	IRX5	P78411	483 aa	Predicted RBP	12.68	□□□□□ -0.38
NREP-223	ENST00000515855	PYGB	P11216	843 aa		12.66	□□□□□ -0.38
NREP-223	ENST00000515855	TOPBP1	Q92547	1522 aa		12.62	□□□□□ -0.39
NREP-223	ENST00000515855	ZNF608	Q9ULD9	1512 aa	Predicted RBP	12.62	□□□□□ -0.39
NREP-223	ENST00000515855	DCAF8	Q5TAQ9	597 aa		12.61	□□□□□ -0.39
NREP-223	ENST00000515855	SLAIN1	Q8ND83	568 aa		12.61	□□□□□ -0.39
NREP-223	ENST00000515855	PCDHB8	Q9UN66	801 aa		12.61	□□□□□ -0.39
NREP-223	ENST00000515855	IFT140	Q96RY7	1462 aa		12.6	□□□□□ -0.39
NREP-223	ENST00000515855	PLCG2	P16885	1265 aa		12.6	□□□□□ -0.39
NREP-223	ENST00000515855	ST18	O60284	1047 aa		12.57	□□□□□ -0.4
NREP-223	ENST00000515855	ABCC8	Q09428	1581 aa		12.56	□□□□□ -0.4
NREP-223	ENST00000515855	DNMBP	Q6XZF7	1577 aa		12.56	□□□□□ -0.4
NREP-223	ENST00000515855	OCEL1	Q9H607	264 aa		12.54	□□□□□ -0.4
NREP-223	ENST00000515855	FBXO3	Q9UK99	471 aa		12.53	□□□□□ -0.4
NREP-223	ENST00000515855	EIF4G3	O43432	1585 aa	Known RBP	12.52	□□□□□ -0.4
NREP-223	ENST00000515855	CDAN1	Q8IWY9	1227 aa		12.52	□□□□□ -0.41
NREP-223	ENST00000515855	TARBP1	Q13395	1621 aa	Known RBP	12.51	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms