RNA–Protein interactions for RNA: ENST00000515564.5

GATB-212, Transcript of glutamyl-tRNA amidotransferase subunit B, humanhuman

TSL 2

Gene GATB, Length 6,552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATB-212ENST00000515564 POGKQ9P215 609 aa11.14□□□□□ -0.63
GATB-212ENST00000515564 CFDP1Q9UEE9 299 aaPredicted RBP11.13□□□□□ -0.63
GATB-212ENST00000515564 BAZ1BQ9UIG0 1483 aaKnown RBP11.13□□□□□ -0.63
GATB-212ENST00000515564 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.12□□□□□ -0.63
GATB-212ENST00000515564 ANP32AP39687 249 aaKnown RBP11.11□□□□□ -0.63
GATB-212ENST00000515564 DDX10Q13206 875 aaKnown RBP11.11□□□□□ -0.63
GATB-212ENST00000515564 RSF1Q96T23 1441 aaPredicted RBP11.11□□□□□ -0.63
GATB-212ENST00000515564 HNRNPUQ00839 825 aaKnown RBP eCLIP11.1□□□□□ -0.63
GATB-212ENST00000515564 CDK11BP21127 795 aaKnown RBP11.1□□□□□ -0.63
GATB-212ENST00000515564 ZCCHC6Q5VYS8 1495 aaKnown RBP11.08□□□□□ -0.64
GATB-212ENST00000515564 CCDC180Q9P1Z9 1646 aa11.08□□□□□ -0.64
GATB-212ENST00000515564 AEBP2Q6ZN18 517 aaPredicted RBP11.08□□□□□ -0.64
GATB-212ENST00000515564 TULP1O00294 542 aaPredicted RBP11.07□□□□□ -0.64
GATB-212ENST00000515564 ANP32BQ92688 251 aaKnown RBP11.07□□□□□ -0.64
GATB-212ENST00000515564 HDGFP51858 240 aaKnown RBP11.07□□□□□ -0.64
GATB-212ENST00000515564 CFAP53Q96M91 514 aa11.06□□□□□ -0.64
GATB-212ENST00000515564 EIF4G1Q04637 1599 aaKnown RBP11.04□□□□□ -0.64
GATB-212ENST00000515564 LAS1LQ9Y4W2 734 aaKnown RBP11.04□□□□□ -0.64
GATB-212ENST00000515564 GTF3C3Q9Y5Q9 886 aa11.03□□□□□ -0.64
GATB-212ENST00000515564 MRS2Q9HD23 443 aa11.03□□□□□ -0.64
GATB-212ENST00000515564 CLIP1P30622 1438 aa11.02□□□□□ -0.65
GATB-212ENST00000515564 SOX12O15370 315 aa11.02□□□□□ -0.65
GATB-212ENST00000515564 HIRIP3Q9BW71 556 aaPredicted RBP11.02□□□□□ -0.65
GATB-212ENST00000515564 CCDC9Q9Y3X0 531 aaKnown RBP11.01□□□□□ -0.65
GATB-212ENST00000515564 CDCA8Q53HL2 280 aa11.01□□□□□ -0.65
GATB-212ENST00000515564 KANK1Q14678 1352 aa11.01□□□□□ -0.65
GATB-212ENST00000515564 KNSTRNQ9Y448 316 aa11□□□□□ -0.65
GATB-212ENST00000515564 NACADO15069 1562 aa11□□□□□ -0.65
GATB-212ENST00000515564 EIF4G2P78344 907 aaKnown RBP eCLIP11□□□□□ -0.65
GATB-212ENST00000515564 GGT6Q6P531 493 aa10.99□□□□□ -0.65
GATB-212ENST00000515564 KIF27Q86VH2 1401 aa10.99□□□□□ -0.65
GATB-212ENST00000515564 TNNT2P45379 298 aaPredicted RBP10.98□□□□□ -0.65
GATB-212ENST00000515564 GOLGA2Q08379 1002 aa10.98□□□□□ -0.65
GATB-212ENST00000515564 FKBP8Q14318 412 aa10.98□□□□□ -0.65
GATB-212ENST00000515564 MAPK8IP3Q9UPT6 1336 aa10.98□□□□□ -0.65
GATB-212ENST00000515564 DCAF1Q9Y4B6 1507 aa10.97□□□□□ -0.65
GATB-212ENST00000515564 CARD11Q9BXL7 1154 aa10.96□□□□□ -0.65
GATB-212ENST00000515564 CCDC136Q96JN2 1154 aa10.96□□□□□ -0.65
GATB-212ENST00000515564 PAK3O75914 559 aaPredicted RBP10.96□□□□□ -0.66
GATB-212ENST00000515564 NEUROD2Q15784 382 aa10.95□□□□□ -0.66
GATB-212ENST00000515564 NUDCQ9Y266 331 aa10.95□□□□□ -0.66
GATB-212ENST00000515564 SAFB2Q14151 953 aaKnown RBP eCLIP10.95□□□□□ -0.66
GATB-212ENST00000515564 TAOK2Q9UL54 1235 aa10.95□□□□□ -0.66
GATB-212ENST00000515564 CCNB3Q8WWL7 1395 aa10.95□□□□□ -0.66
GATB-212ENST00000515564 WRNQ14191 1432 aaPredicted RBP eCLIP10.94□□□□□ -0.66
GATB-212ENST00000515564 CSB-PGBD3P0DP91 1061 aa10.94□□□□□ -0.66
GATB-212ENST00000515564 SRPK2P78362 688 aaKnown RBP10.94□□□□□ -0.66
GATB-212ENST00000515564 ACIN1Q9UKV3 1341 aaKnown RBP10.93□□□□□ -0.66
GATB-212ENST00000515564 STK26Q9P289 416 aa10.93□□□□□ -0.66
GATB-212ENST00000515564 U2SURPO15042 1029 aaKnown RBP10.92□□□□□ -0.66
GATB-212ENST00000515564 OS9Q13438 667 aaPredicted RBP10.92□□□□□ -0.66
GATB-212ENST00000515564 GOLGA3Q08378 1498 aa10.92□□□□□ -0.66
GATB-212ENST00000515564 SENP3-EIF4A1A0A087X0R7 540 aa10.91□□□□□ -0.66
GATB-212ENST00000515564 FTSJ3Q8IY81 847 aaKnown RBP10.91□□□□□ -0.66
GATB-212ENST00000515564 TMX4Q9H1E5 349 aaPredicted RBP10.89□□□□□ -0.67
GATB-212ENST00000515564 CASC1Q6TDU7 716 aa10.89□□□□□ -0.67
GATB-212ENST00000515564 ISY1Q9ULR0 285 aaKnown RBP10.89□□□□□ -0.67
GATB-212ENST00000515564 ZNF330Q9Y3S2 320 aaPredicted RBP10.88□□□□□ -0.67
GATB-212ENST00000515564 CARMIL2Q6F5E8 1435 aa10.87□□□□□ -0.67
GATB-212ENST00000515564 NCLP19338 710 aaKnown RBP10.87□□□□□ -0.67
GATB-212ENST00000515564 PDS5BQ9NTI5 1447 aa10.87□□□□□ -0.67
GATB-212ENST00000515564 CC2D1BQ5T0F9 858 aaKnown RBP10.86□□□□□ -0.67
GATB-212ENST00000515564 PNNQ9H307 717 aaKnown RBP10.86□□□□□ -0.67
GATB-212ENST00000515564 TPRNQ4KMQ1 711 aa10.86□□□□□ -0.67
GATB-212ENST00000515564 EID1Q9Y6B2 187 aa10.86□□□□□ -0.67
GATB-212ENST00000515564 IRX6P78412 446 aaPredicted RBP10.85□□□□□ -0.67
GATB-212ENST00000515564 CUX2O14529 1486 aa10.85□□□□□ -0.67
GATB-212ENST00000515564 ZRSR1Q15695 479 aaKnown RBP10.84□□□□□ -0.67
GATB-212ENST00000515564 DCAF11Q8TEB1 546 aa10.84□□□□□ -0.67
GATB-212ENST00000515564 RTF1Q92541 710 aaKnown RBP10.84□□□□□ -0.67
GATB-212ENST00000515564 NAP1L2Q9ULW6 460 aaPredicted RBP10.84□□□□□ -0.67
GATB-212ENST00000515564 EEA1Q15075 1411 aa10.84□□□□□ -0.67
GATB-212ENST00000515564 CECR2Q9BXF3 1484 aa10.83□□□□□ -0.68
GATB-212ENST00000515564 CARMIL1Q5VZK9 1371 aa10.83□□□□□ -0.68
GATB-212ENST00000515564 NCBP3Q53F19 620 aaKnown RBP10.83□□□□□ -0.68
GATB-212ENST00000515564 CLSTN1O94985 981 aa10.82□□□□□ -0.68
GATB-212ENST00000515564 CYB5RLQ6IPT4 315 aa10.82□□□□□ -0.68
GATB-212ENST00000515564 FGD1P98174 961 aa10.82□□□□□ -0.68
GATB-212ENST00000515564 HDGFL2Q7Z4V5 671 aaPredicted RBP10.82□□□□□ -0.68
GATB-212ENST00000515564 MEX3CQ5U5Q3 659 aaKnown RBP10.82□□□□□ -0.68
GATB-212ENST00000515564 TMF1P82094 1093 aa10.81□□□□□ -0.68
GATB-212ENST00000515564 CEP162Q5TB80 1403 aa10.81□□□□□ -0.68
GATB-212ENST00000515564 MYO15BQ96JP2 1530 aa10.81□□□□□ -0.68
GATB-212ENST00000515564 FRAT1Q92837 279 aaPredicted RBP10.81□□□□□ -0.68
GATB-212ENST00000515564 G3V3G9 751 aa10.8□□□□□ -0.68
GATB-212ENST00000515564 DCAF8Q5TAQ9 597 aa10.8□□□□□ -0.68
GATB-212ENST00000515564 EFCAB2Q5VUJ9 269 aa10.8□□□□□ -0.68
GATB-212ENST00000515564 KCNJ4P48050 445 aa10.8□□□□□ -0.68
GATB-212ENST00000515564 CEP164Q9UPV0 1460 aa10.79□□□□□ -0.68
GATB-212ENST00000515564 MORC1Q86VD1 984 aa10.79□□□□□ -0.68
GATB-212ENST00000515564 PHF23Q9BUL5 403 aaPredicted RBP10.78□□□□□ -0.68
GATB-212ENST00000515564 NUTM2DQ5VT03 806 aaPredicted RBP10.77□□□□□ -0.68
GATB-212ENST00000515564 BAZ1AQ9NRL2 1556 aaPredicted RBP10.77□□□□□ -0.68
GATB-212ENST00000515564 SOGA1O94964 1423 aa10.77□□□□□ -0.69
GATB-212ENST00000515564 TDRD9Q8NDG6 1382 aaKnown RBP10.76□□□□□ -0.69
GATB-212ENST00000515564 KIF3BO15066 747 aa10.76□□□□□ -0.69
GATB-212ENST00000515564 MSH5O43196 834 aa10.76□□□□□ -0.69
GATB-212ENST00000515564 FHAD1B1AJZ9 1412 aa10.76□□□□□ -0.69
GATB-212ENST00000515564 BECN1Q14457 450 aa10.75□□□□□ -0.69
GATB-212ENST00000515564 NGDNQ8NEJ9 315 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms