RNA–Protein interactions for RNA: ENST00000513349.5

DROSHA-220, Transcript of drosha ribonuclease III, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DROSHA, Length 4,681 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHA-220ENST00000513349 MTUS2Q5JR59 1369 aa12.18□□□□□ -0.46
DROSHA-220ENST00000513349 NOP58Q9Y2X3 529 aaKnown RBP12.18□□□□□ -0.46
DROSHA-220ENST00000513349 ABCC8Q09428 1581 aa12.17□□□□□ -0.46
DROSHA-220ENST00000513349 DDRGK1Q96HY6 314 aa12.16□□□□□ -0.46
DROSHA-220ENST00000513349 GLIPR1L2Q4G1C9 344 aa12.16□□□□□ -0.46
DROSHA-220ENST00000513349 PPM1GO15355 546 aaPredicted RBP12.14□□□□□ -0.47
DROSHA-220ENST00000513349 SETD5Q9C0A6 1442 aa12.14□□□□□ -0.47
DROSHA-220ENST00000513349 SIN3AQ96ST3 1273 aa12.14□□□□□ -0.47
DROSHA-220ENST00000513349 TOP2AP11388 1531 aaKnown RBP12.12□□□□□ -0.47
DROSHA-220ENST00000513349 CANXP27824 592 aaKnown RBP12.12□□□□□ -0.47
DROSHA-220ENST00000513349 DHX57Q6P158 1386 aaKnown RBP12.12□□□□□ -0.47
DROSHA-220ENST00000513349 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.11□□□□□ -0.47
DROSHA-220ENST00000513349 DEKP35659 375 aaKnown RBP12.11□□□□□ -0.47
DROSHA-220ENST00000513349 BAZ1BQ9UIG0 1483 aaKnown RBP12.11□□□□□ -0.47
DROSHA-220ENST00000513349 FHAD1B1AJZ9 1412 aa12.1□□□□□ -0.47
DROSHA-220ENST00000513349 UPF2Q9HAU5 1272 aaKnown RBP12.1□□□□□ -0.47
DROSHA-220ENST00000513349 WIZO95785 1651 aa12.09□□□□□ -0.47
DROSHA-220ENST00000513349 CHIC2Q9UKJ5 165 aa12.08□□□□□ -0.48
DROSHA-220ENST00000513349 RAB3GAP2Q9H2M9 1393 aa12.07□□□□□ -0.48
DROSHA-220ENST00000513349 SLC4A1APQ9BWU0 796 aaKnown RBP12.05□□□□□ -0.48
DROSHA-220ENST00000513349 KANK4Q5T7N3 995 aaPredicted RBP12.05□□□□□ -0.48
DROSHA-220ENST00000513349 B4GALNT3Q6L9W6 998 aa12.05□□□□□ -0.48
DROSHA-220ENST00000513349 FANCIQ9NVI1 1328 aa12.04□□□□□ -0.48
DROSHA-220ENST00000513349 PPP1R15AO75807 674 aaPredicted RBP12.03□□□□□ -0.48
DROSHA-220ENST00000513349 NEFMP07197 916 aa12.02□□□□□ -0.48
DROSHA-220ENST00000513349 ANP32BQ92688 251 aaKnown RBP12.02□□□□□ -0.49
DROSHA-220ENST00000513349 RRP7BPQ9NSQ0 103 aa12.02□□□□□ -0.49
DROSHA-220ENST00000513349 SALL2Q9Y467 1007 aaPredicted RBP12.01□□□□□ -0.49
DROSHA-220ENST00000513349 ZNF777Q9ULD5 760 aaPredicted RBP11.99□□□□□ -0.49
DROSHA-220ENST00000513349 BECN1Q14457 450 aa11.99□□□□□ -0.49
DROSHA-220ENST00000513349 ARID3CA6NKF2 412 aa11.98□□□□□ -0.49
DROSHA-220ENST00000513349 ARHGAP35Q9NRY4 1499 aa11.97□□□□□ -0.49
DROSHA-220ENST00000513349 WDR43Q15061 677 aaKnown RBP eCLIP11.97□□□□□ -0.49
DROSHA-220ENST00000513349 RAPGEF2Q9Y4G8 1499 aa11.96□□□□□ -0.49
DROSHA-220ENST00000513349 RUSC2Q8N2Y8 1516 aa11.95□□□□□ -0.5
DROSHA-220ENST00000513349 HSPA5P11021 654 aaKnown RBP11.95□□□□□ -0.5
DROSHA-220ENST00000513349 CARMIL1Q5VZK9 1371 aa11.94□□□□□ -0.5
DROSHA-220ENST00000513349 LAS1LQ9Y4W2 734 aaKnown RBP11.94□□□□□ -0.5
DROSHA-220ENST00000513349 KCNH8Q96L42 1107 aa11.93□□□□□ -0.5
DROSHA-220ENST00000513349 IPO9Q96P70 1041 aaKnown RBP11.93□□□□□ -0.5
DROSHA-220ENST00000513349 TCERG1O14776 1098 aaKnown RBP11.92□□□□□ -0.5
DROSHA-220ENST00000513349 HSP90AA1P07900 732 aaKnown RBP11.91□□□□□ -0.5
DROSHA-220ENST00000513349 TSPY4P0CV99 314 aa11.9□□□□□ -0.5
DROSHA-220ENST00000513349 TSPY10P0CW01 314 aa11.9□□□□□ -0.5
DROSHA-220ENST00000513349 CUX2O14529 1486 aa11.89□□□□□ -0.51
DROSHA-220ENST00000513349 SMARCA4P51532 1647 aa11.89□□□□□ -0.51
DROSHA-220ENST00000513349 USP35Q9P2H5 1018 aa11.89□□□□□ -0.51
DROSHA-220ENST00000513349 KDM2AQ9Y2K7 1162 aa11.89□□□□□ -0.51
DROSHA-220ENST00000513349 SMARCA2P51531 1590 aa11.89□□□□□ -0.51
DROSHA-220ENST00000513349 RTN4Q9NQC3 1192 aaKnown RBP11.88□□□□□ -0.51
DROSHA-220ENST00000513349 NUDCQ9Y266 331 aa11.88□□□□□ -0.51
DROSHA-220ENST00000513349 CARD11Q9BXL7 1154 aa11.87□□□□□ -0.51
DROSHA-220ENST00000513349 KIF21BO75037 1637 aa11.87□□□□□ -0.51
DROSHA-220ENST00000513349 FMN1Q68DA7 1419 aa11.87□□□□□ -0.51
DROSHA-220ENST00000513349 ZBED9Q6R2W3 1325 aa11.85□□□□□ -0.51
DROSHA-220ENST00000513349 TRIM44Q96DX7 344 aaPredicted RBP11.83□□□□□ -0.52
DROSHA-220ENST00000513349 CDCA8Q53HL2 280 aa11.82□□□□□ -0.52
DROSHA-220ENST00000513349 RRBP1Q9P2E9 1410 aaKnown RBP11.82□□□□□ -0.52
DROSHA-220ENST00000513349 FBLN2P98095 1184 aa11.82□□□□□ -0.52
DROSHA-220ENST00000513349 L1TD1Q5T7N2 865 aaKnown RBP11.82□□□□□ -0.52
DROSHA-220ENST00000513349 RCAN3Q9UKA8 241 aa11.81□□□□□ -0.52
DROSHA-220ENST00000513349 RALBP1Q15311 655 aa11.8□□□□□ -0.52
DROSHA-220ENST00000513349 ARXQ96QS3 562 aa11.8□□□□□ -0.52
DROSHA-220ENST00000513349 PDE3BQ13370 1112 aa11.8□□□□□ -0.52
DROSHA-220ENST00000513349 PRKRIP1Q9H875 184 aaPredicted RBP11.79□□□□□ -0.52
DROSHA-220ENST00000513349 MPHOSPH9Q99550 1183 aa11.79□□□□□ -0.52
DROSHA-220ENST00000513349 CFDP1Q9UEE9 299 aaPredicted RBP11.79□□□□□ -0.52
DROSHA-220ENST00000513349 ROCK2O75116 1388 aaKnown RBP11.78□□□□□ -0.52
DROSHA-220ENST00000513349 KNSTRNQ9Y448 316 aa11.78□□□□□ -0.52
DROSHA-220ENST00000513349 GOLGA6L22H0YM25 854 aa11.78□□□□□ -0.52
DROSHA-220ENST00000513349 RGS3P49796 1198 aa11.77□□□□□ -0.53
DROSHA-220ENST00000513349 SENP3-EIF4A1A0A087X0R7 540 aa11.76□□□□□ -0.53
DROSHA-220ENST00000513349 L3MBTL2Q969R5 705 aa11.76□□□□□ -0.53
DROSHA-220ENST00000513349 NAP1L5Q96NT1 182 aaPredicted RBP11.75□□□□□ -0.53
DROSHA-220ENST00000513349 ERICH3Q5RHP9 1530 aa11.75□□□□□ -0.53
DROSHA-220ENST00000513349 KTN1Q86UP2 1357 aaKnown RBP11.75□□□□□ -0.53
DROSHA-220ENST00000513349 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.74□□□□□ -0.531e-7■■■□□ 17.2
DROSHA-220ENST00000513349 CCDC18Q5T9S5 1454 aa11.74□□□□□ -0.53
DROSHA-220ENST00000513349 MS4A1P11836 297 aa11.74□□□□□ -0.53
DROSHA-220ENST00000513349 ATAD2BQ9ULI0 1458 aa11.73□□□□□ -0.53
DROSHA-220ENST00000513349 ARID4BQ4LE39 1312 aaPredicted RBP11.73□□□□□ -0.53
DROSHA-220ENST00000513349 PLEKHD1A6NEE1 506 aa11.72□□□□□ -0.53
DROSHA-220ENST00000513349 SLC24A1O60721 1099 aa11.71□□□□□ -0.53
DROSHA-220ENST00000513349 PDE4AP27815 886 aa11.71□□□□□ -0.54
DROSHA-220ENST00000513349 UACAQ9BZF9 1416 aa11.71□□□□□ -0.54
DROSHA-220ENST00000513349 TMF1P82094 1093 aa11.71□□□□□ -0.54
DROSHA-220ENST00000513349 NLRP13Q86W25 1043 aa11.7□□□□□ -0.54
DROSHA-220ENST00000513349 CNTLNQ9NXG0 1405 aa11.7□□□□□ -0.54
DROSHA-220ENST00000513349 RGL3Q3MIN7 710 aa11.69□□□□□ -0.54
DROSHA-220ENST00000513349 PHLDB1Q86UU1 1377 aa11.69□□□□□ -0.54
DROSHA-220ENST00000513349 FHOD3Q2V2M9 1422 aa11.69□□□□□ -0.54
DROSHA-220ENST00000513349 GSE1Q14687 1217 aa11.69□□□□□ -0.54
DROSHA-220ENST00000513349 KIF15Q9NS87 1388 aa11.69□□□□□ -0.54
DROSHA-220ENST00000513349 LRRC9Q6ZRR7 1453 aa11.68□□□□□ -0.54
DROSHA-220ENST00000513349 CFAP53Q96M91 514 aa11.68□□□□□ -0.54
DROSHA-220ENST00000513349 MYH16Q9H6N6 1097 aa11.68□□□□□ -0.54
DROSHA-220ENST00000513349 CC2D1BQ5T0F9 858 aaKnown RBP11.68□□□□□ -0.54
DROSHA-220ENST00000513349 RSPH6AQ9H0K4 717 aa11.68□□□□□ -0.54
DROSHA-220ENST00000513349 DCAF11Q8TEB1 546 aa11.67□□□□□ -0.54
DROSHA-220ENST00000513349 RRP1P56182 461 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms