RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 PIP4P2Q8N4L2 257 aa11.14□□□□□ -0.63
CHD1-208ENST00000512392 PRKAR2AP13861 404 aaKnown RBP11.13□□□□□ -0.63
CHD1-208ENST00000512392 MNX1P50219 401 aaPredicted RBP11.13□□□□□ -0.63
CHD1-208ENST00000512392 CHADLQ6NUI6 762 aa11.13□□□□□ -0.63
CHD1-208ENST00000512392 TMEM132AQ24JP5 1023 aa11.12□□□□□ -0.63
CHD1-208ENST00000512392 NPM1P06748 294 aaKnown RBP eCLIP11.08□□□□□ -0.64
CHD1-208ENST00000512392 ERICH6Q7L0X2 663 aa11.08□□□□□ -0.64
CHD1-208ENST00000512392 FARP1Q9Y4F1 1045 aaPredicted RBP11.07□□□□□ -0.64
CHD1-208ENST00000512392 NUBP1P53384 320 aa11.04□□□□□ -0.64
CHD1-208ENST00000512392 C14orf37Q86TY3 774 aa11□□□□□ -0.65
CHD1-208ENST00000512392 DCAF8L2P0C7V8 631 aa10.98□□□□□ -0.65
CHD1-208ENST00000512392 GSE1Q14687 1217 aa10.96□□□□□ -0.65
CHD1-208ENST00000512392 PKD2Q13563 968 aa10.96□□□□□ -0.66
CHD1-208ENST00000512392 PELP1Q8IZL8 1130 aaKnown RBP10.96□□□□□ -0.66
CHD1-208ENST00000512392 RASEFQ8IZ41 740 aa10.95□□□□□ -0.66
CHD1-208ENST00000512392 FAM212AQ96EL1 285 aa10.95□□□□□ -0.66
CHD1-208ENST00000512392 CIZ1Q9ULV3 898 aaPredicted RBP10.95□□□□□ -0.66
CHD1-208ENST00000512392 DCAF8Q5TAQ9 597 aa10.94□□□□□ -0.66
CHD1-208ENST00000512392 TRIM41Q8WV44 630 aa10.9□□□□□ -0.66
CHD1-208ENST00000512392 TTBK1Q5TCY1 1321 aaPredicted RBP10.9□□□□□ -0.66
CHD1-208ENST00000512392 NPM2Q86SE8 214 aaKnown RBP10.88□□□□□ -0.67
CHD1-208ENST00000512392 ECM2O94769 699 aaPredicted RBP10.87□□□□□ -0.67
CHD1-208ENST00000512392 TSPYL2Q9H2G4 693 aaPredicted RBP10.86□□□□□ -0.67
CHD1-208ENST00000512392 PAK3O75914 559 aaPredicted RBP10.85□□□□□ -0.67
CHD1-208ENST00000512392 SUPT5HO00267 1087 aaKnown RBP10.85□□□□□ -0.67
CHD1-208ENST00000512392 CHRM1P11229 460 aaPredicted RBP10.82□□□□□ -0.68
CHD1-208ENST00000512392 CD44P16070 742 aaKnown RBP10.82□□□□□ -0.68
CHD1-208ENST00000512392 C19orf67A6NJJ6 358 aa10.81□□□□□ -0.68
CHD1-208ENST00000512392 TRIM26Q12899 539 aaPredicted RBP10.81□□□□□ -0.68
CHD1-208ENST00000512392 POTEHQ6S545 545 aa10.79□□□□□ -0.68
CHD1-208ENST00000512392 CCDC61Q9Y6R9 512 aa10.79□□□□□ -0.68
CHD1-208ENST00000512392 ZRANB1Q9UGI0 708 aa10.77□□□□□ -0.68
CHD1-208ENST00000512392 PYGBP11216 843 aa10.76□□□□□ -0.69
CHD1-208ENST00000512392 HAX1O00165 279 aa10.75□□□□□ -0.69
CHD1-208ENST00000512392 PAXIP1Q6ZW49 1069 aaPredicted RBP10.75□□□□□ -0.69
CHD1-208ENST00000512392 RGL2O15211 777 aa10.74□□□□□ -0.69
CHD1-208ENST00000512392 UBTFP17480 764 aaKnown RBP10.73□□□□□ -0.69
CHD1-208ENST00000512392 MYT1Q01538 1121 aa10.73□□□□□ -0.69
CHD1-208ENST00000512392 HRCP23327 699 aa10.72□□□□□ -0.69
CHD1-208ENST00000512392 CFAP44Q96MT7 982 aa10.72□□□□□ -0.69
CHD1-208ENST00000512392 TSHZ2Q9NRE2 1034 aa10.72□□□□□ -0.69
CHD1-208ENST00000512392 ZNF579Q8NAF0 562 aaKnown RBP10.7□□□□□ -0.7
CHD1-208ENST00000512392 RIOK3O14730 519 aaKnown RBP10.68□□□□□ -0.7
CHD1-208ENST00000512392 RNF25Q96BH1 459 aaPredicted RBP10.68□□□□□ -0.7
CHD1-208ENST00000512392 KIF12Q96FN5 646 aa10.68□□□□□ -0.7
CHD1-208ENST00000512392 SGIP1Q9BQI5 828 aa10.68□□□□□ -0.7
CHD1-208ENST00000512392 PHF12Q96QT6 1004 aa10.66□□□□□ -0.7
CHD1-208ENST00000512392 NBR1Q14596 966 aa10.66□□□□□ -0.7
CHD1-208ENST00000512392 ZNF467Q7Z7K2 595 aaPredicted RBP10.66□□□□□ -0.7
CHD1-208ENST00000512392 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.66□□□□□ -0.7
CHD1-208ENST00000512392 BBXQ8WY36 941 aaPredicted RBP10.65□□□□□ -0.7
CHD1-208ENST00000512392 MAP3K13O43283 966 aa10.65□□□□□ -0.71
CHD1-208ENST00000512392 EVX2Q03828 476 aa10.65□□□□□ -0.71
CHD1-208ENST00000512392 PCDHB13Q9Y5F0 798 aa10.63□□□□□ -0.71
CHD1-208ENST00000512392 VGFO15240 615 aaPredicted RBP10.63□□□□□ -0.71
CHD1-208ENST00000512392 CLCN6P51797 869 aa10.61□□□□□ -0.71
CHD1-208ENST00000512392 PCDHB8Q9UN66 801 aa10.6□□□□□ -0.71
CHD1-208ENST00000512392 IFNL1Q8IU54 200 aa10.59□□□□□ -0.71
CHD1-208ENST00000512392 PDAP1Q13442 181 aaKnown RBP10.56□□□□□ -0.72
CHD1-208ENST00000512392 CHGAP10645 457 aaKnown RBP10.56□□□□□ -0.72
CHD1-208ENST00000512392 HS6ST3Q8IZP7 471 aa10.55□□□□□ -0.72
CHD1-208ENST00000512392 MS4A3Q96HJ5 214 aa10.55□□□□□ -0.72
CHD1-208ENST00000512392 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.54□□□□□ -0.72
CHD1-208ENST00000512392 ZFP91Q96JP5 570 aaPredicted RBP10.54□□□□□ -0.72
CHD1-208ENST00000512392 PSEN1P49768 467 aa10.53□□□□□ -0.72
CHD1-208ENST00000512392 STK25O00506 426 aa10.51□□□□□ -0.73
CHD1-208ENST00000512392 LOC105371045A0A1W2PR82 267 aa10.5□□□□□ -0.73
CHD1-208ENST00000512392 GALR2O43603 387 aaPredicted RBP10.49□□□□□ -0.73
CHD1-208ENST00000512392 EIF5BO60841 1220 aaKnown RBP10.49□□□□□ -0.73
CHD1-208ENST00000512392 BCL11BQ9C0K0 894 aaPredicted RBP10.49□□□□□ -0.73
CHD1-208ENST00000512392 DNAJC5Q9H3Z4 198 aa10.49□□□□□ -0.73
CHD1-208ENST00000512392 GABBR2O75899 941 aa10.48□□□□□ -0.73
CHD1-208ENST00000512392 STK24Q9Y6E0 443 aa10.48□□□□□ -0.73
CHD1-208ENST00000512392 SPRYD3Q8NCJ5 442 aa10.46□□□□□ -0.73
CHD1-208ENST00000512392 TIE1P35590 1138 aa10.46□□□□□ -0.74
CHD1-208ENST00000512392 TRPC6Q9Y210 931 aa10.46□□□□□ -0.74
CHD1-208ENST00000512392 SP7Q8TDD2 431 aaPredicted RBP10.44□□□□□ -0.74
CHD1-208ENST00000512392 TMEM106CQ9BVX2 250 aa10.43□□□□□ -0.74
CHD1-208ENST00000512392 BMP2KQ9NSY1 1161 aaPredicted RBP10.4□□□□□ -0.74
CHD1-208ENST00000512392 TTLL13PA6NNM8 815 aa10.39□□□□□ -0.75
CHD1-208ENST00000512392 CABP2Q9NPB3 220 aa10.38□□□□□ -0.75
CHD1-208ENST00000512392 NKX1-1Q15270 411 aaPredicted RBP10.37□□□□□ -0.75
CHD1-208ENST00000512392 GOLGA2Q08379 1002 aa10.35□□□□□ -0.75
CHD1-208ENST00000512392 ASTLQ6HA08 431 aaPredicted RBP10.35□□□□□ -0.75
CHD1-208ENST00000512392 ATMINO43313 823 aaPredicted RBP10.34□□□□□ -0.75
CHD1-208ENST00000512392 EFCAB3Q8N7B9 438 aa10.34□□□□□ -0.75
CHD1-208ENST00000512392 DCBLD2Q96PD2 775 aa10.34□□□□□ -0.75
CHD1-208ENST00000512392 SOX12O15370 315 aa10.34□□□□□ -0.75
CHD1-208ENST00000512392 RYDENQ9NUL5 291 aaKnown RBP10.33□□□□□ -0.76
CHD1-208ENST00000512392 ATN1P54259 1190 aaPredicted RBP10.32□□□□□ -0.76
CHD1-208ENST00000512392 TRIM35Q9UPQ4 493 aa10.32□□□□□ -0.76
CHD1-208ENST00000512392 MKRN3Q13064 507 aaKnown RBP10.31□□□□□ -0.76
CHD1-208ENST00000512392 GTPBP6O43824 516 aaPredicted RBP10.3□□□□□ -0.76
CHD1-208ENST00000512392 BRPF1P55201 1214 aaPredicted RBP10.3□□□□□ -0.76
CHD1-208ENST00000512392 NLRP6P59044 892 aa10.28□□□□□ -0.76
CHD1-208ENST00000512392 MFRPQ9BY79 579 aa10.28□□□□□ -0.76
CHD1-208ENST00000512392 IER5LQ5T953 404 aa10.26□□□□□ -0.77
CHD1-208ENST00000512392 PHF8Q9UPP1 1060 aa10.25□□□□□ -0.77
CHD1-208ENST00000512392 POTEIP0CG38 1075 aa10.25□□□□□ -0.77
CHD1-208ENST00000512392 FBXO22Q8NEZ5 403 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms