RNA–Protein interactions for RNA: ENST00000512309.1

COPB2-210, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 5

Gene COPB2, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-210ENST00000512309 CSRNP3Q8WYN3 585 aa14.41□□□□□ -0.1
COPB2-210ENST00000512309 ATMINO43313 823 aaPredicted RBP14.4□□□□□ -0.1
COPB2-210ENST00000512309 MNX1P50219 401 aaPredicted RBP14.4□□□□□ -0.1
COPB2-210ENST00000512309 SLC39A7Q92504 469 aa14.4□□□□□ -0.1
COPB2-210ENST00000512309 C7P10643 843 aa14.38□□□□□ -0.11
COPB2-210ENST00000512309 LCE2DQ5TA82 110 aaPredicted RBP14.37□□□□□ -0.11
COPB2-210ENST00000512309 SPDYE4A6NLX3 237 aa14.35□□□□□ -0.11
COPB2-210ENST00000512309 MAMSTRQ6ZN01 415 aa14.34□□□□□ -0.11
COPB2-210ENST00000512309 FAM163AQ96GL9 167 aaPredicted RBP14.33□□□□□ -0.12
COPB2-210ENST00000512309 SCUBE2Q9NQ36 999 aa14.26□□□□□ -0.13
COPB2-210ENST00000512309 ATN1P54259 1190 aaPredicted RBP14.25□□□□□ -0.13
COPB2-210ENST00000512309 TSPYL2Q9H2G4 693 aaPredicted RBP14.22□□□□□ -0.13
COPB2-210ENST00000512309 POTEFA5A3E0 1075 aa14.17□□□□□ -0.14
COPB2-210ENST00000512309 CCDC61Q9Y6R9 512 aa14.15□□□□□ -0.14
COPB2-210ENST00000512309 BMP2KQ9NSY1 1161 aaPredicted RBP14.12□□□□□ -0.15
COPB2-210ENST00000512309 TRPC6Q9Y210 931 aa14.12□□□□□ -0.15
COPB2-210ENST00000512309 KIF12Q96FN5 646 aa14.1□□□□□ -0.15
COPB2-210ENST00000512309 CDAN1Q8IWY9 1227 aa14.04□□□□□ -0.16
COPB2-210ENST00000512309 COLQQ9Y215 455 aaPredicted RBP14.02□□□□□ -0.17
COPB2-210ENST00000512309 MAP3K13O43283 966 aa14.01□□□□□ -0.17
COPB2-210ENST00000512309 TIE1P35590 1138 aa13.99□□□□□ -0.17
COPB2-210ENST00000512309 SEC24BO95487 1268 aa13.98□□□□□ -0.17
COPB2-210ENST00000512309 TTLL13PA6NNM8 815 aa13.94□□□□□ -0.18
COPB2-210ENST00000512309 RASEFQ8IZ41 740 aa13.89□□□□□ -0.19
COPB2-210ENST00000512309 ST18O60284 1047 aa13.86□□□□□ -0.19
COPB2-210ENST00000512309 TRIM35Q9UPQ4 493 aa13.86□□□□□ -0.19
COPB2-210ENST00000512309 PROM2Q8N271 834 aa13.85□□□□□ -0.19
COPB2-210ENST00000512309 SLAIN1Q8ND83 568 aa13.85□□□□□ -0.19
COPB2-210ENST00000512309 IER5LQ5T953 404 aa13.82□□□□□ -0.2
COPB2-210ENST00000512309 PLEKHG5O94827 1062 aa13.77□□□□□ -0.21
COPB2-210ENST00000512309 MIER1Q8N108 512 aa13.77□□□□□ -0.21
COPB2-210ENST00000512309 PCDHB13Q9Y5F0 798 aa13.77□□□□□ -0.21
COPB2-210ENST00000512309 MMRN1Q13201 1228 aa13.75□□□□□ -0.21
COPB2-210ENST00000512309 SPNS2Q8IVW8 549 aa13.71□□□□□ -0.21
COPB2-210ENST00000512309 SGIP1Q9BQI5 828 aa13.7□□□□□ -0.22
COPB2-210ENST00000512309 PLCG2P16885 1265 aa13.68□□□□□ -0.22
COPB2-210ENST00000512309 IFNL1Q8IU54 200 aa13.68□□□□□ -0.22
COPB2-210ENST00000512309 TMEM106CQ9BVX2 250 aa13.66□□□□□ -0.22
COPB2-210ENST00000512309 IRX5P78411 483 aaPredicted RBP13.61□□□□□ -0.23
COPB2-210ENST00000512309 TMEM121BQ9BXQ6 578 aaPredicted RBP13.61□□□□□ -0.23
COPB2-210ENST00000512309 MARVELD3Q96A59 401 aa13.6□□□□□ -0.23
COPB2-210ENST00000512309 PLCD3Q8N3E9 789 aa13.59□□□□□ -0.23
COPB2-210ENST00000512309 NUBP1P53384 320 aa13.57□□□□□ -0.24
COPB2-210ENST00000512309 SNPHO15079 494 aa13.52□□□□□ -0.25
COPB2-210ENST00000512309 OCEL1Q9H607 264 aa13.51□□□□□ -0.25
COPB2-210ENST00000512309 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.51□□□□□ -0.25
COPB2-210ENST00000512309 FAM212AQ96EL1 285 aa13.49□□□□□ -0.25
COPB2-210ENST00000512309 ZBTB47Q9UFB7 747 aaPredicted RBP13.46□□□□□ -0.25
COPB2-210ENST00000512309 EMP3P54852 163 aa13.42□□□□□ -0.26
COPB2-210ENST00000512309 KRTAP3-3Q9BYR6 98 aa13.38□□□□□ -0.27
COPB2-210ENST00000512309 KRTAP3-2Q9BYR7 98 aa13.38□□□□□ -0.27
COPB2-210ENST00000512309 PYGBP11216 843 aa13.37□□□□□ -0.27
COPB2-210ENST00000512309 POTEB3A0JP26 581 aa13.36□□□□□ -0.27
COPB2-210ENST00000512309 POTEBQ6S5H4 581 aa13.36□□□□□ -0.27
COPB2-210ENST00000512309 PCDHB8Q9UN66 801 aa13.36□□□□□ -0.27
COPB2-210ENST00000512309 HS3ST6Q96QI5 342 aa13.35□□□□□ -0.27
COPB2-210ENST00000512309 C3orf67Q6ZVT6 689 aa13.33□□□□□ -0.28
COPB2-210ENST00000512309 FAM205CA6NFA0 338 aa13.32□□□□□ -0.28
COPB2-210ENST00000512309 PDCD7Q8N8D1 485 aaKnown RBP13.31□□□□□ -0.28
COPB2-210ENST00000512309 DCAF8Q5TAQ9 597 aa13.3□□□□□ -0.28
COPB2-210ENST00000512309 L3MBTL3Q96JM7 780 aaPredicted RBP13.22□□□□□ -0.29
COPB2-210ENST00000512309 GOLGA2Q08379 1002 aa13.19□□□□□ -0.3
COPB2-210ENST00000512309 MKRN3Q13064 507 aaKnown RBP13.19□□□□□ -0.3
COPB2-210ENST00000512309 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.16□□□□□ -0.32e-7■■□□□ 13.6
COPB2-210ENST00000512309 ZNF467Q7Z7K2 595 aaPredicted RBP13.1□□□□□ -0.31
COPB2-210ENST00000512309 HOXB3P14651 431 aaPredicted RBP13.07□□□□□ -0.32
COPB2-210ENST00000512309 DPY19L2Q6NUT2 758 aa13.07□□□□□ -0.32
COPB2-210ENST00000512309 RNF166Q96A37 237 aaPredicted RBP13.06□□□□□ -0.32
COPB2-210ENST00000512309 PSEN1P49768 467 aa13.04□□□□□ -0.32
COPB2-210ENST00000512309 FKBP8Q14318 412 aa13.03□□□□□ -0.32
COPB2-210ENST00000512309 HOXB1P14653 301 aaPredicted RBP13.01□□□□□ -0.33
COPB2-210ENST00000512309 ERBB3P21860 1342 aa13.01□□□□□ -0.33
COPB2-210ENST00000512309 ILDR1Q86SU0 546 aaPredicted RBP13□□□□□ -0.33
COPB2-210ENST00000512309 ZNF710Q8N1W2 664 aa13□□□□□ -0.33
COPB2-210ENST00000512309 GSE1Q14687 1217 aa12.97□□□□□ -0.33
COPB2-210ENST00000512309 BOLA1Q9Y3E2 137 aa12.97□□□□□ -0.33
COPB2-210ENST00000512309 G3V3G9 751 aa12.96□□□□□ -0.33
COPB2-210ENST00000512309 MYT1LQ9UL68 1186 aa12.94□□□□□ -0.34
COPB2-210ENST00000512309 CHRM1P11229 460 aaPredicted RBP12.92□□□□□ -0.34
COPB2-210ENST00000512309 DOK7Q18PE1 504 aa12.92□□□□□ -0.34
COPB2-210ENST00000512309 VARS2Q5ST30 1063 aaKnown RBP12.92□□□□□ -0.34
COPB2-210ENST00000512309 CABP2Q9NPB3 220 aa12.91□□□□□ -0.34
COPB2-210ENST00000512309 KLHL34Q8N239 644 aa12.9□□□□□ -0.34
COPB2-210ENST00000512309 PDAP1Q13442 181 aaKnown RBP12.89□□□□□ -0.35
COPB2-210ENST00000512309 RIMBP2O15034 1052 aa12.83□□□□□ -0.36
COPB2-210ENST00000512309 FBXO3Q9UK99 471 aa12.83□□□□□ -0.36
COPB2-210ENST00000512309 ZNF687Q8N1G0 1237 aa12.8□□□□□ -0.36
COPB2-210ENST00000512309 VASPP50552 380 aaPredicted RBP12.76□□□□□ -0.37
COPB2-210ENST00000512309 TMEM92Q6UXU6 159 aa12.73□□□□□ -0.37
COPB2-210ENST00000512309 PTGER2P43116 358 aa12.72□□□□□ -0.37
COPB2-210ENST00000512309 GPR153Q6NV75 609 aa12.71□□□□□ -0.37
COPB2-210ENST00000512309 ANKRD13DQ6ZTN6 518 aa12.71□□□□□ -0.37
COPB2-210ENST00000512309 ZSWIM6Q9HCJ5 1215 aa12.71□□□□□ -0.37
COPB2-210ENST00000512309 MICALL2Q8IY33 904 aa12.67□□□□□ -0.38
COPB2-210ENST00000512309 EFCAB3Q8N7B9 438 aa12.67□□□□□ -0.38
COPB2-210ENST00000512309 CIZ1Q9ULV3 898 aaPredicted RBP12.66□□□□□ -0.38
COPB2-210ENST00000512309 AMER1Q5JTC6 1135 aaPredicted RBP12.64□□□□□ -0.39
COPB2-210ENST00000512309 ARSIQ5FYB1 569 aa12.62□□□□□ -0.39
COPB2-210ENST00000512309 LSM11P83369 360 aaKnown RBP eCLIP12.59□□□□□ -0.39
COPB2-210ENST00000512309 KHSRPQ92945 711 aaKnown RBP eCLIP12.58□□□□□ -0.45e-10■■■□□ 15.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms