RNA–Protein interactions for RNA: ENST00000509673.2

PGBD4P4-201, Transcript of piggyBac transposable element derived 4 pseudogene 4, humanhuman

BASIC

Gene PGBD4P4, Length 613 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4P4-201ENST00000509673 ASTLQ6HA08 431 aaPredicted RBP13.06□□□□□ -0.32
PGBD4P4-201ENST00000509673 FKBP8Q14318 412 aa13.02□□□□□ -0.33
PGBD4P4-201ENST00000509673 KIF12Q96FN5 646 aa13.02□□□□□ -0.33
PGBD4P4-201ENST00000509673 SLC39A7Q92504 469 aa13.01□□□□□ -0.33
PGBD4P4-201ENST00000509673 ATMINO43313 823 aaPredicted RBP13□□□□□ -0.33
PGBD4P4-201ENST00000509673 C7P10643 843 aa13□□□□□ -0.33
PGBD4P4-201ENST00000509673 PELP1Q8IZL8 1130 aaKnown RBP12.99□□□□□ -0.33
PGBD4P4-201ENST00000509673 RASEFQ8IZ41 740 aa12.98□□□□□ -0.33
PGBD4P4-201ENST00000509673 METRNQ9UJH8 293 aa12.97□□□□□ -0.33
PGBD4P4-201ENST00000509673 OTUD5Q96G74 571 aa12.93□□□□□ -0.34
PGBD4P4-201ENST00000509673 POTEB2H3BUK9 544 aa12.92□□□□□ -0.34
PGBD4P4-201ENST00000509673 MAP3K13O43283 966 aa12.92□□□□□ -0.34
PGBD4P4-201ENST00000509673 TIE1P35590 1138 aa12.9□□□□□ -0.34
PGBD4P4-201ENST00000509673 SGIP1Q9BQI5 828 aa12.9□□□□□ -0.34
PGBD4P4-201ENST00000509673 FBXO3Q9UK99 471 aa12.9□□□□□ -0.34
PGBD4P4-201ENST00000509673 ATN1P54259 1190 aaPredicted RBP12.89□□□□□ -0.35
PGBD4P4-201ENST00000509673 MAMSTRQ6ZN01 415 aa12.89□□□□□ -0.35
PGBD4P4-201ENST00000509673 NUBP1P53384 320 aa12.87□□□□□ -0.35
PGBD4P4-201ENST00000509673 FAM212AQ96EL1 285 aa12.87□□□□□ -0.35
PGBD4P4-201ENST00000509673 BMP2KQ9NSY1 1161 aaPredicted RBP12.87□□□□□ -0.35
PGBD4P4-201ENST00000509673 PCDHB13Q9Y5F0 798 aa12.82□□□□□ -0.36
PGBD4P4-201ENST00000509673 TRPC6Q9Y210 931 aa12.8□□□□□ -0.36
PGBD4P4-201ENST00000509673 TTLL13PA6NNM8 815 aa12.78□□□□□ -0.36
PGBD4P4-201ENST00000509673 SCUBE2Q9NQ36 999 aa12.78□□□□□ -0.36
PGBD4P4-201ENST00000509673 IER5LQ5T953 404 aa12.75□□□□□ -0.37
PGBD4P4-201ENST00000509673 SEC24BO95487 1268 aa12.73□□□□□ -0.37
PGBD4P4-201ENST00000509673 POTEJP0CG39 1038 aa12.73□□□□□ -0.37
PGBD4P4-201ENST00000509673 IFNL1Q8IU54 200 aa12.71□□□□□ -0.37
PGBD4P4-201ENST00000509673 DCAF8Q5TAQ9 597 aa12.7□□□□□ -0.38
PGBD4P4-201ENST00000509673 TRIM35Q9UPQ4 493 aa12.7□□□□□ -0.38
PGBD4P4-201ENST00000509673 POTEFA5A3E0 1075 aa12.68□□□□□ -0.38
PGBD4P4-201ENST00000509673 TMEM106CQ9BVX2 250 aa12.66□□□□□ -0.38
PGBD4P4-201ENST00000509673 VASPP50552 380 aaPredicted RBP12.65□□□□□ -0.38
PGBD4P4-201ENST00000509673 KLHL34Q8N239 644 aa12.64□□□□□ -0.39
PGBD4P4-201ENST00000509673 POTEMA6NI47 508 aa12.63□□□□□ -0.39
PGBD4P4-201ENST00000509673 COLQQ9Y215 455 aaPredicted RBP12.63□□□□□ -0.39
PGBD4P4-201ENST00000509673 GSE1Q14687 1217 aa12.61□□□□□ -0.39
PGBD4P4-201ENST00000509673 POTEGQ6S5H5 508 aa12.61□□□□□ -0.39
PGBD4P4-201ENST00000509673 PYGBP11216 843 aa12.6□□□□□ -0.39
PGBD4P4-201ENST00000509673 PLCG2P16885 1265 aa12.57□□□□□ -0.4
PGBD4P4-201ENST00000509673 PLSCR2Q9NRY7 297 aa12.57□□□□□ -0.4
PGBD4P4-201ENST00000509673 PCDH10Q9P2E7 1040 aa12.57□□□□□ -0.4
PGBD4P4-201ENST00000509673 ZNF467Q7Z7K2 595 aaPredicted RBP12.53□□□□□ -0.4
PGBD4P4-201ENST00000509673 FAM163AQ96GL9 167 aaPredicted RBP12.53□□□□□ -0.4
PGBD4P4-201ENST00000509673 PCDHB8Q9UN66 801 aa12.51□□□□□ -0.41
PGBD4P4-201ENST00000509673 IRX5P78411 483 aaPredicted RBP12.5□□□□□ -0.41
PGBD4P4-201ENST00000509673 CHRM1P11229 460 aaPredicted RBP12.49□□□□□ -0.41
PGBD4P4-201ENST00000509673 OCEL1Q9H607 264 aa12.49□□□□□ -0.41
PGBD4P4-201ENST00000509673 LCE2DQ5TA82 110 aaPredicted RBP12.44□□□□□ -0.42
PGBD4P4-201ENST00000509673 SLAIN1Q8ND83 568 aa12.44□□□□□ -0.42
PGBD4P4-201ENST00000509673 GOLGA2Q08379 1002 aa12.43□□□□□ -0.42
PGBD4P4-201ENST00000509673 SPOCK2Q92563 424 aa12.43□□□□□ -0.42
PGBD4P4-201ENST00000509673 MKRN3Q13064 507 aaKnown RBP12.39□□□□□ -0.43
PGBD4P4-201ENST00000509673 PSEN1P49768 467 aa12.36□□□□□ -0.43
PGBD4P4-201ENST00000509673 IFNLR1Q8IU57 520 aaPredicted RBP12.36□□□□□ -0.43
PGBD4P4-201ENST00000509673 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.36□□□□□ -0.43
PGBD4P4-201ENST00000509673 PDAP1Q13442 181 aaKnown RBP12.34□□□□□ -0.43
PGBD4P4-201ENST00000509673 CIZ1Q9ULV3 898 aaPredicted RBP12.34□□□□□ -0.43
PGBD4P4-201ENST00000509673 SNPHO15079 494 aa12.33□□□□□ -0.44
PGBD4P4-201ENST00000509673 L3MBTL3Q96JM7 780 aaPredicted RBP12.32□□□□□ -0.44
PGBD4P4-201ENST00000509673 PDCD7Q8N8D1 485 aaKnown RBP12.3□□□□□ -0.44
PGBD4P4-201ENST00000509673 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.29□□□□□ -0.44
PGBD4P4-201ENST00000509673 C3orf67Q6ZVT6 689 aa12.28□□□□□ -0.44
PGBD4P4-201ENST00000509673 TRIM41Q8WV44 630 aa12.28□□□□□ -0.44
PGBD4P4-201ENST00000509673 ST18O60284 1047 aa12.27□□□□□ -0.45
PGBD4P4-201ENST00000509673 TMEM121BQ9BXQ6 578 aaPredicted RBP12.27□□□□□ -0.45
PGBD4P4-201ENST00000509673 CDAN1Q8IWY9 1227 aa12.22□□□□□ -0.45
PGBD4P4-201ENST00000509673 ILDR1Q86SU0 546 aaPredicted RBP12.21□□□□□ -0.45
PGBD4P4-201ENST00000509673 CABP2Q9NPB3 220 aa12.19□□□□□ -0.46
PGBD4P4-201ENST00000509673 G3V3G9 751 aa12.18□□□□□ -0.46
PGBD4P4-201ENST00000509673 BOLA1Q9Y3E2 137 aa12.1□□□□□ -0.47
PGBD4P4-201ENST00000509673 DPY19L2Q6NUT2 758 aa12.07□□□□□ -0.48
PGBD4P4-201ENST00000509673 MARVELD3Q96A59 401 aa12.05□□□□□ -0.48
PGBD4P4-201ENST00000509673 RIOK3O14730 519 aaKnown RBP12.04□□□□□ -0.48
PGBD4P4-201ENST00000509673 EMP3P54852 163 aa12.03□□□□□ -0.48
PGBD4P4-201ENST00000509673 EFCAB3Q8N7B9 438 aa12.02□□□□□ -0.49
PGBD4P4-201ENST00000509673 VGFO15240 615 aaPredicted RBP12□□□□□ -0.49
PGBD4P4-201ENST00000509673 SOX12O15370 315 aa11.99□□□□□ -0.49
PGBD4P4-201ENST00000509673 TAOK2Q9UL54 1235 aa11.98□□□□□ -0.49
PGBD4P4-201ENST00000509673 DOK7Q18PE1 504 aa11.95□□□□□ -0.5
PGBD4P4-201ENST00000509673 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.94□□□□□ -0.5
PGBD4P4-201ENST00000509673 ZNF710Q8N1W2 664 aa11.94□□□□□ -0.5
PGBD4P4-201ENST00000509673 RNF25Q96BH1 459 aaPredicted RBP11.94□□□□□ -0.5
PGBD4P4-201ENST00000509673 ZFP91Q96JP5 570 aaPredicted RBP11.94□□□□□ -0.5
PGBD4P4-201ENST00000509673 RIMBP2O15034 1052 aa11.92□□□□□ -0.5
PGBD4P4-201ENST00000509673 HOXB3P14651 431 aaPredicted RBP11.91□□□□□ -0.5
PGBD4P4-201ENST00000509673 SPNS2Q8IVW8 549 aa11.91□□□□□ -0.5
PGBD4P4-201ENST00000509673 HS3ST6Q96QI5 342 aa11.91□□□□□ -0.5
PGBD4P4-201ENST00000509673 FAM205CA6NFA0 338 aa11.9□□□□□ -0.5
PGBD4P4-201ENST00000509673 MICALL2Q8IY33 904 aa11.9□□□□□ -0.5
PGBD4P4-201ENST00000509673 HOXB1P14653 301 aaPredicted RBP11.88□□□□□ -0.51
PGBD4P4-201ENST00000509673 MMRN1Q13201 1228 aa11.88□□□□□ -0.51
PGBD4P4-201ENST00000509673 NLRP6P59044 892 aa11.84□□□□□ -0.51
PGBD4P4-201ENST00000509673 ZSWIM6Q9HCJ5 1215 aa11.84□□□□□ -0.51
PGBD4P4-201ENST00000509673 PHF8Q9UPP1 1060 aa11.84□□□□□ -0.51
PGBD4P4-201ENST00000509673 MS4A4AQ96JQ5 239 aa11.83□□□□□ -0.52
PGBD4P4-201ENST00000509673 POTEB3A0JP26 581 aa11.81□□□□□ -0.52
PGBD4P4-201ENST00000509673 POTEBQ6S5H4 581 aa11.81□□□□□ -0.52
PGBD4P4-201ENST00000509673 BCL11BQ9C0K0 894 aaPredicted RBP11.81□□□□□ -0.52
PGBD4P4-201ENST00000509673 KRTAP3-3Q9BYR6 98 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms