RNA–Protein interactions for RNA: ENST00000508457.1

C4orf46-202, Transcript of chromosome 4 open reading frame 46, humanhuman

TSL 5 BASIC

Gene C4orf46, Length 3,358 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf46-202ENST00000508457 KLHL34Q8N239 644 aa12.49□□□□□ -0.41
C4orf46-202ENST00000508457 BCL11BQ9C0K0 894 aaPredicted RBP12.49□□□□□ -0.41
C4orf46-202ENST00000508457 ERCC6Q03468 1493 aa12.48□□□□□ -0.41
C4orf46-202ENST00000508457 FKBP8Q14318 412 aa12.48□□□□□ -0.41
C4orf46-202ENST00000508457 ABCC8Q09428 1581 aa12.47□□□□□ -0.41
C4orf46-202ENST00000508457 CLSPNQ9HAW4 1339 aa12.46□□□□□ -0.42
C4orf46-202ENST00000508457 GLIPR1L2Q4G1C9 344 aa12.46□□□□□ -0.42
C4orf46-202ENST00000508457 PDS5BQ9NTI5 1447 aa12.45□□□□□ -0.42
C4orf46-202ENST00000508457 UBTFP17480 764 aaKnown RBP12.44□□□□□ -0.42
C4orf46-202ENST00000508457 TOP2AP11388 1531 aaKnown RBP12.42□□□□□ -0.42
C4orf46-202ENST00000508457 MRC2Q9UBG0 1479 aa12.41□□□□□ -0.42
C4orf46-202ENST00000508457 NESP48681 1621 aa12.4□□□□□ -0.42
C4orf46-202ENST00000508457 RBM10P98175 930 aaKnown RBP12.39□□□□□ -0.43
C4orf46-202ENST00000508457 RTL5Q5HYW3 569 aaPredicted RBP12.39□□□□□ -0.43
C4orf46-202ENST00000508457 FGD1P98174 961 aa12.38□□□□□ -0.43
C4orf46-202ENST00000508457 CADPSQ9ULU8 1353 aa12.38□□□□□ -0.43
C4orf46-202ENST00000508457 CFTRP13569 1480 aa12.35□□□□□ -0.43
C4orf46-202ENST00000508457 SOGA1O94964 1423 aa12.33□□□□□ -0.44
C4orf46-202ENST00000508457 AAMPQ13685 434 aa12.31□□□□□ -0.44
C4orf46-202ENST00000508457 RUSC2Q8N2Y8 1516 aa12.29□□□□□ -0.44
C4orf46-202ENST00000508457 WDR97A6NE52 1622 aa12.29□□□□□ -0.44
C4orf46-202ENST00000508457 FANCIQ9NVI1 1328 aa12.29□□□□□ -0.44
C4orf46-202ENST00000508457 WRNQ14191 1432 aaPredicted RBP eCLIP12.28□□□□□ -0.44
C4orf46-202ENST00000508457 CEP164Q9UPV0 1460 aa12.27□□□□□ -0.44
C4orf46-202ENST00000508457 BRPF3Q9ULD4 1205 aa12.23□□□□□ -0.45
C4orf46-202ENST00000508457 CDK11AQ9UQ88 783 aaPredicted RBP12.22□□□□□ -0.45
C4orf46-202ENST00000508457 PAXIP1Q6ZW49 1069 aaPredicted RBP12.22□□□□□ -0.45
C4orf46-202ENST00000508457 ATP1B4Q9UN42 357 aaPredicted RBP12.22□□□□□ -0.45
C4orf46-202ENST00000508457 PAK3O75914 559 aaPredicted RBP12.21□□□□□ -0.45
C4orf46-202ENST00000508457 FANCD2Q9BXW9 1451 aa12.21□□□□□ -0.45
C4orf46-202ENST00000508457 NOP58Q9Y2X3 529 aaKnown RBP12.21□□□□□ -0.46
C4orf46-202ENST00000508457 P3H3Q8IVL6 736 aa12.2□□□□□ -0.46
C4orf46-202ENST00000508457 URB2Q14146 1524 aaKnown RBP12.16□□□□□ -0.46
C4orf46-202ENST00000508457 FBLN2P98095 1184 aa12.16□□□□□ -0.46
C4orf46-202ENST00000508457 RSPH6AQ9H0K4 717 aa12.15□□□□□ -0.47
C4orf46-202ENST00000508457 DHX37Q8IY37 1157 aaKnown RBP12.13□□□□□ -0.47
C4orf46-202ENST00000508457 IFT140Q96RY7 1462 aa12.13□□□□□ -0.47
C4orf46-202ENST00000508457 DNMBPQ6XZF7 1577 aa12.12□□□□□ -0.47
C4orf46-202ENST00000508457 IRX6P78412 446 aaPredicted RBP12.11□□□□□ -0.47
C4orf46-202ENST00000508457 ARID3CA6NKF2 412 aa12.11□□□□□ -0.47
C4orf46-202ENST00000508457 TAF7LQ5H9L4 462 aa12.1□□□□□ -0.47
C4orf46-202ENST00000508457 SYNJ1O43426 1573 aa12.1□□□□□ -0.47
C4orf46-202ENST00000508457 KCNH8Q96L42 1107 aa12.1□□□□□ -0.47
C4orf46-202ENST00000508457 TDRD9Q8NDG6 1382 aaKnown RBP12.1□□□□□ -0.47
C4orf46-202ENST00000508457 NEFMP07197 916 aa12.09□□□□□ -0.47
C4orf46-202ENST00000508457 TARBP1Q13395 1621 aaKnown RBP12.09□□□□□ -0.47
C4orf46-202ENST00000508457 HSP90AA2PQ14568 343 aaPredicted RBP12.07□□□□□ -0.48
C4orf46-202ENST00000508457 NCBP3Q53F19 620 aaKnown RBP12.07□□□□□ -0.48
C4orf46-202ENST00000508457 RAD54L2Q9Y4B4 1467 aa12.07□□□□□ -0.48
C4orf46-202ENST00000508457 CHMP4BQ9H444 224 aaKnown RBP12.06□□□□□ -0.48
C4orf46-202ENST00000508457 TOPBP1Q92547 1522 aa12.04□□□□□ -0.48
C4orf46-202ENST00000508457 LAS1LQ9Y4W2 734 aaKnown RBP12.03□□□□□ -0.48
C4orf46-202ENST00000508457 ARID4BQ4LE39 1312 aaPredicted RBP12.03□□□□□ -0.48
C4orf46-202ENST00000508457 C11orf95C9JLR9 678 aaPredicted RBP12.03□□□□□ -0.48
C4orf46-202ENST00000508457 EIF4G3O43432 1585 aaKnown RBP12.02□□□□□ -0.48
C4orf46-202ENST00000508457 CUX1P39880 1505 aa12.01□□□□□ -0.49
C4orf46-202ENST00000508457 NAP1L2Q9ULW6 460 aaPredicted RBP12□□□□□ -0.49
C4orf46-202ENST00000508457 BBXQ8WY36 941 aaPredicted RBP12□□□□□ -0.49
C4orf46-202ENST00000508457 ZBTB47Q9UFB7 747 aaPredicted RBP11.99□□□□□ -0.49
C4orf46-202ENST00000508457 TRIM52Q96A61 297 aa11.99□□□□□ -0.49
C4orf46-202ENST00000508457 RIMBP3CA6NJZ7 1639 aa11.99□□□□□ -0.49
C4orf46-202ENST00000508457 RIMBP3BA6NNM3 1639 aa11.99□□□□□ -0.49
C4orf46-202ENST00000508457 RIMBP3Q9UFD9 1639 aa11.99□□□□□ -0.49
C4orf46-202ENST00000508457 RGS3P49796 1198 aa11.98□□□□□ -0.49
C4orf46-202ENST00000508457 HAP1P54257 671 aaPredicted RBP11.98□□□□□ -0.49
C4orf46-202ENST00000508457 NAP1L5Q96NT1 182 aaPredicted RBP11.98□□□□□ -0.49
C4orf46-202ENST00000508457 FGD5Q6ZNL6 1462 aa11.97□□□□□ -0.49
C4orf46-202ENST00000508457 RAPGEF2Q9Y4G8 1499 aa11.97□□□□□ -0.49
C4orf46-202ENST00000508457 CHD1O14646 1710 aa11.95□□□□□ -0.5
C4orf46-202ENST00000508457 CLASP1Q7Z460 1538 aa11.94□□□□□ -0.5
C4orf46-202ENST00000508457 KIF27Q86VH2 1401 aa11.94□□□□□ -0.5
C4orf46-202ENST00000508457 ANP32AP39687 249 aaKnown RBP11.93□□□□□ -0.5
C4orf46-202ENST00000508457 PLPPR3Q6T4P5 718 aa11.93□□□□□ -0.5
C4orf46-202ENST00000508457 CEP162Q5TB80 1403 aa11.93□□□□□ -0.5
C4orf46-202ENST00000508457 CHMP4AQ9BY43 222 aa11.93□□□□□ -0.5
C4orf46-202ENST00000508457 HNRNPUL2Q1KMD3 747 aaKnown RBP11.93□□□□□ -0.5
C4orf46-202ENST00000508457 HSP90AA1P07900 732 aaKnown RBP11.92□□□□□ -0.5
C4orf46-202ENST00000508457 AQRO60306 1485 aaKnown RBP eCLIP11.91□□□□□ -0.5
C4orf46-202ENST00000508457 NPM2Q86SE8 214 aaKnown RBP11.9□□□□□ -0.5
C4orf46-202ENST00000508457 CARMIL1Q5VZK9 1371 aa11.89□□□□□ -0.51
C4orf46-202ENST00000508457 AMER1Q5JTC6 1135 aaPredicted RBP11.89□□□□□ -0.51
C4orf46-202ENST00000508457 USP35Q9P2H5 1018 aa11.89□□□□□ -0.51
C4orf46-202ENST00000508457 IGF1RP08069 1367 aa11.89□□□□□ -0.51
C4orf46-202ENST00000508457 PLCD3Q8N3E9 789 aa11.88□□□□□ -0.51
C4orf46-202ENST00000508457 MAGI1Q96QZ7 1491 aaPredicted RBP11.88□□□□□ -0.51
C4orf46-202ENST00000508457 ARHGEF11O15085 1522 aa11.88□□□□□ -0.51
C4orf46-202ENST00000508457 POLA1P09884 1462 aaPredicted RBP11.87□□□□□ -0.51
C4orf46-202ENST00000508457 ARXQ96QS3 562 aa11.87□□□□□ -0.51
C4orf46-202ENST00000508457 ABCA5Q8WWZ7 1642 aa11.87□□□□□ -0.51
C4orf46-202ENST00000508457 PBRM1Q86U86 1689 aa11.87□□□□□ -0.51
C4orf46-202ENST00000508457 GOLGA3Q08378 1498 aa11.87□□□□□ -0.51
C4orf46-202ENST00000508457 CLIP1P30622 1438 aa11.86□□□□□ -0.51
C4orf46-202ENST00000508457 ZNF608Q9ULD9 1512 aaPredicted RBP11.86□□□□□ -0.51
C4orf46-202ENST00000508457 RRP9O43818 475 aaKnown RBP11.86□□□□□ -0.51
C4orf46-202ENST00000508457 OSCARQ8IYS5 282 aa11.86□□□□□ -0.51
C4orf46-202ENST00000508457 CHMP7Q8WUX9 453 aaPredicted RBP11.85□□□□□ -0.51
C4orf46-202ENST00000508457 IPO9Q96P70 1041 aaKnown RBP11.85□□□□□ -0.51
C4orf46-202ENST00000508457 BIVM-ERCC5R4GMW8 1640 aa11.85□□□□□ -0.51
C4orf46-202ENST00000508457 TOP2BQ02880 1626 aa11.84□□□□□ -0.51
C4orf46-202ENST00000508457 WASHC2AQ641Q2 1341 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms