RNA–Protein interactions for RNA: ENST00000508358.1

AC004063.1-201, humanhuman

TSL 4 BASIC

Gene AC004063.1, Length 547 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004063.1-201ENST00000508358 PLCD3Q8N3E9 789 aa13.59□□□□□ -0.23
AC004063.1-201ENST00000508358 RTN4Q9NQC3 1192 aaKnown RBP13.59□□□□□ -0.23
AC004063.1-201ENST00000508358 FARP1Q9Y4F1 1045 aaPredicted RBP13.59□□□□□ -0.23
AC004063.1-201ENST00000508358 IFNLR1Q8IU57 520 aaPredicted RBP13.58□□□□□ -0.24
AC004063.1-201ENST00000508358 MIER1Q8N108 512 aa13.58□□□□□ -0.24
AC004063.1-201ENST00000508358 CD44P16070 742 aaKnown RBP13.53□□□□□ -0.24
AC004063.1-201ENST00000508358 CLCN6P51797 869 aa13.53□□□□□ -0.24
AC004063.1-201ENST00000508358 KLHL34Q8N239 644 aa13.52□□□□□ -0.25
AC004063.1-201ENST00000508358 PLEKHG5O94827 1062 aa13.5□□□□□ -0.25
AC004063.1-201ENST00000508358 ERCC6Q03468 1493 aa13.42□□□□□ -0.26
AC004063.1-201ENST00000508358 SPOCK2Q92563 424 aa13.41□□□□□ -0.26
AC004063.1-201ENST00000508358 ZBTB47Q9UFB7 747 aaPredicted RBP13.41□□□□□ -0.26
AC004063.1-201ENST00000508358 CUX2O14529 1486 aa13.41□□□□□ -0.26
AC004063.1-201ENST00000508358 CREBZFQ9NS37 354 aa13.4□□□□□ -0.26
AC004063.1-201ENST00000508358 LHX8Q68G74 356 aa13.36□□□□□ -0.27
AC004063.1-201ENST00000508358 ZRANB1Q9UGI0 708 aa13.33□□□□□ -0.28
AC004063.1-201ENST00000508358 ZNF579Q8NAF0 562 aaKnown RBP13.32□□□□□ -0.28
AC004063.1-201ENST00000508358 PAK3O75914 559 aaPredicted RBP13.29□□□□□ -0.28
AC004063.1-201ENST00000508358 DCBLD2Q96PD2 775 aa13.29□□□□□ -0.28
AC004063.1-201ENST00000508358 NPM1P06748 294 aaKnown RBP eCLIP13.28□□□□□ -0.28
AC004063.1-201ENST00000508358 NCAPD3P42695 1498 aa13.25□□□□□ -0.29
AC004063.1-201ENST00000508358 POTEIP0CG38 1075 aa13.25□□□□□ -0.29
AC004063.1-201ENST00000508358 MNX1P50219 401 aaPredicted RBP13.24□□□□□ -0.29
AC004063.1-201ENST00000508358 PKD2Q13563 968 aa13.21□□□□□ -0.29
AC004063.1-201ENST00000508358 ATAD2BQ9ULI0 1458 aa13.18□□□□□ -0.3
AC004063.1-201ENST00000508358 CIZ1Q9ULV3 898 aaPredicted RBP13.18□□□□□ -0.3
AC004063.1-201ENST00000508358 NESP48681 1621 aa13.17□□□□□ -0.3
AC004063.1-201ENST00000508358 NUBP1P53384 320 aa13.17□□□□□ -0.3
AC004063.1-201ENST00000508358 TRIM41Q8WV44 630 aa13.17□□□□□ -0.3
AC004063.1-201ENST00000508358 SMARCA2P51531 1590 aa13.15□□□□□ -0.3
AC004063.1-201ENST00000508358 HMGXB3Q12766 1538 aa13.12□□□□□ -0.31
AC004063.1-201ENST00000508358 GALR2O43603 387 aaPredicted RBP13.11□□□□□ -0.31
AC004063.1-201ENST00000508358 ECM2O94769 699 aaPredicted RBP13.11□□□□□ -0.31
AC004063.1-201ENST00000508358 DCAF8Q5TAQ9 597 aa13.11□□□□□ -0.31
AC004063.1-201ENST00000508358 GSE1Q14687 1217 aa13.1□□□□□ -0.31
AC004063.1-201ENST00000508358 SMARCA4P51532 1647 aa13.1□□□□□ -0.31
AC004063.1-201ENST00000508358 FAM212AQ96EL1 285 aa13.09□□□□□ -0.31
AC004063.1-201ENST00000508358 BAZ1BQ9UIG0 1483 aaKnown RBP13.09□□□□□ -0.31
AC004063.1-201ENST00000508358 RASEFQ8IZ41 740 aa13.08□□□□□ -0.32
AC004063.1-201ENST00000508358 PHF12Q96QT6 1004 aa13.07□□□□□ -0.32
AC004063.1-201ENST00000508358 THOC2Q8NI27 1593 aaKnown RBP13.04□□□□□ -0.32
AC004063.1-201ENST00000508358 LAMC3Q9Y6N6 1575 aa13.03□□□□□ -0.32
AC004063.1-201ENST00000508358 BAZ1AQ9NRL2 1556 aaPredicted RBP13.01□□□□□ -0.33
AC004063.1-201ENST00000508358 KIF21AQ7Z4S6 1674 aa13□□□□□ -0.33
AC004063.1-201ENST00000508358 PDS5BQ9NTI5 1447 aa13□□□□□ -0.33
AC004063.1-201ENST00000508358 TSPYL2Q9H2G4 693 aaPredicted RBP12.97□□□□□ -0.33
AC004063.1-201ENST00000508358 RGL2O15211 777 aa12.96□□□□□ -0.33
AC004063.1-201ENST00000508358 PEG3Q9GZU2 1588 aa12.91□□□□□ -0.34
AC004063.1-201ENST00000508358 MS4A3Q96HJ5 214 aa12.9□□□□□ -0.34
AC004063.1-201ENST00000508358 PYGBP11216 843 aa12.89□□□□□ -0.35
AC004063.1-201ENST00000508358 CHRM1P11229 460 aaPredicted RBP12.88□□□□□ -0.35
AC004063.1-201ENST00000508358 ASTLQ6HA08 431 aaPredicted RBP12.88□□□□□ -0.35
AC004063.1-201ENST00000508358 CADPSQ9ULU8 1353 aa12.88□□□□□ -0.35
AC004063.1-201ENST00000508358 MRC2Q9UBG0 1479 aa12.88□□□□□ -0.35
AC004063.1-201ENST00000508358 MROH2BQ7Z745 1585 aa12.88□□□□□ -0.35
AC004063.1-201ENST00000508358 CCDC61Q9Y6R9 512 aa12.87□□□□□ -0.35
AC004063.1-201ENST00000508358 C7P10643 843 aa12.85□□□□□ -0.35
AC004063.1-201ENST00000508358 PELP1Q8IZL8 1130 aaKnown RBP12.85□□□□□ -0.35
AC004063.1-201ENST00000508358 SLC39A7Q92504 469 aa12.85□□□□□ -0.35
AC004063.1-201ENST00000508358 ATMINO43313 823 aaPredicted RBP12.84□□□□□ -0.35
AC004063.1-201ENST00000508358 RNF25Q96BH1 459 aaPredicted RBP12.84□□□□□ -0.35
AC004063.1-201ENST00000508358 OTUD5Q96G74 571 aa12.83□□□□□ -0.36
AC004063.1-201ENST00000508358 RIOK3O14730 519 aaKnown RBP12.82□□□□□ -0.36
AC004063.1-201ENST00000508358 POTEB2H3BUK9 544 aa12.81□□□□□ -0.36
AC004063.1-201ENST00000508358 KIF12Q96FN5 646 aa12.81□□□□□ -0.36
AC004063.1-201ENST00000508358 METRNQ9UJH8 293 aa12.81□□□□□ -0.36
AC004063.1-201ENST00000508358 WDR62O43379 1518 aa12.81□□□□□ -0.36
AC004063.1-201ENST00000508358 CEP164Q9UPV0 1460 aa12.79□□□□□ -0.36
AC004063.1-201ENST00000508358 TAOK2Q9UL54 1235 aa12.77□□□□□ -0.37
AC004063.1-201ENST00000508358 CHGAP10645 457 aaKnown RBP12.76□□□□□ -0.37
AC004063.1-201ENST00000508358 FANCD2Q9BXW9 1451 aa12.74□□□□□ -0.37
AC004063.1-201ENST00000508358 MAMSTRQ6ZN01 415 aa12.74□□□□□ -0.37
AC004063.1-201ENST00000508358 WIZO95785 1651 aa12.73□□□□□ -0.37
AC004063.1-201ENST00000508358 VGFO15240 615 aaPredicted RBP12.73□□□□□ -0.37
AC004063.1-201ENST00000508358 MAP3K13O43283 966 aa12.72□□□□□ -0.37
AC004063.1-201ENST00000508358 ZNF467Q7Z7K2 595 aaPredicted RBP12.72□□□□□ -0.37
AC004063.1-201ENST00000508358 ATN1P54259 1190 aaPredicted RBP12.71□□□□□ -0.37
AC004063.1-201ENST00000508358 TIE1P35590 1138 aa12.7□□□□□ -0.38
AC004063.1-201ENST00000508358 BBXQ8WY36 941 aaPredicted RBP12.69□□□□□ -0.38
AC004063.1-201ENST00000508358 PCDHB8Q9UN66 801 aa12.69□□□□□ -0.38
AC004063.1-201ENST00000508358 PCDHB13Q9Y5F0 798 aa12.69□□□□□ -0.38
AC004063.1-201ENST00000508358 HS6ST3Q8IZP7 471 aa12.68□□□□□ -0.38
AC004063.1-201ENST00000508358 SGIP1Q9BQI5 828 aa12.68□□□□□ -0.38
AC004063.1-201ENST00000508358 BMP2KQ9NSY1 1161 aaPredicted RBP12.67□□□□□ -0.38
AC004063.1-201ENST00000508358 STK25O00506 426 aa12.66□□□□□ -0.38
AC004063.1-201ENST00000508358 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.66□□□□□ -0.38
AC004063.1-201ENST00000508358 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.65□□□□□ -0.38
AC004063.1-201ENST00000508358 ZFP91Q96JP5 570 aaPredicted RBP12.65□□□□□ -0.38
AC004063.1-201ENST00000508358 RIMBP3CA6NJZ7 1639 aa12.63□□□□□ -0.39
AC004063.1-201ENST00000508358 RIMBP3BA6NNM3 1639 aa12.63□□□□□ -0.39
AC004063.1-201ENST00000508358 RIMBP3Q9UFD9 1639 aa12.63□□□□□ -0.39
AC004063.1-201ENST00000508358 IFNL1Q8IU54 200 aa12.63□□□□□ -0.39
AC004063.1-201ENST00000508358 SCUBE2Q9NQ36 999 aa12.63□□□□□ -0.39
AC004063.1-201ENST00000508358 CFTRP13569 1480 aa12.63□□□□□ -0.39
AC004063.1-201ENST00000508358 SLC24A1O60721 1099 aa12.62□□□□□ -0.39
AC004063.1-201ENST00000508358 PLCB2Q00722 1185 aa12.62□□□□□ -0.39
AC004063.1-201ENST00000508358 PDAP1Q13442 181 aaKnown RBP12.62□□□□□ -0.39
AC004063.1-201ENST00000508358 URB2Q14146 1524 aaKnown RBP12.62□□□□□ -0.39
AC004063.1-201ENST00000508358 BCL11BQ9C0K0 894 aaPredicted RBP12.61□□□□□ -0.39
AC004063.1-201ENST00000508358 TRPC6Q9Y210 931 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms