RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 TAF7LQ5H9L4 462 aa15.3■□□□□ 0.04
PDLIM5-210ENST00000508216 ABCB7O75027 752 aa15.29■□□□□ 0.04
PDLIM5-210ENST00000508216 YTHDC1Q96MU7 727 aaKnown RBP15.29■□□□□ 0.04
PDLIM5-210ENST00000508216 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.27■□□□□ 0.04
PDLIM5-210ENST00000508216 RSPH6AQ9H0K4 717 aa15.26■□□□□ 0.03
PDLIM5-210ENST00000508216 CCER1Q8TC90 406 aaPredicted RBP15.24■□□□□ 0.03
PDLIM5-210ENST00000508216 MIER1Q8N108 512 aa15.21■□□□□ 0.03
PDLIM5-210ENST00000508216 IL27Q8NEV9 243 aa15.16■□□□□ 0.02
PDLIM5-210ENST00000508216 RBM10P98175 930 aaKnown RBP15.14■□□□□ 0.01
PDLIM5-210ENST00000508216 ZBTB12Q9Y330 459 aaPredicted RBP15.13■□□□□ 0.01
PDLIM5-210ENST00000508216 BCL11BQ9C0K0 894 aaPredicted RBP15.12■□□□□ 0.01
PDLIM5-210ENST00000508216 ZNF326Q5BKZ1 582 aaKnown RBP15.09■□□□□ 0.01
PDLIM5-210ENST00000508216 HOMEZQ8IX15 550 aa15.09■□□□□ 0.01
PDLIM5-210ENST00000508216 FBLN2P98095 1184 aa15.08■□□□□ 0.01
PDLIM5-210ENST00000508216 VSIG10Q8N0Z9 540 aa15.07■□□□□ 0
PDLIM5-210ENST00000508216 TIMELESSQ9UNS1 1208 aa15.06■□□□□ 0
PDLIM5-210ENST00000508216 MKRN4PQ13434 485 aaPredicted RBP15.06■□□□□ 0
PDLIM5-210ENST00000508216 RSPH4AQ5TD94 716 aa15.06■□□□□ 0
PDLIM5-210ENST00000508216 WASHC2CQ9Y4E1 1318 aa15.05■□□□□ -0
PDLIM5-210ENST00000508216 WASHC2AQ641Q2 1341 aa15.01□□□□□ -0.01
PDLIM5-210ENST00000508216 LOC105371045A0A1W2PR82 267 aa14.98□□□□□ -0.01
PDLIM5-210ENST00000508216 A0A0U1RQG5 324 aaPredicted RBP14.97□□□□□ -0.01
PDLIM5-210ENST00000508216 BRD2P25440 801 aaKnown RBP14.96□□□□□ -0.01
PDLIM5-210ENST00000508216 RRP9O43818 475 aaKnown RBP14.96□□□□□ -0.02
PDLIM5-210ENST00000508216 ABCC9O60706 1549 aa14.95□□□□□ -0.02
PDLIM5-210ENST00000508216 RTL5Q5HYW3 569 aaPredicted RBP14.95□□□□□ -0.02
PDLIM5-210ENST00000508216 USP35Q9P2H5 1018 aa14.95□□□□□ -0.02
PDLIM5-210ENST00000508216 SUPT5HO00267 1087 aaKnown RBP14.94□□□□□ -0.02
PDLIM5-210ENST00000508216 NOP58Q9Y2X3 529 aaKnown RBP14.94□□□□□ -0.02
PDLIM5-210ENST00000508216 RTN4Q9NQC3 1192 aaKnown RBP14.9□□□□□ -0.02
PDLIM5-210ENST00000508216 FAM43AQ8N2R8 423 aa14.88□□□□□ -0.03
PDLIM5-210ENST00000508216 CDK11AQ9UQ88 783 aaPredicted RBP14.85□□□□□ -0.03
PDLIM5-210ENST00000508216 FKBP8Q14318 412 aa14.84□□□□□ -0.03
PDLIM5-210ENST00000508216 CENPJQ9HC77 1338 aaPredicted RBP14.84□□□□□ -0.03
PDLIM5-210ENST00000508216 OSCARQ8IYS5 282 aa14.79□□□□□ -0.04
PDLIM5-210ENST00000508216 CALD1Q05682 793 aaKnown RBP14.78□□□□□ -0.04
PDLIM5-210ENST00000508216 SPDYE4A6NLX3 237 aa14.75□□□□□ -0.05
PDLIM5-210ENST00000508216 HSP90AA2PQ14568 343 aaPredicted RBP14.75□□□□□ -0.05
PDLIM5-210ENST00000508216 IPO4Q8TEX9 1081 aaKnown RBP14.75□□□□□ -0.05
PDLIM5-210ENST00000508216 NAP1L5Q96NT1 182 aaPredicted RBP14.75□□□□□ -0.05
PDLIM5-210ENST00000508216 NBR1Q14596 966 aa14.73□□□□□ -0.05
PDLIM5-210ENST00000508216 NAP1L2Q9ULW6 460 aaPredicted RBP14.73□□□□□ -0.05
PDLIM5-210ENST00000508216 PRDM4Q9UKN5 801 aa14.72□□□□□ -0.05
PDLIM5-210ENST00000508216 SPDYE2BA6NHP3 402 aa14.71□□□□□ -0.05
PDLIM5-210ENST00000508216 SPDYE6P0CI01 402 aa14.71□□□□□ -0.05
PDLIM5-210ENST00000508216 SPDYE2Q495Y8 402 aa14.71□□□□□ -0.05
PDLIM5-210ENST00000508216 CHMP4AQ9BY43 222 aa14.71□□□□□ -0.05
PDLIM5-210ENST00000508216 TULP1O00294 542 aaPredicted RBP14.7□□□□□ -0.06
PDLIM5-210ENST00000508216 BCANQ96GW7 911 aa14.7□□□□□ -0.06
PDLIM5-210ENST00000508216 BCCIPQ9P287 314 aaKnown RBP eCLIP14.69□□□□□ -0.06
PDLIM5-210ENST00000508216 NPM2Q86SE8 214 aaKnown RBP14.68□□□□□ -0.06
PDLIM5-210ENST00000508216 CHRM1P11229 460 aaPredicted RBP14.66□□□□□ -0.06
PDLIM5-210ENST00000508216 ZNF692Q9BU19 519 aaPredicted RBP14.65□□□□□ -0.06
PDLIM5-210ENST00000508216 RBM42Q9BTD8 480 aaKnown RBP14.64□□□□□ -0.07
PDLIM5-210ENST00000508216 FBXO3Q9UK99 471 aa14.64□□□□□ -0.07
PDLIM5-210ENST00000508216 PAK3O75914 559 aaPredicted RBP14.63□□□□□ -0.07
PDLIM5-210ENST00000508216 PAXIP1Q6ZW49 1069 aaPredicted RBP14.63□□□□□ -0.07
PDLIM5-210ENST00000508216 IPO9Q96P70 1041 aaKnown RBP14.63□□□□□ -0.07
PDLIM5-210ENST00000508216 GTF2E1P29083 439 aaPredicted RBP14.6□□□□□ -0.07
PDLIM5-210ENST00000508216 BRPF3Q9ULD4 1205 aa14.6□□□□□ -0.07
PDLIM5-210ENST00000508216 SSUH2Q9Y2M2 353 aa14.6□□□□□ -0.07
PDLIM5-210ENST00000508216 NEFMP07197 916 aa14.6□□□□□ -0.07
PDLIM5-210ENST00000508216 NCLP19338 710 aaKnown RBP14.6□□□□□ -0.07
PDLIM5-210ENST00000508216 TEX2Q8IWB9 1127 aa14.6□□□□□ -0.07
PDLIM5-210ENST00000508216 HSP90AA1P07900 732 aaKnown RBP14.59□□□□□ -0.07
PDLIM5-210ENST00000508216 BBXQ8WY36 941 aaPredicted RBP14.58□□□□□ -0.08
PDLIM5-210ENST00000508216 PPM1GO15355 546 aaPredicted RBP14.57□□□□□ -0.08
PDLIM5-210ENST00000508216 VGFO15240 615 aaPredicted RBP14.57□□□□□ -0.08
PDLIM5-210ENST00000508216 PROM2Q8N271 834 aa14.57□□□□□ -0.08
PDLIM5-210ENST00000508216 AMER1Q5JTC6 1135 aaPredicted RBP14.55□□□□□ -0.08
PDLIM5-210ENST00000508216 HSP90B1P14625 803 aaKnown RBP14.55□□□□□ -0.08
PDLIM5-210ENST00000508216 CANXP27824 592 aaKnown RBP14.55□□□□□ -0.08
PDLIM5-210ENST00000508216 GSE1Q14687 1217 aa14.55□□□□□ -0.08
PDLIM5-210ENST00000508216 DHX37Q8IY37 1157 aaKnown RBP14.55□□□□□ -0.08
PDLIM5-210ENST00000508216 ARID4BQ4LE39 1312 aaPredicted RBP14.54□□□□□ -0.08
PDLIM5-210ENST00000508216 STAC3Q96MF2 364 aa14.54□□□□□ -0.08
PDLIM5-210ENST00000508216 WRNQ14191 1432 aaPredicted RBP eCLIP14.53□□□□□ -0.08
PDLIM5-210ENST00000508216 ITGAEP38570 1179 aa14.52□□□□□ -0.08
PDLIM5-210ENST00000508216 PDCL3Q9H2J4 239 aa14.52□□□□□ -0.08
PDLIM5-210ENST00000508216 ZBTB47Q9UFB7 747 aaPredicted RBP14.52□□□□□ -0.08
PDLIM5-210ENST00000508216 ANP32AP39687 249 aaKnown RBP14.52□□□□□ -0.09
PDLIM5-210ENST00000508216 CNGB1Q14028 1251 aaPredicted RBP14.52□□□□□ -0.09
PDLIM5-210ENST00000508216 FTSJ3Q8IY81 847 aaKnown RBP14.51□□□□□ -0.09
PDLIM5-210ENST00000508216 DCAF8L2P0C7V8 631 aa14.48□□□□□ -0.09
PDLIM5-210ENST00000508216 AKT1S1Q96B36 256 aa14.48□□□□□ -0.09
PDLIM5-210ENST00000508216 CHMP4BQ9H444 224 aaKnown RBP14.47□□□□□ -0.09
PDLIM5-210ENST00000508216 EEA1Q15075 1411 aa14.46□□□□□ -0.09
PDLIM5-210ENST00000508216 PABPN1Q86U42 306 aaKnown RBP eCLIP14.45□□□□□ -0.1
PDLIM5-210ENST00000508216 PPP4R2Q9NY27 417 aa14.45□□□□□ -0.1
PDLIM5-210ENST00000508216 ZFP91Q96JP5 570 aaPredicted RBP14.44□□□□□ -0.1
PDLIM5-210ENST00000508216 SHROOM4Q9ULL8 1493 aa14.42□□□□□ -0.1
PDLIM5-210ENST00000508216 C14orf37Q86TY3 774 aa14.42□□□□□ -0.1
PDLIM5-210ENST00000508216 SMAP1Q8IYB5 467 aaPredicted RBP14.41□□□□□ -0.1
PDLIM5-210ENST00000508216 CLCN1P35523 988 aa14.39□□□□□ -0.11
PDLIM5-210ENST00000508216 UTP14CQ5TAP6 766 aaKnown RBP14.39□□□□□ -0.11
PDLIM5-210ENST00000508216 CCER2I3L3R5 266 aa14.37□□□□□ -0.11
PDLIM5-210ENST00000508216 TPM2P07951 284 aa14.37□□□□□ -0.11
PDLIM5-210ENST00000508216 RGS3P49796 1198 aa14.37□□□□□ -0.11
PDLIM5-210ENST00000508216 MAP7D2Q96T17 732 aa14.36□□□□□ -0.11
PDLIM5-210ENST00000508216 CDK11BP21127 795 aaKnown RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms