RNA–Protein interactions for RNA: ENST00000507428.1

LINC02039-201, Transcript of long intergenic non-protein coding RNA 2039, humanhuman

TSL 4 BASIC

Gene LINC02039, Length 566 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02039-201ENST00000507428 ATMINO43313 823 aaPredicted RBP14.74□□□□□ -0.05
LINC02039-201ENST00000507428 PLSCR2Q9NRY7 297 aa14.72□□□□□ -0.05
LINC02039-201ENST00000507428 MIER1Q8N108 512 aa14.69□□□□□ -0.06
LINC02039-201ENST00000507428 C7P10643 843 aa14.68□□□□□ -0.06
LINC02039-201ENST00000507428 SLC39A7Q92504 469 aa14.68□□□□□ -0.06
LINC02039-201ENST00000507428 KIF12Q96FN5 646 aa14.68□□□□□ -0.06
LINC02039-201ENST00000507428 METRNQ9UJH8 293 aa14.67□□□□□ -0.06
LINC02039-201ENST00000507428 PLEKHG5O94827 1062 aa14.65□□□□□ -0.06
LINC02039-201ENST00000507428 ATN1P54259 1190 aaPredicted RBP14.61□□□□□ -0.07
LINC02039-201ENST00000507428 RASEFQ8IZ41 740 aa14.61□□□□□ -0.07
LINC02039-201ENST00000507428 POTEJP0CG39 1038 aa14.6□□□□□ -0.07
LINC02039-201ENST00000507428 MAP3K13O43283 966 aa14.57□□□□□ -0.08
LINC02039-201ENST00000507428 BMP2KQ9NSY1 1161 aaPredicted RBP14.54□□□□□ -0.08
LINC02039-201ENST00000507428 TRPC6Q9Y210 931 aa14.54□□□□□ -0.08
LINC02039-201ENST00000507428 TIE1P35590 1138 aa14.51□□□□□ -0.09
LINC02039-201ENST00000507428 MAMSTRQ6ZN01 415 aa14.51□□□□□ -0.09
LINC02039-201ENST00000507428 PLCD3Q8N3E9 789 aa14.51□□□□□ -0.09
LINC02039-201ENST00000507428 POTEFA5A3E0 1075 aa14.49□□□□□ -0.09
LINC02039-201ENST00000507428 POTEMA6NI47 508 aa14.46□□□□□ -0.09
LINC02039-201ENST00000507428 NUBP1P53384 320 aa14.45□□□□□ -0.1
LINC02039-201ENST00000507428 SGIP1Q9BQI5 828 aa14.45□□□□□ -0.1
LINC02039-201ENST00000507428 ZBTB47Q9UFB7 747 aaPredicted RBP14.44□□□□□ -0.1
LINC02039-201ENST00000507428 TTLL13PA6NNM8 815 aa14.42□□□□□ -0.1
LINC02039-201ENST00000507428 POTEGQ6S5H5 508 aa14.42□□□□□ -0.1
LINC02039-201ENST00000507428 SCUBE2Q9NQ36 999 aa14.39□□□□□ -0.11
LINC02039-201ENST00000507428 FKBP8Q14318 412 aa14.38□□□□□ -0.11
LINC02039-201ENST00000507428 PCDHB13Q9Y5F0 798 aa14.37□□□□□ -0.11
LINC02039-201ENST00000507428 COLQQ9Y215 455 aaPredicted RBP14.35□□□□□ -0.11
LINC02039-201ENST00000507428 LCE2DQ5TA82 110 aaPredicted RBP14.32□□□□□ -0.12
LINC02039-201ENST00000507428 IFNL1Q8IU54 200 aa14.31□□□□□ -0.12
LINC02039-201ENST00000507428 TRIM35Q9UPQ4 493 aa14.31□□□□□ -0.12
LINC02039-201ENST00000507428 SEC24BO95487 1268 aa14.3□□□□□ -0.12
LINC02039-201ENST00000507428 IER5LQ5T953 404 aa14.3□□□□□ -0.12
LINC02039-201ENST00000507428 FAM212AQ96EL1 285 aa14.29□□□□□ -0.12
LINC02039-201ENST00000507428 PCDH10Q9P2E7 1040 aa14.29□□□□□ -0.12
LINC02039-201ENST00000507428 FAM163AQ96GL9 167 aaPredicted RBP14.28□□□□□ -0.12
LINC02039-201ENST00000507428 TMEM106CQ9BVX2 250 aa14.2□□□□□ -0.14
LINC02039-201ENST00000507428 DCAF8Q5TAQ9 597 aa14.18□□□□□ -0.14
LINC02039-201ENST00000507428 FBXO3Q9UK99 471 aa14.17□□□□□ -0.14
LINC02039-201ENST00000507428 PYGBP11216 843 aa14.12□□□□□ -0.15
LINC02039-201ENST00000507428 IRX5P78411 483 aaPredicted RBP14.12□□□□□ -0.15
LINC02039-201ENST00000507428 PLCG2P16885 1265 aa14.09□□□□□ -0.15
LINC02039-201ENST00000507428 SLAIN1Q8ND83 568 aa14.06□□□□□ -0.16
LINC02039-201ENST00000507428 PCDHB8Q9UN66 801 aa14.05□□□□□ -0.16
LINC02039-201ENST00000507428 OCEL1Q9H607 264 aa14.04□□□□□ -0.16
LINC02039-201ENST00000507428 VASPP50552 380 aaPredicted RBP13.99□□□□□ -0.17
LINC02039-201ENST00000507428 GSE1Q14687 1217 aa13.98□□□□□ -0.17
LINC02039-201ENST00000507428 ST18O60284 1047 aa13.97□□□□□ -0.17
LINC02039-201ENST00000507428 KLHL34Q8N239 644 aa13.97□□□□□ -0.17
LINC02039-201ENST00000507428 CHRM1P11229 460 aaPredicted RBP13.95□□□□□ -0.18
LINC02039-201ENST00000507428 CDAN1Q8IWY9 1227 aa13.94□□□□□ -0.18
LINC02039-201ENST00000507428 ZNF467Q7Z7K2 595 aaPredicted RBP13.93□□□□□ -0.18
LINC02039-201ENST00000507428 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.88□□□□□ -0.19
LINC02039-201ENST00000507428 PDCD7Q8N8D1 485 aaKnown RBP13.87□□□□□ -0.19
LINC02039-201ENST00000507428 SNPHO15079 494 aa13.83□□□□□ -0.2
LINC02039-201ENST00000507428 MKRN3Q13064 507 aaKnown RBP13.82□□□□□ -0.2
LINC02039-201ENST00000507428 PSEN1P49768 467 aa13.81□□□□□ -0.2
LINC02039-201ENST00000507428 TMEM121BQ9BXQ6 578 aaPredicted RBP13.81□□□□□ -0.2
LINC02039-201ENST00000507428 GOLGA2Q08379 1002 aa13.8□□□□□ -0.2
LINC02039-201ENST00000507428 L3MBTL3Q96JM7 780 aaPredicted RBP13.79□□□□□ -0.2
LINC02039-201ENST00000507428 ILDR1Q86SU0 546 aaPredicted RBP13.76□□□□□ -0.21
LINC02039-201ENST00000507428 IFNLR1Q8IU57 520 aaPredicted RBP13.76□□□□□ -0.21
LINC02039-201ENST00000507428 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.76□□□□□ -0.21
LINC02039-201ENST00000507428 SPOCK2Q92563 424 aa13.74□□□□□ -0.21
LINC02039-201ENST00000507428 PDAP1Q13442 181 aaKnown RBP13.73□□□□□ -0.21
LINC02039-201ENST00000507428 C3orf67Q6ZVT6 689 aa13.72□□□□□ -0.21
LINC02039-201ENST00000507428 MARVELD3Q96A59 401 aa13.68□□□□□ -0.22
LINC02039-201ENST00000507428 CIZ1Q9ULV3 898 aaPredicted RBP13.68□□□□□ -0.22
LINC02039-201ENST00000507428 DPY19L2Q6NUT2 758 aa13.65□□□□□ -0.22
LINC02039-201ENST00000507428 CABP2Q9NPB3 220 aa13.63□□□□□ -0.23
LINC02039-201ENST00000507428 SPNS2Q8IVW8 549 aa13.62□□□□□ -0.23
LINC02039-201ENST00000507428 MMRN1Q13201 1228 aa13.59□□□□□ -0.23
LINC02039-201ENST00000507428 BOLA1Q9Y3E2 137 aa13.57□□□□□ -0.24
LINC02039-201ENST00000507428 EMP3P54852 163 aa13.56□□□□□ -0.24
LINC02039-201ENST00000507428 POTEB3A0JP26 581 aa13.54□□□□□ -0.24
LINC02039-201ENST00000507428 POTEBQ6S5H4 581 aa13.54□□□□□ -0.24
LINC02039-201ENST00000507428 TRIM41Q8WV44 630 aa13.51□□□□□ -0.25
LINC02039-201ENST00000507428 G3V3G9 751 aa13.5□□□□□ -0.25
LINC02039-201ENST00000507428 HS3ST6Q96QI5 342 aa13.5□□□□□ -0.25
LINC02039-201ENST00000507428 HOXB3P14651 431 aaPredicted RBP13.49□□□□□ -0.25
LINC02039-201ENST00000507428 FAM205CA6NFA0 338 aa13.48□□□□□ -0.25
LINC02039-201ENST00000507428 KRTAP3-3Q9BYR6 98 aa13.47□□□□□ -0.25
LINC02039-201ENST00000507428 KRTAP3-2Q9BYR7 98 aa13.47□□□□□ -0.25
LINC02039-201ENST00000507428 EFCAB3Q8N7B9 438 aa13.46□□□□□ -0.25
LINC02039-201ENST00000507428 HOXB1P14653 301 aaPredicted RBP13.41□□□□□ -0.26
LINC02039-201ENST00000507428 DOK7Q18PE1 504 aa13.37□□□□□ -0.27
LINC02039-201ENST00000507428 SOX12O15370 315 aa13.36□□□□□ -0.27
LINC02039-201ENST00000507428 ZNF710Q8N1W2 664 aa13.36□□□□□ -0.27
LINC02039-201ENST00000507428 RIOK3O14730 519 aaKnown RBP13.34□□□□□ -0.27
LINC02039-201ENST00000507428 RNF25Q96BH1 459 aaPredicted RBP13.34□□□□□ -0.27
LINC02039-201ENST00000507428 MICALL2Q8IY33 904 aa13.33□□□□□ -0.28
LINC02039-201ENST00000507428 TMEM92Q6UXU6 159 aa13.32□□□□□ -0.28
LINC02039-201ENST00000507428 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.3□□□□□ -0.28
LINC02039-201ENST00000507428 ZFP91Q96JP5 570 aaPredicted RBP13.3□□□□□ -0.28
LINC02039-201ENST00000507428 MS4A4AQ96JQ5 239 aa13.3□□□□□ -0.28
LINC02039-201ENST00000507428 ERBB3P21860 1342 aa13.29□□□□□ -0.28
LINC02039-201ENST00000507428 VGFO15240 615 aaPredicted RBP13.28□□□□□ -0.28
LINC02039-201ENST00000507428 RIMBP2O15034 1052 aa13.27□□□□□ -0.29
LINC02039-201ENST00000507428 ZSWIM6Q9HCJ5 1215 aa13.25□□□□□ -0.29
LINC02039-201ENST00000507428 PHF8Q9UPP1 1060 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms