RNA–Protein interactions for RNA: ENST00000506089.1

SMARCAD1-205, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 4

Gene SMARCAD1, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-205ENST00000506089 POTEJP0CG39 1038 aa11.86□□□□□ -0.51
SMARCAD1-205ENST00000506089 ASTLQ6HA08 431 aaPredicted RBP11.84□□□□□ -0.51
SMARCAD1-205ENST00000506089 ATMINO43313 823 aaPredicted RBP11.82□□□□□ -0.52
SMARCAD1-205ENST00000506089 C7P10643 843 aa11.79□□□□□ -0.52
SMARCAD1-205ENST00000506089 SLC39A7Q92504 469 aa11.79□□□□□ -0.52
SMARCAD1-205ENST00000506089 LCE2DQ5TA82 110 aaPredicted RBP11.76□□□□□ -0.53
SMARCAD1-205ENST00000506089 PCDH10Q9P2E7 1040 aa11.73□□□□□ -0.53
SMARCAD1-205ENST00000506089 MAMSTRQ6ZN01 415 aa11.72□□□□□ -0.53
SMARCAD1-205ENST00000506089 ATN1P54259 1190 aaPredicted RBP11.71□□□□□ -0.53
SMARCAD1-205ENST00000506089 TSPYL2Q9H2G4 693 aaPredicted RBP11.71□□□□□ -0.53
SMARCAD1-205ENST00000506089 FAM163AQ96GL9 167 aaPredicted RBP11.69□□□□□ -0.54
SMARCAD1-205ENST00000506089 SCUBE2Q9NQ36 999 aa11.66□□□□□ -0.54
SMARCAD1-205ENST00000506089 CCDC61Q9Y6R9 512 aa11.66□□□□□ -0.54
SMARCAD1-205ENST00000506089 POTEFA5A3E0 1075 aa11.64□□□□□ -0.55
SMARCAD1-205ENST00000506089 KIF12Q96FN5 646 aa11.62□□□□□ -0.55
SMARCAD1-205ENST00000506089 BMP2KQ9NSY1 1161 aaPredicted RBP11.62□□□□□ -0.55
SMARCAD1-205ENST00000506089 TRPC6Q9Y210 931 aa11.62□□□□□ -0.55
SMARCAD1-205ENST00000506089 MAP3K13O43283 966 aa11.54□□□□□ -0.56
SMARCAD1-205ENST00000506089 PROM2Q8N271 834 aa11.52□□□□□ -0.57
SMARCAD1-205ENST00000506089 COLQQ9Y215 455 aaPredicted RBP11.52□□□□□ -0.57
SMARCAD1-205ENST00000506089 TIE1P35590 1138 aa11.5□□□□□ -0.57
SMARCAD1-205ENST00000506089 TTLL13PA6NNM8 815 aa11.48□□□□□ -0.57
SMARCAD1-205ENST00000506089 RASEFQ8IZ41 740 aa11.47□□□□□ -0.57
SMARCAD1-205ENST00000506089 SEC24BO95487 1268 aa11.46□□□□□ -0.57
SMARCAD1-205ENST00000506089 CDAN1Q8IWY9 1227 aa11.45□□□□□ -0.58
SMARCAD1-205ENST00000506089 TRIM35Q9UPQ4 493 aa11.4□□□□□ -0.58
SMARCAD1-205ENST00000506089 MIER1Q8N108 512 aa11.39□□□□□ -0.59
SMARCAD1-205ENST00000506089 PLEKHG5O94827 1062 aa11.37□□□□□ -0.59
SMARCAD1-205ENST00000506089 IER5LQ5T953 404 aa11.36□□□□□ -0.59
SMARCAD1-205ENST00000506089 ST18O60284 1047 aa11.35□□□□□ -0.59
SMARCAD1-205ENST00000506089 SLAIN1Q8ND83 568 aa11.35□□□□□ -0.59
SMARCAD1-205ENST00000506089 PCDHB13Q9Y5F0 798 aa11.35□□□□□ -0.59
SMARCAD1-205ENST00000506089 IFNL1Q8IU54 200 aa11.29□□□□□ -0.6
SMARCAD1-205ENST00000506089 SGIP1Q9BQI5 828 aa11.29□□□□□ -0.6
SMARCAD1-205ENST00000506089 FKBP8Q14318 412 aa11.28□□□□□ -0.6
SMARCAD1-205ENST00000506089 TMEM106CQ9BVX2 250 aa11.26□□□□□ -0.61
SMARCAD1-205ENST00000506089 PLCD3Q8N3E9 789 aa11.25□□□□□ -0.61
SMARCAD1-205ENST00000506089 PLCG2P16885 1265 aa11.24□□□□□ -0.61
SMARCAD1-205ENST00000506089 NUBP1P53384 320 aa11.23□□□□□ -0.61
SMARCAD1-205ENST00000506089 IRX5P78411 483 aaPredicted RBP11.2□□□□□ -0.62
SMARCAD1-205ENST00000506089 MMRN1Q13201 1228 aa11.2□□□□□ -0.62
SMARCAD1-205ENST00000506089 SPNS2Q8IVW8 549 aa11.19□□□□□ -0.62
SMARCAD1-205ENST00000506089 MARVELD3Q96A59 401 aa11.15□□□□□ -0.62
SMARCAD1-205ENST00000506089 FAM212AQ96EL1 285 aa11.15□□□□□ -0.62
SMARCAD1-205ENST00000506089 TMEM121BQ9BXQ6 578 aaPredicted RBP11.14□□□□□ -0.63
SMARCAD1-205ENST00000506089 ZBTB47Q9UFB7 747 aaPredicted RBP11.13□□□□□ -0.63
SMARCAD1-205ENST00000506089 OCEL1Q9H607 264 aa11.12□□□□□ -0.63
SMARCAD1-205ENST00000506089 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.08□□□□□ -0.64
SMARCAD1-205ENST00000506089 SNPHO15079 494 aa11.07□□□□□ -0.64
SMARCAD1-205ENST00000506089 PYGBP11216 843 aa11.05□□□□□ -0.64
SMARCAD1-205ENST00000506089 PCDHB8Q9UN66 801 aa11.04□□□□□ -0.64
SMARCAD1-205ENST00000506089 DCAF8Q5TAQ9 597 aa11□□□□□ -0.65
SMARCAD1-205ENST00000506089 EMP3P54852 163 aa10.99□□□□□ -0.65
SMARCAD1-205ENST00000506089 PDCD7Q8N8D1 485 aaKnown RBP10.98□□□□□ -0.65
SMARCAD1-205ENST00000506089 POTEB3A0JP26 581 aa10.97□□□□□ -0.65
SMARCAD1-205ENST00000506089 POTEBQ6S5H4 581 aa10.97□□□□□ -0.65
SMARCAD1-205ENST00000506089 C3orf67Q6ZVT6 689 aa10.96□□□□□ -0.65
SMARCAD1-205ENST00000506089 KRTAP3-3Q9BYR6 98 aa10.96□□□□□ -0.65
SMARCAD1-205ENST00000506089 KRTAP3-2Q9BYR7 98 aa10.96□□□□□ -0.65
SMARCAD1-205ENST00000506089 HS3ST6Q96QI5 342 aa10.93□□□□□ -0.66
SMARCAD1-205ENST00000506089 FAM205CA6NFA0 338 aa10.91□□□□□ -0.66
SMARCAD1-205ENST00000506089 L3MBTL3Q96JM7 780 aaPredicted RBP10.88□□□□□ -0.67
SMARCAD1-205ENST00000506089 MKRN3Q13064 507 aaKnown RBP10.87□□□□□ -0.67
SMARCAD1-205ENST00000506089 GOLGA2Q08379 1002 aa10.86□□□□□ -0.67
SMARCAD1-205ENST00000506089 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.85□□□□□ -0.678e-7■■□□□ 13.6
SMARCAD1-205ENST00000506089 ZNF467Q7Z7K2 595 aaPredicted RBP10.83□□□□□ -0.68
SMARCAD1-205ENST00000506089 FBXO3Q9UK99 471 aa10.83□□□□□ -0.68
SMARCAD1-205ENST00000506089 DPY19L2Q6NUT2 758 aa10.79□□□□□ -0.68
SMARCAD1-205ENST00000506089 PSEN1P49768 467 aa10.77□□□□□ -0.69
SMARCAD1-205ENST00000506089 VASPP50552 380 aaPredicted RBP10.77□□□□□ -0.69
SMARCAD1-205ENST00000506089 HOXB3P14651 431 aaPredicted RBP10.76□□□□□ -0.69
SMARCAD1-205ENST00000506089 GSE1Q14687 1217 aa10.75□□□□□ -0.69
SMARCAD1-205ENST00000506089 ILDR1Q86SU0 546 aaPredicted RBP10.75□□□□□ -0.69
SMARCAD1-205ENST00000506089 CHRM1P11229 460 aaPredicted RBP10.71□□□□□ -0.69
SMARCAD1-205ENST00000506089 KLHL34Q8N239 644 aa10.71□□□□□ -0.69
SMARCAD1-205ENST00000506089 BOLA1Q9Y3E2 137 aa10.69□□□□□ -0.7
SMARCAD1-205ENST00000506089 HOXB1P14653 301 aaPredicted RBP10.68□□□□□ -0.7
SMARCAD1-205ENST00000506089 ERBB3P21860 1342 aa10.67□□□□□ -0.7
SMARCAD1-205ENST00000506089 PDAP1Q13442 181 aaKnown RBP10.67□□□□□ -0.7
SMARCAD1-205ENST00000506089 ZNF710Q8N1W2 664 aa10.67□□□□□ -0.7
SMARCAD1-205ENST00000506089 RNF166Q96A37 237 aaPredicted RBP10.67□□□□□ -0.7
SMARCAD1-205ENST00000506089 CABP2Q9NPB3 220 aa10.67□□□□□ -0.7
SMARCAD1-205ENST00000506089 G3V3G9 751 aa10.66□□□□□ -0.7
SMARCAD1-205ENST00000506089 IFNLR1Q8IU57 520 aaPredicted RBP10.65□□□□□ -0.7
SMARCAD1-205ENST00000506089 DOK7Q18PE1 504 aa10.62□□□□□ -0.71
SMARCAD1-205ENST00000506089 VARS2Q5ST30 1063 aaKnown RBP10.61□□□□□ -0.71
SMARCAD1-205ENST00000506089 MYT1LQ9UL68 1186 aa10.59□□□□□ -0.71
SMARCAD1-205ENST00000506089 RIMBP2O15034 1052 aa10.54□□□□□ -0.72
SMARCAD1-205ENST00000506089 TMEM92Q6UXU6 159 aa10.51□□□□□ -0.73
SMARCAD1-205ENST00000506089 CIZ1Q9ULV3 898 aaPredicted RBP10.51□□□□□ -0.73
SMARCAD1-205ENST00000506089 ZNF687Q8N1G0 1237 aa10.5□□□□□ -0.73
SMARCAD1-205ENST00000506089 EFCAB3Q8N7B9 438 aa10.49□□□□□ -0.73
SMARCAD1-205ENST00000506089 SPOCK2Q92563 424 aa10.48□□□□□ -0.73
SMARCAD1-205ENST00000506089 GPR153Q6NV75 609 aa10.46□□□□□ -0.73
SMARCAD1-205ENST00000506089 MICALL2Q8IY33 904 aa10.46□□□□□ -0.73
SMARCAD1-205ENST00000506089 ZSWIM6Q9HCJ5 1215 aa10.46□□□□□ -0.73
SMARCAD1-205ENST00000506089 PTGER2P43116 358 aa10.41□□□□□ -0.74
SMARCAD1-205ENST00000506089 ANKRD13DQ6ZTN6 518 aa10.41□□□□□ -0.74
SMARCAD1-205ENST00000506089 ARSIQ5FYB1 569 aa10.4□□□□□ -0.74
SMARCAD1-205ENST00000506089 KHSRPQ92945 711 aaKnown RBP eCLIP10.37□□□□□ -0.755e-9■■■■□ 24
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms