RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 ABCC9O60706 1549 aa7.9□□□□□ -1.15
LINC02397-201ENST00000504409 MSNP26038 577 aaKnown RBP7.89□□□□□ -1.15
LINC02397-201ENST00000504409 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.89□□□□□ -1.15
LINC02397-201ENST00000504409 HSP90AA2PQ14568 343 aaPredicted RBP7.89□□□□□ -1.15
LINC02397-201ENST00000504409 CEP164Q9UPV0 1460 aa7.89□□□□□ -1.15
LINC02397-201ENST00000504409 DEKP35659 375 aaKnown RBP7.89□□□□□ -1.15
LINC02397-201ENST00000504409 RRP9O43818 475 aaKnown RBP7.88□□□□□ -1.15
LINC02397-201ENST00000504409 AAMPQ13685 434 aa7.88□□□□□ -1.15
LINC02397-201ENST00000504409 CSPP1Q1MSJ5 1256 aa7.88□□□□□ -1.15
LINC02397-201ENST00000504409 SUPT16HQ9Y5B9 1047 aaKnown RBP7.88□□□□□ -1.15
LINC02397-201ENST00000504409 TCERG1O14776 1098 aaKnown RBP7.87□□□□□ -1.15
LINC02397-201ENST00000504409 TPM2P07951 284 aa7.87□□□□□ -1.15
LINC02397-201ENST00000504409 UBE2Q2Q8WVN8 375 aa7.86□□□□□ -1.15
LINC02397-201ENST00000504409 PKNOX2Q96KN3 472 aa7.86□□□□□ -1.15
LINC02397-201ENST00000504409 DHX8Q14562 1220 aaKnown RBP7.86□□□□□ -1.15
LINC02397-201ENST00000504409 TNIKQ9UKE5 1360 aa7.86□□□□□ -1.15
LINC02397-201ENST00000504409 GOLGA6L1Q8N7Z2 621 aa7.85□□□□□ -1.15
LINC02397-201ENST00000504409 IL27Q8NEV9 243 aa7.85□□□□□ -1.15
LINC02397-201ENST00000504409 SKOR2Q2VWA4 1001 aaPredicted RBP7.85□□□□□ -1.15
LINC02397-201ENST00000504409 NAP1L5Q96NT1 182 aaPredicted RBP7.85□□□□□ -1.15
LINC02397-201ENST00000504409 BAZ1BQ9UIG0 1483 aaKnown RBP7.85□□□□□ -1.15
LINC02397-201ENST00000504409 SYAP1Q96A49 352 aaPredicted RBP7.85□□□□□ -1.15
LINC02397-201ENST00000504409 CCDC66A2RUB6 948 aa7.83□□□□□ -1.16
LINC02397-201ENST00000504409 ROCK2O75116 1388 aaKnown RBP7.83□□□□□ -1.16
LINC02397-201ENST00000504409 PHF14O94880 888 aa7.83□□□□□ -1.16
LINC02397-201ENST00000504409 IPO9Q96P70 1041 aaKnown RBP7.83□□□□□ -1.16
LINC02397-201ENST00000504409 KTN1Q86UP2 1357 aaKnown RBP7.83□□□□□ -1.16
LINC02397-201ENST00000504409 SETQ01105 290 aaPredicted RBP7.82□□□□□ -1.16
LINC02397-201ENST00000504409 RSF1Q96T23 1441 aaPredicted RBP7.82□□□□□ -1.16
LINC02397-201ENST00000504409 NOM1Q5C9Z4 860 aaKnown RBP7.82□□□□□ -1.16
LINC02397-201ENST00000504409 CASC1Q6TDU7 716 aa7.82□□□□□ -1.16
LINC02397-201ENST00000504409 DDX11L8A8MPP1 907 aa7.82□□□□□ -1.16
LINC02397-201ENST00000504409 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.82□□□□□ -1.16
LINC02397-201ENST00000504409 CANXP27824 592 aaKnown RBP7.82□□□□□ -1.16
LINC02397-201ENST00000504409 GBP4Q96PP9 640 aa7.82□□□□□ -1.16
LINC02397-201ENST00000504409 ARID3AQ99856 593 aa7.81□□□□□ -1.16
LINC02397-201ENST00000504409 NGEFQ8N5V2 710 aa7.81□□□□□ -1.16
LINC02397-201ENST00000504409 FAM43AQ8N2R8 423 aa7.81□□□□□ -1.16
LINC02397-201ENST00000504409 RBM19Q9Y4C8 960 aaKnown RBP7.81□□□□□ -1.16
LINC02397-201ENST00000504409 EIF3AQ14152 1382 aaKnown RBP7.81□□□□□ -1.16
LINC02397-201ENST00000504409 ARXQ96QS3 562 aa7.79□□□□□ -1.16
LINC02397-201ENST00000504409 FHAD1B1AJZ9 1412 aa7.79□□□□□ -1.16
LINC02397-201ENST00000504409 KIAA2012Q0VF49 1180 aa7.79□□□□□ -1.16
LINC02397-201ENST00000504409 CAVIN1Q6NZI2 390 aaKnown RBP7.79□□□□□ -1.16
LINC02397-201ENST00000504409 PRKCSHP14314 528 aaPredicted RBP7.79□□□□□ -1.16
LINC02397-201ENST00000504409 HNRNPUQ00839 825 aaKnown RBP eCLIP7.78□□□□□ -1.16
LINC02397-201ENST00000504409 CEP162Q5TB80 1403 aa7.78□□□□□ -1.16
LINC02397-201ENST00000504409 HTATSF1O43719 755 aaKnown RBP7.78□□□□□ -1.16
LINC02397-201ENST00000504409 CLIP1P30622 1438 aa7.78□□□□□ -1.16
LINC02397-201ENST00000504409 NACADO15069 1562 aa7.77□□□□□ -1.17
LINC02397-201ENST00000504409 TPM3P06753 285 aa7.77□□□□□ -1.17
LINC02397-201ENST00000504409 CDCA8Q53HL2 280 aa7.77□□□□□ -1.17
LINC02397-201ENST00000504409 TNNT3P45378 269 aaPredicted RBP7.76□□□□□ -1.17
LINC02397-201ENST00000504409 PDE3BQ13370 1112 aa7.76□□□□□ -1.17
LINC02397-201ENST00000504409 CWC15Q9P013 229 aaKnown RBP7.76□□□□□ -1.17
LINC02397-201ENST00000504409 HMGN5P82970 282 aaKnown RBP7.76□□□□□ -1.17
LINC02397-201ENST00000504409 GSE1Q14687 1217 aa7.76□□□□□ -1.17
LINC02397-201ENST00000504409 MYH16Q9H6N6 1097 aa7.76□□□□□ -1.17
LINC02397-201ENST00000504409 NBR1Q14596 966 aa7.76□□□□□ -1.17
LINC02397-201ENST00000504409 HAP1P54257 671 aaPredicted RBP7.75□□□□□ -1.17
LINC02397-201ENST00000504409 GPS2Q13227 327 aa7.75□□□□□ -1.17
LINC02397-201ENST00000504409 HNRNPUL2Q1KMD3 747 aaKnown RBP7.74□□□□□ -1.17
LINC02397-201ENST00000504409 CHMP4CQ96CF2 233 aa7.74□□□□□ -1.17
LINC02397-201ENST00000504409 PDCL2Q8N4E4 241 aa7.73□□□□□ -1.17
LINC02397-201ENST00000504409 TEX35Q5T0J7 233 aa7.73□□□□□ -1.17
LINC02397-201ENST00000504409 NINLQ9Y2I6 1382 aa7.73□□□□□ -1.17
LINC02397-201ENST00000504409 PTMAP06454 111 aaKnown RBP7.73□□□□□ -1.17
LINC02397-201ENST00000504409 BCANQ96GW7 911 aa7.72□□□□□ -1.17
LINC02397-201ENST00000504409 KIF16BQ96L93 1317 aa7.72□□□□□ -1.17
LINC02397-201ENST00000504409 CSRNP3Q8WYN3 585 aa7.72□□□□□ -1.17
LINC02397-201ENST00000504409 PODXL2Q9NZ53 605 aa7.72□□□□□ -1.17
LINC02397-201ENST00000504409 DNTTIP2Q5QJE6 756 aaKnown RBP7.71□□□□□ -1.17
LINC02397-201ENST00000504409 AXDND1Q5T1B0 1012 aaPredicted RBP7.71□□□□□ -1.17
LINC02397-201ENST00000504409 EIF4G2P78344 907 aaKnown RBP eCLIP7.71□□□□□ -1.18
LINC02397-201ENST00000504409 MAPK8IP3Q9UPT6 1336 aa7.71□□□□□ -1.18
LINC02397-201ENST00000504409 LOC105371045A0A1W2PR82 267 aa7.71□□□□□ -1.18
LINC02397-201ENST00000504409 TSHZ2Q9NRE2 1034 aa7.71□□□□□ -1.18
LINC02397-201ENST00000504409 USP8P40818 1118 aa7.71□□□□□ -1.18
LINC02397-201ENST00000504409 PDIA4P13667 645 aaKnown RBP7.7□□□□□ -1.18
LINC02397-201ENST00000504409 ZRSR1Q15695 479 aaKnown RBP7.7□□□□□ -1.18
LINC02397-201ENST00000504409 CCDC144AA2RUR9 1427 aa7.7□□□□□ -1.18
LINC02397-201ENST00000504409 HSCBQ8IWL3 235 aa7.7□□□□□ -1.18
LINC02397-201ENST00000504409 MIER1Q8N108 512 aa7.7□□□□□ -1.18
LINC02397-201ENST00000504409 VPS8Q8N3P4 1428 aa7.7□□□□□ -1.18
LINC02397-201ENST00000504409 ANKRD30AQ9BXX3 1397 aa7.7□□□□□ -1.18
LINC02397-201ENST00000504409 PES1O00541 588 aaKnown RBP7.69□□□□□ -1.18
LINC02397-201ENST00000504409 PLEKHH2Q8IVE3 1493 aa7.69□□□□□ -1.18
LINC02397-201ENST00000504409 CCNB3Q8WWL7 1395 aa7.68□□□□□ -1.18
LINC02397-201ENST00000504409 CREBRFQ8IUR6 639 aa7.68□□□□□ -1.18
LINC02397-201ENST00000504409 TMC1Q8TDI8 760 aa7.68□□□□□ -1.18
LINC02397-201ENST00000504409 GOLGA6L4A6NEF3 574 aa7.68□□□□□ -1.18
LINC02397-201ENST00000504409 FAM193AP78312 1265 aa7.68□□□□□ -1.18
LINC02397-201ENST00000504409 CTR9Q6PD62 1173 aa7.67□□□□□ -1.18
LINC02397-201ENST00000504409 ZBED9Q6R2W3 1325 aa7.67□□□□□ -1.18
LINC02397-201ENST00000504409 HOMEZQ8IX15 550 aa7.67□□□□□ -1.18
LINC02397-201ENST00000504409 KIF3AQ9Y496 699 aa7.66□□□□□ -1.18
LINC02397-201ENST00000504409 KIF21BO75037 1637 aa7.66□□□□□ -1.18
LINC02397-201ENST00000504409 CHMP4AQ9BY43 222 aa7.66□□□□□ -1.18
LINC02397-201ENST00000504409 NPM2Q86SE8 214 aaKnown RBP7.65□□□□□ -1.18
LINC02397-201ENST00000504409 FAM107BQ9H098 131 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 148 ms