RNA–Protein interactions for RNA: ENST00000504311.5

MATR3-209, Transcript of matrin 3, humanhuman

TSL 3

Gene MATR3, Length 423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-209ENST00000504311 VASPP50552 380 aaPredicted RBP12.01□□□□□ -0.49
MATR3-209ENST00000504311 PELP1Q8IZL8 1130 aaKnown RBP11.98□□□□□ -0.49
MATR3-209ENST00000504311 POTEMA6NI47 508 aa11.96□□□□□ -0.49
MATR3-209ENST00000504311 ASTLQ6HA08 431 aaPredicted RBP11.94□□□□□ -0.5
MATR3-209ENST00000504311 MS4A3Q96HJ5 214 aa11.92□□□□□ -0.5
MATR3-209ENST00000504311 C7P10643 843 aa11.91□□□□□ -0.5
MATR3-209ENST00000504311 POTEGQ6S5H5 508 aa11.91□□□□□ -0.5
MATR3-209ENST00000504311 SLC39A7Q92504 469 aa11.91□□□□□ -0.5
MATR3-209ENST00000504311 METRNQ9UJH8 293 aa11.91□□□□□ -0.5
MATR3-209ENST00000504311 ATMINO43313 823 aaPredicted RBP11.89□□□□□ -0.51
MATR3-209ENST00000504311 IFNLR1Q8IU57 520 aaPredicted RBP11.88□□□□□ -0.51
MATR3-209ENST00000504311 MAMSTRQ6ZN01 415 aa11.86□□□□□ -0.51
MATR3-209ENST00000504311 MIER1Q8N108 512 aa11.86□□□□□ -0.51
MATR3-209ENST00000504311 PLCD3Q8N3E9 789 aa11.86□□□□□ -0.51
MATR3-209ENST00000504311 PCDH10Q9P2E7 1040 aa11.86□□□□□ -0.51
MATR3-209ENST00000504311 KLHL34Q8N239 644 aa11.84□□□□□ -0.51
MATR3-209ENST00000504311 POTEJP0CG39 1038 aa11.83□□□□□ -0.52
MATR3-209ENST00000504311 TSPYL2Q9H2G4 693 aaPredicted RBP11.79□□□□□ -0.52
MATR3-209ENST00000504311 CCDC61Q9Y6R9 512 aa11.78□□□□□ -0.52
MATR3-209ENST00000504311 PLEKHG5O94827 1062 aa11.77□□□□□ -0.53
MATR3-209ENST00000504311 ATN1P54259 1190 aaPredicted RBP11.76□□□□□ -0.53
MATR3-209ENST00000504311 SCUBE2Q9NQ36 999 aa11.76□□□□□ -0.53
MATR3-209ENST00000504311 KIF12Q96FN5 646 aa11.73□□□□□ -0.53
MATR3-209ENST00000504311 SPOCK2Q92563 424 aa11.72□□□□□ -0.53
MATR3-209ENST00000504311 LCE2DQ5TA82 110 aaPredicted RBP11.7□□□□□ -0.54
MATR3-209ENST00000504311 BMP2KQ9NSY1 1161 aaPredicted RBP11.69□□□□□ -0.54
MATR3-209ENST00000504311 FAM163AQ96GL9 167 aaPredicted RBP11.68□□□□□ -0.54
MATR3-209ENST00000504311 ZBTB47Q9UFB7 747 aaPredicted RBP11.67□□□□□ -0.54
MATR3-209ENST00000504311 TIE1P35590 1138 aa11.66□□□□□ -0.54
MATR3-209ENST00000504311 POTEFA5A3E0 1075 aa11.65□□□□□ -0.54
MATR3-209ENST00000504311 MAP3K13O43283 966 aa11.63□□□□□ -0.55
MATR3-209ENST00000504311 TRPC6Q9Y210 931 aa11.63□□□□□ -0.55
MATR3-209ENST00000504311 RASEFQ8IZ41 740 aa11.58□□□□□ -0.56
MATR3-209ENST00000504311 PKD2Q13563 968 aa11.57□□□□□ -0.56
MATR3-209ENST00000504311 TTLL13PA6NNM8 815 aa11.56□□□□□ -0.56
MATR3-209ENST00000504311 SEC24BO95487 1268 aa11.56□□□□□ -0.56
MATR3-209ENST00000504311 SGIP1Q9BQI5 828 aa11.54□□□□□ -0.56
MATR3-209ENST00000504311 CIZ1Q9ULV3 898 aaPredicted RBP11.54□□□□□ -0.56
MATR3-209ENST00000504311 COLQQ9Y215 455 aaPredicted RBP11.54□□□□□ -0.56
MATR3-209ENST00000504311 IER5LQ5T953 404 aa11.53□□□□□ -0.56
MATR3-209ENST00000504311 DCAF8L2P0C7V8 631 aa11.51□□□□□ -0.57
MATR3-209ENST00000504311 ECM2O94769 699 aaPredicted RBP11.49□□□□□ -0.57
MATR3-209ENST00000504311 TRIM35Q9UPQ4 493 aa11.48□□□□□ -0.57
MATR3-209ENST00000504311 PCDHB13Q9Y5F0 798 aa11.47□□□□□ -0.57
MATR3-209ENST00000504311 DCAF8Q5TAQ9 597 aa11.45□□□□□ -0.58
MATR3-209ENST00000504311 CDAN1Q8IWY9 1227 aa11.45□□□□□ -0.58
MATR3-209ENST00000504311 NUBP1P53384 320 aa11.44□□□□□ -0.58
MATR3-209ENST00000504311 GSE1Q14687 1217 aa11.43□□□□□ -0.58
MATR3-209ENST00000504311 SLAIN1Q8ND83 568 aa11.4□□□□□ -0.58
MATR3-209ENST00000504311 IFNL1Q8IU54 200 aa11.39□□□□□ -0.59
MATR3-209ENST00000504311 ST18O60284 1047 aa11.37□□□□□ -0.59
MATR3-209ENST00000504311 FAM212AQ96EL1 285 aa11.37□□□□□ -0.59
MATR3-209ENST00000504311 TRIM41Q8WV44 630 aa11.36□□□□□ -0.59
MATR3-209ENST00000504311 TMEM106CQ9BVX2 250 aa11.36□□□□□ -0.59
MATR3-209ENST00000504311 RGL2O15211 777 aa11.35□□□□□ -0.59
MATR3-209ENST00000504311 PLCG2P16885 1265 aa11.35□□□□□ -0.59
MATR3-209ENST00000504311 IRX5P78411 483 aaPredicted RBP11.31□□□□□ -0.6
MATR3-209ENST00000504311 SLC24A1O60721 1099 aa11.28□□□□□ -0.6
MATR3-209ENST00000504311 TMEM121BQ9BXQ6 578 aaPredicted RBP11.27□□□□□ -0.61
MATR3-209ENST00000504311 OCEL1Q9H607 264 aa11.25□□□□□ -0.61
MATR3-209ENST00000504311 SNPHO15079 494 aa11.24□□□□□ -0.61
MATR3-209ENST00000504311 PYGBP11216 843 aa11.23□□□□□ -0.61
MATR3-209ENST00000504311 CHRM1P11229 460 aaPredicted RBP11.21□□□□□ -0.61
MATR3-209ENST00000504311 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.2□□□□□ -0.62
MATR3-209ENST00000504311 CHGAP10645 457 aaKnown RBP11.19□□□□□ -0.62
MATR3-209ENST00000504311 SPNS2Q8IVW8 549 aa11.19□□□□□ -0.62
MATR3-209ENST00000504311 RIOK3O14730 519 aaKnown RBP11.18□□□□□ -0.62
MATR3-209ENST00000504311 MMRN1Q13201 1228 aa11.18□□□□□ -0.62
MATR3-209ENST00000504311 RNF25Q96BH1 459 aaPredicted RBP11.18□□□□□ -0.62
MATR3-209ENST00000504311 TAOK2Q9UL54 1235 aa11.17□□□□□ -0.62
MATR3-209ENST00000504311 BBXQ8WY36 941 aaPredicted RBP11.16□□□□□ -0.62
MATR3-209ENST00000504311 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.16□□□□□ -0.62
MATR3-209ENST00000504311 PLCB2Q00722 1185 aa11.15□□□□□ -0.62
MATR3-209ENST00000504311 PCDHB8Q9UN66 801 aa11.13□□□□□ -0.63
MATR3-209ENST00000504311 MARVELD3Q96A59 401 aa11.12□□□□□ -0.63
MATR3-209ENST00000504311 VGFO15240 615 aaPredicted RBP11.1□□□□□ -0.63
MATR3-209ENST00000504311 C3orf67Q6ZVT6 689 aa11.07□□□□□ -0.64
MATR3-209ENST00000504311 PAXIP1Q6ZW49 1069 aaPredicted RBP11.07□□□□□ -0.64
MATR3-209ENST00000504311 HS6ST3Q8IZP7 471 aa11.07□□□□□ -0.64
MATR3-209ENST00000504311 PDCD7Q8N8D1 485 aaKnown RBP11.07□□□□□ -0.64
MATR3-209ENST00000504311 CFAP44Q96MT7 982 aa11.07□□□□□ -0.64
MATR3-209ENST00000504311 STK25O00506 426 aa11.06□□□□□ -0.64
MATR3-209ENST00000504311 L3MBTL3Q96JM7 780 aaPredicted RBP11.06□□□□□ -0.64
MATR3-209ENST00000504311 ZNF467Q7Z7K2 595 aaPredicted RBP11.05□□□□□ -0.64
MATR3-209ENST00000504311 HAP1P54257 671 aaPredicted RBP11.04□□□□□ -0.64
MATR3-209ENST00000504311 GOLGA2Q08379 1002 aa11.04□□□□□ -0.64
MATR3-209ENST00000504311 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.03□□□□□ -0.64
MATR3-209ENST00000504311 EMP3P54852 163 aa11.03□□□□□ -0.64
MATR3-209ENST00000504311 MKRN3Q13064 507 aaKnown RBP11.03□□□□□ -0.64
MATR3-209ENST00000504311 SPRYD3Q8NCJ5 442 aa11.03□□□□□ -0.64
MATR3-209ENST00000504311 ZFP91Q96JP5 570 aaPredicted RBP11.03□□□□□ -0.64
MATR3-209ENST00000504311 STK24Q9Y6E0 443 aa11.02□□□□□ -0.65
MATR3-209ENST00000504311 BCL11BQ9C0K0 894 aaPredicted RBP11□□□□□ -0.65
MATR3-209ENST00000504311 PDAP1Q13442 181 aaKnown RBP10.97□□□□□ -0.65
MATR3-209ENST00000504311 HS3ST6Q96QI5 342 aa10.97□□□□□ -0.65
MATR3-209ENST00000504311 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.97□□□□□ -0.652e-9■■□□□ 14.4
MATR3-209ENST00000504311 PSEN1P49768 467 aa10.95□□□□□ -0.66
MATR3-209ENST00000504311 KRTAP3-3Q9BYR6 98 aa10.95□□□□□ -0.66
MATR3-209ENST00000504311 KRTAP3-2Q9BYR7 98 aa10.95□□□□□ -0.66
MATR3-209ENST00000504311 POTEB3A0JP26 581 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms