RNA–Protein interactions for RNA: ENST00000503315.5

PTCD2-206, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 1,440 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-206ENST00000503315 U3KPZ7 1027 aaPredicted RBP13.03□□□□□ -0.32
PTCD2-206ENST00000503315 MROH2BQ7Z745 1585 aa13□□□□□ -0.33
PTCD2-206ENST00000503315 BAZ1BQ9UIG0 1483 aaKnown RBP13□□□□□ -0.33
PTCD2-206ENST00000503315 NPM1P06748 294 aaKnown RBP eCLIP13□□□□□ -0.33
PTCD2-206ENST00000503315 KLHL34Q8N239 644 aa13□□□□□ -0.33
PTCD2-206ENST00000503315 SPOCK2Q92563 424 aa13□□□□□ -0.33
PTCD2-206ENST00000503315 TSHZ2Q9NRE2 1034 aa12.99□□□□□ -0.33
PTCD2-206ENST00000503315 SPINK5Q9NQ38 1064 aaPredicted RBP12.97□□□□□ -0.33
PTCD2-206ENST00000503315 ERCC6Q03468 1493 aa12.95□□□□□ -0.34
PTCD2-206ENST00000503315 NESP48681 1621 aa12.95□□□□□ -0.34
PTCD2-206ENST00000503315 CUX2O14529 1486 aa12.94□□□□□ -0.34
PTCD2-206ENST00000503315 HOMEZQ8IX15 550 aa12.91□□□□□ -0.34
PTCD2-206ENST00000503315 MKRN4PQ13434 485 aaPredicted RBP12.9□□□□□ -0.34
PTCD2-206ENST00000503315 DNAJC5Q9H3Z4 198 aa12.9□□□□□ -0.34
PTCD2-206ENST00000503315 LAMC3Q9Y6N6 1575 aa12.89□□□□□ -0.35
PTCD2-206ENST00000503315 WIZO95785 1651 aa12.88□□□□□ -0.35
PTCD2-206ENST00000503315 RGL2O15211 777 aa12.83□□□□□ -0.36
PTCD2-206ENST00000503315 KIF21AQ7Z4S6 1674 aa12.82□□□□□ -0.36
PTCD2-206ENST00000503315 THOC2Q8NI27 1593 aaKnown RBP12.81□□□□□ -0.36
PTCD2-206ENST00000503315 TMEM132AQ24JP5 1023 aa12.81□□□□□ -0.36
PTCD2-206ENST00000503315 CHGAP10645 457 aaKnown RBP12.79□□□□□ -0.36
PTCD2-206ENST00000503315 PDS5BQ9NTI5 1447 aa12.78□□□□□ -0.36
PTCD2-206ENST00000503315 C14orf37Q86TY3 774 aa12.78□□□□□ -0.36
PTCD2-206ENST00000503315 CADPSQ9ULU8 1353 aa12.78□□□□□ -0.36
PTCD2-206ENST00000503315 RSF1Q96T23 1441 aaPredicted RBP12.75□□□□□ -0.37
PTCD2-206ENST00000503315 PLCD3Q8N3E9 789 aa12.71□□□□□ -0.37
PTCD2-206ENST00000503315 STAG3Q9UJ98 1225 aa12.7□□□□□ -0.38
PTCD2-206ENST00000503315 TOP2AP11388 1531 aaKnown RBP12.67□□□□□ -0.38
PTCD2-206ENST00000503315 CFTRP13569 1480 aa12.65□□□□□ -0.38
PTCD2-206ENST00000503315 MRC2Q9UBG0 1479 aa12.65□□□□□ -0.38
PTCD2-206ENST00000503315 ABCB7O75027 752 aa12.65□□□□□ -0.38
PTCD2-206ENST00000503315 TRHP20396 242 aaPredicted RBP12.65□□□□□ -0.38
PTCD2-206ENST00000503315 WDR62O43379 1518 aa12.64□□□□□ -0.39
PTCD2-206ENST00000503315 CIZ1Q9ULV3 898 aaPredicted RBP12.62□□□□□ -0.39
PTCD2-206ENST00000503315 FANCD2Q9BXW9 1451 aa12.62□□□□□ -0.39
PTCD2-206ENST00000503315 CEP164Q9UPV0 1460 aa12.62□□□□□ -0.39
PTCD2-206ENST00000503315 CHRDL2Q6WN34 429 aa12.62□□□□□ -0.39
PTCD2-206ENST00000503315 SP7Q8TDD2 431 aaPredicted RBP12.61□□□□□ -0.39
PTCD2-206ENST00000503315 PRDM2Q13029 1718 aa12.59□□□□□ -0.39
PTCD2-206ENST00000503315 TRIM41Q8WV44 630 aa12.59□□□□□ -0.39
PTCD2-206ENST00000503315 RBM42Q9BTD8 480 aaKnown RBP12.59□□□□□ -0.39
PTCD2-206ENST00000503315 HS6ST3Q8IZP7 471 aa12.58□□□□□ -0.4
PTCD2-206ENST00000503315 POLA2Q14181 598 aa12.56□□□□□ -0.4
PTCD2-206ENST00000503315 MIER1Q8N108 512 aa12.55□□□□□ -0.4
PTCD2-206ENST00000503315 ZBTB12Q9Y330 459 aaPredicted RBP12.55□□□□□ -0.4
PTCD2-206ENST00000503315 CCDC88BA6NC98 1476 aa12.55□□□□□ -0.4
PTCD2-206ENST00000503315 PLEKHG5O94827 1062 aa12.54□□□□□ -0.4
PTCD2-206ENST00000503315 ZBTB47Q9UFB7 747 aaPredicted RBP12.53□□□□□ -0.4
PTCD2-206ENST00000503315 URB2Q14146 1524 aaKnown RBP12.52□□□□□ -0.4
PTCD2-206ENST00000503315 RANGAP1P46060 587 aaPredicted RBP12.48□□□□□ -0.41
PTCD2-206ENST00000503315 P3H3Q8IVL6 736 aa12.41□□□□□ -0.42
PTCD2-206ENST00000503315 ZNF692Q9BU19 519 aaPredicted RBP12.4□□□□□ -0.42
PTCD2-206ENST00000503315 TOPBP1Q92547 1522 aa12.4□□□□□ -0.43
PTCD2-206ENST00000503315 ABCC8Q09428 1581 aa12.39□□□□□ -0.43
PTCD2-206ENST00000503315 OSCARQ8IYS5 282 aa12.38□□□□□ -0.43
PTCD2-206ENST00000503315 IFT140Q96RY7 1462 aa12.37□□□□□ -0.43
PTCD2-206ENST00000503315 ZNF608Q9ULD9 1512 aaPredicted RBP12.36□□□□□ -0.43
PTCD2-206ENST00000503315 DNMBPQ6XZF7 1577 aa12.36□□□□□ -0.43
PTCD2-206ENST00000503315 GTPBP6O43824 516 aaPredicted RBP12.33□□□□□ -0.44
PTCD2-206ENST00000503315 PODXL2Q9NZ53 605 aa12.33□□□□□ -0.44
PTCD2-206ENST00000503315 GSE1Q14687 1217 aa12.32□□□□□ -0.44
PTCD2-206ENST00000503315 RYDENQ9NUL5 291 aaKnown RBP12.32□□□□□ -0.44
PTCD2-206ENST00000503315 SUPT5HO00267 1087 aaKnown RBP12.31□□□□□ -0.44
PTCD2-206ENST00000503315 TARBP1Q13395 1621 aaKnown RBP12.31□□□□□ -0.44
PTCD2-206ENST00000503315 NKX1-1Q15270 411 aaPredicted RBP12.29□□□□□ -0.44
PTCD2-206ENST00000503315 EIF4G3O43432 1585 aaKnown RBP12.29□□□□□ -0.44
PTCD2-206ENST00000503315 LMOD2Q6P5Q4 547 aa12.28□□□□□ -0.44
PTCD2-206ENST00000503315 POLA1P09884 1462 aaPredicted RBP12.27□□□□□ -0.44
PTCD2-206ENST00000503315 AQRO60306 1485 aaKnown RBP eCLIP12.26□□□□□ -0.45
PTCD2-206ENST00000503315 RIOK3O14730 519 aaKnown RBP12.26□□□□□ -0.45
PTCD2-206ENST00000503315 SPDYE2BA6NHP3 402 aa12.25□□□□□ -0.45
PTCD2-206ENST00000503315 STK25O00506 426 aa12.25□□□□□ -0.45
PTCD2-206ENST00000503315 SPDYE6P0CI01 402 aa12.25□□□□□ -0.45
PTCD2-206ENST00000503315 SPDYE2Q495Y8 402 aa12.25□□□□□ -0.45
PTCD2-206ENST00000503315 BRPF1P55201 1214 aaPredicted RBP12.24□□□□□ -0.45
PTCD2-206ENST00000503315 RNF25Q96BH1 459 aaPredicted RBP12.24□□□□□ -0.45
PTCD2-206ENST00000503315 CHD1O14646 1710 aa12.23□□□□□ -0.45
PTCD2-206ENST00000503315 RAD54L2Q9Y4B4 1467 aa12.23□□□□□ -0.45
PTCD2-206ENST00000503315 SOGA1O94964 1423 aa12.22□□□□□ -0.45
PTCD2-206ENST00000503315 HAX1O00165 279 aa12.22□□□□□ -0.45
PTCD2-206ENST00000503315 RIMBP3CA6NJZ7 1639 aa12.22□□□□□ -0.45
PTCD2-206ENST00000503315 RIMBP3BA6NNM3 1639 aa12.22□□□□□ -0.45
PTCD2-206ENST00000503315 RIMBP3Q9UFD9 1639 aa12.22□□□□□ -0.45
PTCD2-206ENST00000503315 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.21□□□□□ -0.45
PTCD2-206ENST00000503315 WDR70Q9NW82 654 aa12.21□□□□□ -0.45
PTCD2-206ENST00000503315 CUX1P39880 1505 aa12.21□□□□□ -0.46
PTCD2-206ENST00000503315 SSUH2Q9Y2M2 353 aa12.2□□□□□ -0.46
PTCD2-206ENST00000503315 FGD5Q6ZNL6 1462 aa12.2□□□□□ -0.46
PTCD2-206ENST00000503315 NEUROD2Q15784 382 aa12.19□□□□□ -0.46
PTCD2-206ENST00000503315 TDRD9Q8NDG6 1382 aaKnown RBP12.18□□□□□ -0.46
PTCD2-206ENST00000503315 VGFO15240 615 aaPredicted RBP12.18□□□□□ -0.46
PTCD2-206ENST00000503315 WDR97A6NE52 1622 aa12.17□□□□□ -0.46
PTCD2-206ENST00000503315 ARHGEF11O15085 1522 aa12.16□□□□□ -0.46
PTCD2-206ENST00000503315 DCAF8Q5TAQ9 597 aa12.12□□□□□ -0.47
PTCD2-206ENST00000503315 PIP4P2Q8N4L2 257 aa12.12□□□□□ -0.47
PTCD2-206ENST00000503315 SNAPC4Q5SXM2 1469 aa12.11□□□□□ -0.47
PTCD2-206ENST00000503315 PBRM1Q86U86 1689 aa12.1□□□□□ -0.47
PTCD2-206ENST00000503315 AKT1S1Q96B36 256 aa12.1□□□□□ -0.47
PTCD2-206ENST00000503315 GRIN2BQ13224 1484 aa12.1□□□□□ -0.47
PTCD2-206ENST00000503315 MAGI1Q96QZ7 1491 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms