RNA–Protein interactions for RNA: ENST00000503299.1

AC109349.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC109349.1, Length 758 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC109349.1-201ENST00000503299 CSRNP3Q8WYN3 585 aa16.22■□□□□ 0.19
AC109349.1-201ENST00000503299 SLC39A7Q92504 469 aa16.22■□□□□ 0.19
AC109349.1-201ENST00000503299 ATMINO43313 823 aaPredicted RBP16.2■□□□□ 0.18
AC109349.1-201ENST00000503299 MS4A3Q96HJ5 214 aa16.2■□□□□ 0.18
AC109349.1-201ENST00000503299 POTEJP0CG39 1038 aa16.19■□□□□ 0.18
AC109349.1-201ENST00000503299 MAMSTRQ6ZN01 415 aa16.18■□□□□ 0.18
AC109349.1-201ENST00000503299 LCE2DQ5TA82 110 aaPredicted RBP16.06■□□□□ 0.16
AC109349.1-201ENST00000503299 FAM163AQ96GL9 167 aaPredicted RBP16.03■□□□□ 0.16
AC109349.1-201ENST00000503299 SCUBE2Q9NQ36 999 aa16.03■□□□□ 0.16
AC109349.1-201ENST00000503299 ATN1P54259 1190 aaPredicted RBP16.01■□□□□ 0.15
AC109349.1-201ENST00000503299 TSPYL2Q9H2G4 693 aaPredicted RBP15.99■□□□□ 0.15
AC109349.1-201ENST00000503299 CCDC61Q9Y6R9 512 aa15.97■□□□□ 0.15
AC109349.1-201ENST00000503299 KIF12Q96FN5 646 aa15.92■□□□□ 0.14
AC109349.1-201ENST00000503299 POTEFA5A3E0 1075 aa15.9■□□□□ 0.14
AC109349.1-201ENST00000503299 BMP2KQ9NSY1 1161 aaPredicted RBP15.88■□□□□ 0.13
AC109349.1-201ENST00000503299 TRPC6Q9Y210 931 aa15.82■□□□□ 0.12
AC109349.1-201ENST00000503299 TIE1P35590 1138 aa15.81■□□□□ 0.12
AC109349.1-201ENST00000503299 MAP3K13O43283 966 aa15.78■□□□□ 0.12
AC109349.1-201ENST00000503299 PROM2Q8N271 834 aa15.77■□□□□ 0.12
AC109349.1-201ENST00000503299 SEC24BO95487 1268 aa15.73■□□□□ 0.11
AC109349.1-201ENST00000503299 COLQQ9Y215 455 aaPredicted RBP15.73■□□□□ 0.11
AC109349.1-201ENST00000503299 CDAN1Q8IWY9 1227 aa15.72■□□□□ 0.11
AC109349.1-201ENST00000503299 TTLL13PA6NNM8 815 aa15.69■□□□□ 0.1
AC109349.1-201ENST00000503299 RASEFQ8IZ41 740 aa15.66■□□□□ 0.1
AC109349.1-201ENST00000503299 PLEKHG5O94827 1062 aa15.65■□□□□ 0.1
AC109349.1-201ENST00000503299 IER5LQ5T953 404 aa15.64■□□□□ 0.09
AC109349.1-201ENST00000503299 MIER1Q8N108 512 aa15.61■□□□□ 0.09
AC109349.1-201ENST00000503299 EHMT2Q96KQ7 1210 aa15.6■□□□□ 0.09
AC109349.1-201ENST00000503299 TRIM35Q9UPQ4 493 aa15.59■□□□□ 0.09
AC109349.1-201ENST00000503299 SGIP1Q9BQI5 828 aa15.58■□□□□ 0.08
AC109349.1-201ENST00000503299 ST18O60284 1047 aa15.55■□□□□ 0.08
AC109349.1-201ENST00000503299 SLAIN1Q8ND83 568 aa15.55■□□□□ 0.08
AC109349.1-201ENST00000503299 PCDHB13Q9Y5F0 798 aa15.53■□□□□ 0.08
AC109349.1-201ENST00000503299 IFNL1Q8IU54 200 aa15.42■□□□□ 0.06
AC109349.1-201ENST00000503299 PLCG2P16885 1265 aa15.41■□□□□ 0.06
AC109349.1-201ENST00000503299 TMEM106CQ9BVX2 250 aa15.4■□□□□ 0.06
AC109349.1-201ENST00000503299 MMRN1Q13201 1228 aa15.38■□□□□ 0.05
AC109349.1-201ENST00000503299 PLCD3Q8N3E9 789 aa15.38■□□□□ 0.05
AC109349.1-201ENST00000503299 NUBP1P53384 320 aa15.37■□□□□ 0.05
AC109349.1-201ENST00000503299 SPNS2Q8IVW8 549 aa15.36■□□□□ 0.05
AC109349.1-201ENST00000503299 IRX5P78411 483 aaPredicted RBP15.35■□□□□ 0.05
AC109349.1-201ENST00000503299 TMEM121BQ9BXQ6 578 aaPredicted RBP15.35■□□□□ 0.05
AC109349.1-201ENST00000503299 ZBTB47Q9UFB7 747 aaPredicted RBP15.34■□□□□ 0.05
AC109349.1-201ENST00000503299 SNPHO15079 494 aa15.29■□□□□ 0.04
AC109349.1-201ENST00000503299 FAM212AQ96EL1 285 aa15.27■□□□□ 0.04
AC109349.1-201ENST00000503299 OCEL1Q9H607 264 aa15.27■□□□□ 0.04
AC109349.1-201ENST00000503299 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.23■□□□□ 0.03
AC109349.1-201ENST00000503299 MARVELD3Q96A59 401 aa15.2■□□□□ 0.02
AC109349.1-201ENST00000503299 PYGBP11216 843 aa15.07■□□□□ 0
AC109349.1-201ENST00000503299 DCAF8Q5TAQ9 597 aa15.06■□□□□ 0
AC109349.1-201ENST00000503299 PCDHB8Q9UN66 801 aa15.05■□□□□ -0
AC109349.1-201ENST00000503299 EMP3P54852 163 aa15.04■□□□□ -0
AC109349.1-201ENST00000503299 PDCD7Q8N8D1 485 aaKnown RBP15.01□□□□□ -0.01
AC109349.1-201ENST00000503299 C3orf67Q6ZVT6 689 aa15□□□□□ -0.01
AC109349.1-201ENST00000503299 L3MBTL3Q96JM7 780 aaPredicted RBP14.98□□□□□ -0.01
AC109349.1-201ENST00000503299 KRTAP3-3Q9BYR6 98 aa14.98□□□□□ -0.01
AC109349.1-201ENST00000503299 KRTAP3-2Q9BYR7 98 aa14.98□□□□□ -0.01
AC109349.1-201ENST00000503299 HS3ST6Q96QI5 342 aa14.97□□□□□ -0.01
AC109349.1-201ENST00000503299 POTEB3A0JP26 581 aa14.96□□□□□ -0.01
AC109349.1-201ENST00000503299 POTEBQ6S5H4 581 aa14.96□□□□□ -0.01
AC109349.1-201ENST00000503299 FAM205CA6NFA0 338 aa14.93□□□□□ -0.02
AC109349.1-201ENST00000503299 MKRN3Q13064 507 aaKnown RBP14.92□□□□□ -0.02
AC109349.1-201ENST00000503299 GOLGA2Q08379 1002 aa14.9□□□□□ -0.02
AC109349.1-201ENST00000503299 ZNF467Q7Z7K2 595 aaPredicted RBP14.87□□□□□ -0.03
AC109349.1-201ENST00000503299 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.85□□□□□ -0.03
AC109349.1-201ENST00000503299 GSE1Q14687 1217 aa14.77□□□□□ -0.05
AC109349.1-201ENST00000503299 CHRM1P11229 460 aaPredicted RBP14.75□□□□□ -0.05
AC109349.1-201ENST00000503299 PSEN1P49768 467 aa14.75□□□□□ -0.05
AC109349.1-201ENST00000503299 FKBP8Q14318 412 aa14.75□□□□□ -0.05
AC109349.1-201ENST00000503299 ILDR1Q86SU0 546 aaPredicted RBP14.75□□□□□ -0.05
AC109349.1-201ENST00000503299 HOXB3P14651 431 aaPredicted RBP14.72□□□□□ -0.05
AC109349.1-201ENST00000503299 DPY19L2Q6NUT2 758 aa14.7□□□□□ -0.06
AC109349.1-201ENST00000503299 FBXO3Q9UK99 471 aa14.69□□□□□ -0.06
AC109349.1-201ENST00000503299 HOXB1P14653 301 aaPredicted RBP14.67□□□□□ -0.06
AC109349.1-201ENST00000503299 G3V3G9 751 aa14.65□□□□□ -0.06
AC109349.1-201ENST00000503299 BOLA1Q9Y3E2 137 aa14.65□□□□□ -0.06
AC109349.1-201ENST00000503299 ZNF710Q8N1W2 664 aa14.64□□□□□ -0.07
AC109349.1-201ENST00000503299 KLHL34Q8N239 644 aa14.64□□□□□ -0.07
AC109349.1-201ENST00000503299 ERBB3P21860 1342 aa14.64□□□□□ -0.07
AC109349.1-201ENST00000503299 RNF166Q96A37 237 aaPredicted RBP14.62□□□□□ -0.07
AC109349.1-201ENST00000503299 PDAP1Q13442 181 aaKnown RBP14.61□□□□□ -0.07
AC109349.1-201ENST00000503299 DOK7Q18PE1 504 aa14.6□□□□□ -0.07
AC109349.1-201ENST00000503299 CABP2Q9NPB3 220 aa14.56□□□□□ -0.08
AC109349.1-201ENST00000503299 MYT1LQ9UL68 1186 aa14.53□□□□□ -0.08
AC109349.1-201ENST00000503299 VASPP50552 380 aaPredicted RBP14.51□□□□□ -0.09
AC109349.1-201ENST00000503299 RIMBP2O15034 1052 aa14.5□□□□□ -0.09
AC109349.1-201ENST00000503299 VARS2Q5ST30 1063 aaKnown RBP14.5□□□□□ -0.09
AC109349.1-201ENST00000503299 ZNF687Q8N1G0 1237 aa14.44□□□□□ -0.1
AC109349.1-201ENST00000503299 ZSWIM6Q9HCJ5 1215 aa14.42□□□□□ -0.1
AC109349.1-201ENST00000503299 PTGER2P43116 358 aa14.39□□□□□ -0.11
AC109349.1-201ENST00000503299 GPR153Q6NV75 609 aa14.35□□□□□ -0.11
AC109349.1-201ENST00000503299 CIZ1Q9ULV3 898 aaPredicted RBP14.34□□□□□ -0.11
AC109349.1-201ENST00000503299 TMEM92Q6UXU6 159 aa14.32□□□□□ -0.12
AC109349.1-201ENST00000503299 EFCAB3Q8N7B9 438 aa14.31□□□□□ -0.12
AC109349.1-201ENST00000503299 MICALL2Q8IY33 904 aa14.3□□□□□ -0.12
AC109349.1-201ENST00000503299 SPOCK2Q92563 424 aa14.3□□□□□ -0.12
AC109349.1-201ENST00000503299 ANKRD13DQ6ZTN6 518 aa14.25□□□□□ -0.13
AC109349.1-201ENST00000503299 ARSIQ5FYB1 569 aa14.21□□□□□ -0.13
AC109349.1-201ENST00000503299 IFNLR1Q8IU57 520 aaPredicted RBP14.19□□□□□ -0.14
AC109349.1-201ENST00000503299 ZNF316A6NFI3 1004 aaPredicted RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms