RNA–Protein interactions for RNA: ENST00000502840.5

CDC42SE2-205, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-205ENST00000502840 POTEJP0CG39 1038 aa8.41□□□□□ -1.06
CDC42SE2-205ENST00000502840 MMRN1Q13201 1228 aa8.41□□□□□ -1.06
CDC42SE2-205ENST00000502840 ZRANB1Q9UGI0 708 aa8.4□□□□□ -1.06
CDC42SE2-205ENST00000502840 PELP1Q8IZL8 1130 aaKnown RBP8.37□□□□□ -1.07
CDC42SE2-205ENST00000502840 SCUBE2Q9NQ36 999 aa8.37□□□□□ -1.07
CDC42SE2-205ENST00000502840 FBXO3Q9UK99 471 aa8.36□□□□□ -1.07
CDC42SE2-205ENST00000502840 C7P10643 843 aa8.35□□□□□ -1.07
CDC42SE2-205ENST00000502840 MIER1Q8N108 512 aa8.35□□□□□ -1.07
CDC42SE2-205ENST00000502840 METRNQ9UJH8 293 aa8.35□□□□□ -1.07
CDC42SE2-205ENST00000502840 NPM1P06748 294 aaKnown RBP eCLIP8.33□□□□□ -1.08
CDC42SE2-205ENST00000502840 SLC39A7Q92504 469 aa8.33□□□□□ -1.08
CDC42SE2-205ENST00000502840 SPNS2Q8IVW8 549 aa8.32□□□□□ -1.08
CDC42SE2-205ENST00000502840 PLCD3Q8N3E9 789 aa8.32□□□□□ -1.08
CDC42SE2-205ENST00000502840 PLEKHG5O94827 1062 aa8.31□□□□□ -1.08
CDC42SE2-205ENST00000502840 VASPP50552 380 aaPredicted RBP8.27□□□□□ -1.09
CDC42SE2-205ENST00000502840 ASTLQ6HA08 431 aaPredicted RBP8.27□□□□□ -1.09
CDC42SE2-205ENST00000502840 ZBTB47Q9UFB7 747 aaPredicted RBP8.25□□□□□ -1.09
CDC42SE2-205ENST00000502840 PAK3O75914 559 aaPredicted RBP8.23□□□□□ -1.09
CDC42SE2-205ENST00000502840 NUBP1P53384 320 aa8.21□□□□□ -1.1
CDC42SE2-205ENST00000502840 RASEFQ8IZ41 740 aa8.21□□□□□ -1.1
CDC42SE2-205ENST00000502840 ATMINO43313 823 aaPredicted RBP8.19□□□□□ -1.1
CDC42SE2-205ENST00000502840 TSPYL2Q9H2G4 693 aaPredicted RBP8.19□□□□□ -1.1
CDC42SE2-205ENST00000502840 PHF12Q96QT6 1004 aa8.18□□□□□ -1.1
CDC42SE2-205ENST00000502840 CCDC61Q9Y6R9 512 aa8.18□□□□□ -1.1
CDC42SE2-205ENST00000502840 IFNLR1Q8IU57 520 aaPredicted RBP8.16□□□□□ -1.1
CDC42SE2-205ENST00000502840 KLHL34Q8N239 644 aa8.14□□□□□ -1.11
CDC42SE2-205ENST00000502840 ST18O60284 1047 aa8.12□□□□□ -1.11
CDC42SE2-205ENST00000502840 FAM212AQ96EL1 285 aa8.11□□□□□ -1.11
CDC42SE2-205ENST00000502840 KIF12Q96FN5 646 aa8.1□□□□□ -1.11
CDC42SE2-205ENST00000502840 MS4A3Q96HJ5 214 aa8.1□□□□□ -1.11
CDC42SE2-205ENST00000502840 MAP3K13O43283 966 aa8.06□□□□□ -1.12
CDC42SE2-205ENST00000502840 DCAF8Q5TAQ9 597 aa8.06□□□□□ -1.12
CDC42SE2-205ENST00000502840 SPOCK2Q92563 424 aa8.06□□□□□ -1.12
CDC42SE2-205ENST00000502840 POTEFA5A3E0 1075 aa8.05□□□□□ -1.12
CDC42SE2-205ENST00000502840 TMEM121BQ9BXQ6 578 aaPredicted RBP8.04□□□□□ -1.12
CDC42SE2-205ENST00000502840 GSE1Q14687 1217 aa8.03□□□□□ -1.12
CDC42SE2-205ENST00000502840 SGIP1Q9BQI5 828 aa8.02□□□□□ -1.13
CDC42SE2-205ENST00000502840 ATN1P54259 1190 aaPredicted RBP8.01□□□□□ -1.13
CDC42SE2-205ENST00000502840 TRPC6Q9Y210 931 aa8.01□□□□□ -1.13
CDC42SE2-205ENST00000502840 PYGBP11216 843 aa8□□□□□ -1.13
CDC42SE2-205ENST00000502840 PCDHB13Q9Y5F0 798 aa8□□□□□ -1.13
CDC42SE2-205ENST00000502840 IFNL1Q8IU54 200 aa7.98□□□□□ -1.13
CDC42SE2-205ENST00000502840 TIE1P35590 1138 aa7.96□□□□□ -1.14
CDC42SE2-205ENST00000502840 BMP2KQ9NSY1 1161 aaPredicted RBP7.96□□□□□ -1.14
CDC42SE2-205ENST00000502840 CIZ1Q9ULV3 898 aaPredicted RBP7.96□□□□□ -1.14
CDC42SE2-205ENST00000502840 CHRM1P11229 460 aaPredicted RBP7.95□□□□□ -1.14
CDC42SE2-205ENST00000502840 SLAIN1Q8ND83 568 aa7.94□□□□□ -1.14
CDC42SE2-205ENST00000502840 TTLL13PA6NNM8 815 aa7.92□□□□□ -1.14
CDC42SE2-205ENST00000502840 PCDHB8Q9UN66 801 aa7.92□□□□□ -1.14
CDC42SE2-205ENST00000502840 ZNF467Q7Z7K2 595 aaPredicted RBP7.89□□□□□ -1.15
CDC42SE2-205ENST00000502840 TRIM41Q8WV44 630 aa7.89□□□□□ -1.15
CDC42SE2-205ENST00000502840 SEC24BO95487 1268 aa7.88□□□□□ -1.15
CDC42SE2-205ENST00000502840 TMEM106CQ9BVX2 250 aa7.87□□□□□ -1.15
CDC42SE2-205ENST00000502840 TRIM35Q9UPQ4 493 aa7.87□□□□□ -1.15
CDC42SE2-205ENST00000502840 COLQQ9Y215 455 aaPredicted RBP7.87□□□□□ -1.15
CDC42SE2-205ENST00000502840 SNPHO15079 494 aa7.85□□□□□ -1.15
CDC42SE2-205ENST00000502840 KRTAP3-3Q9BYR6 98 aa7.85□□□□□ -1.15
CDC42SE2-205ENST00000502840 KRTAP3-2Q9BYR7 98 aa7.85□□□□□ -1.15
CDC42SE2-205ENST00000502840 MARVELD3Q96A59 401 aa7.83□□□□□ -1.16
CDC42SE2-205ENST00000502840 RNF25Q96BH1 459 aaPredicted RBP7.83□□□□□ -1.16
CDC42SE2-205ENST00000502840 PSEN1P49768 467 aa7.82□□□□□ -1.16
CDC42SE2-205ENST00000502840 PDAP1Q13442 181 aaKnown RBP7.81□□□□□ -1.16
CDC42SE2-205ENST00000502840 PKD2Q13563 968 aa7.81□□□□□ -1.16
CDC42SE2-205ENST00000502840 IER5LQ5T953 404 aa7.81□□□□□ -1.16
CDC42SE2-205ENST00000502840 RIOK3O14730 519 aaKnown RBP7.77□□□□□ -1.17
CDC42SE2-205ENST00000502840 ECM2O94769 699 aaPredicted RBP7.77□□□□□ -1.17
CDC42SE2-205ENST00000502840 IRX5P78411 483 aaPredicted RBP7.76□□□□□ -1.17
CDC42SE2-205ENST00000502840 VGFO15240 615 aaPredicted RBP7.73□□□□□ -1.17
CDC42SE2-205ENST00000502840 EMP3P54852 163 aa7.73□□□□□ -1.17
CDC42SE2-205ENST00000502840 RNF166Q96A37 237 aaPredicted RBP7.73□□□□□ -1.17
CDC42SE2-205ENST00000502840 CABP2Q9NPB3 220 aa7.73□□□□□ -1.17
CDC42SE2-205ENST00000502840 RTN4Q9NQC3 1192 aaKnown RBP7.73□□□□□ -1.17
CDC42SE2-205ENST00000502840 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.72□□□□□ -1.17
CDC42SE2-205ENST00000502840 RGL2O15211 777 aa7.72□□□□□ -1.17
CDC42SE2-205ENST00000502840 ZFP91Q96JP5 570 aaPredicted RBP7.72□□□□□ -1.17
CDC42SE2-205ENST00000502840 HS3ST6Q96QI5 342 aa7.72□□□□□ -1.17
CDC42SE2-205ENST00000502840 PLCG2P16885 1265 aa7.71□□□□□ -1.18
CDC42SE2-205ENST00000502840 GOLGA2Q08379 1002 aa7.71□□□□□ -1.18
CDC42SE2-205ENST00000502840 MKRN3Q13064 507 aaKnown RBP7.71□□□□□ -1.18
CDC42SE2-205ENST00000502840 OCEL1Q9H607 264 aa7.71□□□□□ -1.18
CDC42SE2-205ENST00000502840 POTEB3A0JP26 581 aa7.69□□□□□ -1.18
CDC42SE2-205ENST00000502840 POTEBQ6S5H4 581 aa7.69□□□□□ -1.18
CDC42SE2-205ENST00000502840 ILDR1Q86SU0 546 aaPredicted RBP7.69□□□□□ -1.18
CDC42SE2-205ENST00000502840 PDCD7Q8N8D1 485 aaKnown RBP7.69□□□□□ -1.18
CDC42SE2-205ENST00000502840 EFCAB3Q8N7B9 438 aa7.67□□□□□ -1.18
CDC42SE2-205ENST00000502840 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.67□□□□□ -1.183e-12■□□□□ 8.9
CDC42SE2-205ENST00000502840 TAOK2Q9UL54 1235 aa7.67□□□□□ -1.18
CDC42SE2-205ENST00000502840 BCL11BQ9C0K0 894 aaPredicted RBP7.65□□□□□ -1.18
CDC42SE2-205ENST00000502840 FAM205CA6NFA0 338 aa7.64□□□□□ -1.19
CDC42SE2-205ENST00000502840 AMER1Q5JTC6 1135 aaPredicted RBP7.64□□□□□ -1.19
CDC42SE2-205ENST00000502840 STK24Q9Y6E0 443 aa7.63□□□□□ -1.19
CDC42SE2-205ENST00000502840 STK25O00506 426 aa7.62□□□□□ -1.19
CDC42SE2-205ENST00000502840 DPY19L2Q6NUT2 758 aa7.61□□□□□ -1.19
CDC42SE2-205ENST00000502840 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.61□□□□□ -1.19
CDC42SE2-205ENST00000502840 SOX12O15370 315 aa7.6□□□□□ -1.19
CDC42SE2-205ENST00000502840 MYT1LQ9UL68 1186 aa7.59□□□□□ -1.19
CDC42SE2-205ENST00000502840 PHF8Q9UPP1 1060 aa7.59□□□□□ -1.19
CDC42SE2-205ENST00000502840 L3MBTL3Q96JM7 780 aaPredicted RBP7.58□□□□□ -1.2
CDC42SE2-205ENST00000502840 MS4A4AQ96JQ5 239 aa7.58□□□□□ -1.2
CDC42SE2-205ENST00000502840 HS6ST3Q8IZP7 471 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms