RNA–Protein interactions for RNA: ENST00000502705.5

PTPN20-213, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-213ENST00000502705 POTEB2H3BUK9 544 aa10.53□□□□□ -0.72
PTPN20-213ENST00000502705 C7P10643 843 aa10.53□□□□□ -0.72
PTPN20-213ENST00000502705 ASTLQ6HA08 431 aaPredicted RBP10.52□□□□□ -0.73
PTPN20-213ENST00000502705 SLC39A7Q92504 469 aa10.52□□□□□ -0.73
PTPN20-213ENST00000502705 ATMINO43313 823 aaPredicted RBP10.51□□□□□ -0.73
PTPN20-213ENST00000502705 METRNQ9UJH8 293 aa10.49□□□□□ -0.73
PTPN20-213ENST00000502705 CCDC61Q9Y6R9 512 aa10.48□□□□□ -0.73
PTPN20-213ENST00000502705 PLSCR2Q9NRY7 297 aa10.47□□□□□ -0.73
PTPN20-213ENST00000502705 MAMSTRQ6ZN01 415 aa10.46□□□□□ -0.73
PTPN20-213ENST00000502705 KIF12Q96FN5 646 aa10.45□□□□□ -0.74
PTPN20-213ENST00000502705 PLCD3Q8N3E9 789 aa10.44□□□□□ -0.74
PTPN20-213ENST00000502705 ATN1P54259 1190 aaPredicted RBP10.41□□□□□ -0.74
PTPN20-213ENST00000502705 MAP3K13O43283 966 aa10.39□□□□□ -0.75
PTPN20-213ENST00000502705 ZBTB47Q9UFB7 747 aaPredicted RBP10.38□□□□□ -0.75
PTPN20-213ENST00000502705 POTEMA6NI47 508 aa10.37□□□□□ -0.75
PTPN20-213ENST00000502705 RASEFQ8IZ41 740 aa10.37□□□□□ -0.75
PTPN20-213ENST00000502705 SCUBE2Q9NQ36 999 aa10.37□□□□□ -0.75
PTPN20-213ENST00000502705 TIE1P35590 1138 aa10.36□□□□□ -0.75
PTPN20-213ENST00000502705 BMP2KQ9NSY1 1161 aaPredicted RBP10.35□□□□□ -0.75
PTPN20-213ENST00000502705 POTEJP0CG39 1038 aa10.33□□□□□ -0.76
PTPN20-213ENST00000502705 POTEGQ6S5H5 508 aa10.33□□□□□ -0.76
PTPN20-213ENST00000502705 SEC24BO95487 1268 aa10.31□□□□□ -0.76
PTPN20-213ENST00000502705 SGIP1Q9BQI5 828 aa10.31□□□□□ -0.76
PTPN20-213ENST00000502705 PCDH10Q9P2E7 1040 aa10.3□□□□□ -0.76
PTPN20-213ENST00000502705 TRPC6Q9Y210 931 aa10.3□□□□□ -0.76
PTPN20-213ENST00000502705 FAM163AQ96GL9 167 aaPredicted RBP10.29□□□□□ -0.76
PTPN20-213ENST00000502705 PCDHB13Q9Y5F0 798 aa10.29□□□□□ -0.76
PTPN20-213ENST00000502705 TTLL13PA6NNM8 815 aa10.26□□□□□ -0.77
PTPN20-213ENST00000502705 NUBP1P53384 320 aa10.25□□□□□ -0.77
PTPN20-213ENST00000502705 POTEFA5A3E0 1075 aa10.24□□□□□ -0.77
PTPN20-213ENST00000502705 FKBP8Q14318 412 aa10.24□□□□□ -0.77
PTPN20-213ENST00000502705 FAM212AQ96EL1 285 aa10.24□□□□□ -0.77
PTPN20-213ENST00000502705 IER5LQ5T953 404 aa10.22□□□□□ -0.77
PTPN20-213ENST00000502705 TRIM35Q9UPQ4 493 aa10.22□□□□□ -0.77
PTPN20-213ENST00000502705 COLQQ9Y215 455 aaPredicted RBP10.2□□□□□ -0.78
PTPN20-213ENST00000502705 DCAF8Q5TAQ9 597 aa10.19□□□□□ -0.78
PTPN20-213ENST00000502705 IFNL1Q8IU54 200 aa10.18□□□□□ -0.78
PTPN20-213ENST00000502705 TMEM106CQ9BVX2 250 aa10.17□□□□□ -0.78
PTPN20-213ENST00000502705 FBXO3Q9UK99 471 aa10.16□□□□□ -0.78
PTPN20-213ENST00000502705 PLCG2P16885 1265 aa10.13□□□□□ -0.79
PTPN20-213ENST00000502705 LCE2DQ5TA82 110 aaPredicted RBP10.11□□□□□ -0.79
PTPN20-213ENST00000502705 SLAIN1Q8ND83 568 aa10.1□□□□□ -0.79
PTPN20-213ENST00000502705 PYGBP11216 843 aa10.08□□□□□ -0.8
PTPN20-213ENST00000502705 KLHL34Q8N239 644 aa10.07□□□□□ -0.8
PTPN20-213ENST00000502705 OCEL1Q9H607 264 aa10.06□□□□□ -0.8
PTPN20-213ENST00000502705 IRX5P78411 483 aaPredicted RBP10.03□□□□□ -0.8
PTPN20-213ENST00000502705 GSE1Q14687 1217 aa10.02□□□□□ -0.81
PTPN20-213ENST00000502705 PCDHB8Q9UN66 801 aa10.02□□□□□ -0.81
PTPN20-213ENST00000502705 CDAN1Q8IWY9 1227 aa10.01□□□□□ -0.81
PTPN20-213ENST00000502705 SNPHO15079 494 aa9.98□□□□□ -0.81
PTPN20-213ENST00000502705 ST18O60284 1047 aa9.98□□□□□ -0.81
PTPN20-213ENST00000502705 GOLGA2Q08379 1002 aa9.98□□□□□ -0.81
PTPN20-213ENST00000502705 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.98□□□□□ -0.81
PTPN20-213ENST00000502705 ZNF467Q7Z7K2 595 aaPredicted RBP9.97□□□□□ -0.81
PTPN20-213ENST00000502705 VASPP50552 380 aaPredicted RBP9.95□□□□□ -0.82
PTPN20-213ENST00000502705 MKRN3Q13064 507 aaKnown RBP9.95□□□□□ -0.82
PTPN20-213ENST00000502705 CHRM1P11229 460 aaPredicted RBP9.92□□□□□ -0.82
PTPN20-213ENST00000502705 L3MBTL3Q96JM7 780 aaPredicted RBP9.92□□□□□ -0.82
PTPN20-213ENST00000502705 TMEM121BQ9BXQ6 578 aaPredicted RBP9.9□□□□□ -0.82
PTPN20-213ENST00000502705 PSEN1P49768 467 aa9.87□□□□□ -0.83
PTPN20-213ENST00000502705 C3orf67Q6ZVT6 689 aa9.87□□□□□ -0.83
PTPN20-213ENST00000502705 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.86□□□□□ -0.83
PTPN20-213ENST00000502705 PDCD7Q8N8D1 485 aaKnown RBP9.82□□□□□ -0.84
PTPN20-213ENST00000502705 SPOCK2Q92563 424 aa9.82□□□□□ -0.84
PTPN20-213ENST00000502705 CIZ1Q9ULV3 898 aaPredicted RBP9.82□□□□□ -0.84
PTPN20-213ENST00000502705 PDAP1Q13442 181 aaKnown RBP9.81□□□□□ -0.84
PTPN20-213ENST00000502705 G3V3G9 751 aa9.8□□□□□ -0.84
PTPN20-213ENST00000502705 MARVELD3Q96A59 401 aa9.8□□□□□ -0.84
PTPN20-213ENST00000502705 SPNS2Q8IVW8 549 aa9.75□□□□□ -0.85
PTPN20-213ENST00000502705 EMP3P54852 163 aa9.74□□□□□ -0.85
PTPN20-213ENST00000502705 IFNLR1Q8IU57 520 aaPredicted RBP9.74□□□□□ -0.85
PTPN20-213ENST00000502705 CABP2Q9NPB3 220 aa9.74□□□□□ -0.85
PTPN20-213ENST00000502705 MMRN1Q13201 1228 aa9.72□□□□□ -0.85
PTPN20-213ENST00000502705 DPY19L2Q6NUT2 758 aa9.71□□□□□ -0.86
PTPN20-213ENST00000502705 ILDR1Q86SU0 546 aaPredicted RBP9.7□□□□□ -0.86
PTPN20-213ENST00000502705 BOLA1Q9Y3E2 137 aa9.7□□□□□ -0.86
PTPN20-213ENST00000502705 FAM205CA6NFA0 338 aa9.68□□□□□ -0.86
PTPN20-213ENST00000502705 TRIM41Q8WV44 630 aa9.68□□□□□ -0.86
PTPN20-213ENST00000502705 HS3ST6Q96QI5 342 aa9.66□□□□□ -0.86
PTPN20-213ENST00000502705 ZNF710Q8N1W2 664 aa9.65□□□□□ -0.86
PTPN20-213ENST00000502705 DOK7Q18PE1 504 aa9.61□□□□□ -0.87
PTPN20-213ENST00000502705 EFCAB3Q8N7B9 438 aa9.6□□□□□ -0.87
PTPN20-213ENST00000502705 POTEB3A0JP26 581 aa9.59□□□□□ -0.87
PTPN20-213ENST00000502705 POTEBQ6S5H4 581 aa9.59□□□□□ -0.87
PTPN20-213ENST00000502705 RIMBP2O15034 1052 aa9.58□□□□□ -0.88
PTPN20-213ENST00000502705 HOXB3P14651 431 aaPredicted RBP9.57□□□□□ -0.88
PTPN20-213ENST00000502705 HOXB1P14653 301 aaPredicted RBP9.57□□□□□ -0.88
PTPN20-213ENST00000502705 ERBB3P21860 1342 aa9.56□□□□□ -0.88
PTPN20-213ENST00000502705 KRTAP3-3Q9BYR6 98 aa9.56□□□□□ -0.88
PTPN20-213ENST00000502705 KRTAP3-2Q9BYR7 98 aa9.56□□□□□ -0.88
PTPN20-213ENST00000502705 SOX12O15370 315 aa9.55□□□□□ -0.88
PTPN20-213ENST00000502705 RIOK3O14730 519 aaKnown RBP9.51□□□□□ -0.89
PTPN20-213ENST00000502705 VGFO15240 615 aaPredicted RBP9.49□□□□□ -0.89
PTPN20-213ENST00000502705 MICALL2Q8IY33 904 aa9.49□□□□□ -0.89
PTPN20-213ENST00000502705 ZSWIM6Q9HCJ5 1215 aa9.48□□□□□ -0.89
PTPN20-213ENST00000502705 CCDC180Q9P1Z9 1646 aa9.47□□□□□ -0.89
PTPN20-213ENST00000502705 TAOK2Q9UL54 1235 aa9.47□□□□□ -0.89
PTPN20-213ENST00000502705 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.46□□□□□ -0.9
PTPN20-213ENST00000502705 ZFP91Q96JP5 570 aaPredicted RBP9.46□□□□□ -0.9
PTPN20-213ENST00000502705 VARS2Q5ST30 1063 aaKnown RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms