RNA–Protein interactions for RNA: ENST00000502575.1

PDE4D-209, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-209ENST00000502575 PRKAR2AP13861 404 aaKnown RBP16.68■□□□□ 0.26
PDE4D-209ENST00000502575 THOC2Q8NI27 1593 aaKnown RBP16.67■□□□□ 0.26
PDE4D-209ENST00000502575 LAMC3Q9Y6N6 1575 aa16.67■□□□□ 0.26
PDE4D-209ENST00000502575 CUX2O14529 1486 aa16.66■□□□□ 0.26
PDE4D-209ENST00000502575 HAX1O00165 279 aa16.56■□□□□ 0.24
PDE4D-209ENST00000502575 PROM2Q8N271 834 aa16.51■□□□□ 0.23
PDE4D-209ENST00000502575 RSF1Q96T23 1441 aaPredicted RBP16.51■□□□□ 0.23
PDE4D-209ENST00000502575 SP7Q8TDD2 431 aaPredicted RBP16.5■□□□□ 0.23
PDE4D-209ENST00000502575 PRDM2Q13029 1718 aa16.49■□□□□ 0.23
PDE4D-209ENST00000502575 TOP2AP11388 1531 aaKnown RBP16.49■□□□□ 0.23
PDE4D-209ENST00000502575 CHADLQ6NUI6 762 aa16.45■□□□□ 0.22
PDE4D-209ENST00000502575 PDS5BQ9NTI5 1447 aa16.45■□□□□ 0.22
PDE4D-209ENST00000502575 CADPSQ9ULU8 1353 aa16.44■□□□□ 0.22
PDE4D-209ENST00000502575 DNAJC5Q9H3Z4 198 aa16.42■□□□□ 0.22
PDE4D-209ENST00000502575 C19orf67A6NJJ6 358 aa16.39■□□□□ 0.21
PDE4D-209ENST00000502575 WDR62O43379 1518 aa16.39■□□□□ 0.21
PDE4D-209ENST00000502575 MRC2Q9UBG0 1479 aa16.38■□□□□ 0.21
PDE4D-209ENST00000502575 FARP1Q9Y4F1 1045 aaPredicted RBP16.37■□□□□ 0.21
PDE4D-209ENST00000502575 CEP164Q9UPV0 1460 aa16.35■□□□□ 0.21
PDE4D-209ENST00000502575 CFTRP13569 1480 aa16.33■□□□□ 0.2
PDE4D-209ENST00000502575 FANCD2Q9BXW9 1451 aa16.33■□□□□ 0.2
PDE4D-209ENST00000502575 CREBZFQ9NS37 354 aa16.32■□□□□ 0.2
PDE4D-209ENST00000502575 CCDC88BA6NC98 1476 aa16.25■□□□□ 0.19
PDE4D-209ENST00000502575 URB2Q14146 1524 aaKnown RBP16.24■□□□□ 0.19
PDE4D-209ENST00000502575 EVX2Q03828 476 aa16.23■□□□□ 0.19
PDE4D-209ENST00000502575 FKBP8Q14318 412 aa16.23■□□□□ 0.19
PDE4D-209ENST00000502575 NPM1P06748 294 aaKnown RBP eCLIP16.18■□□□□ 0.18
PDE4D-209ENST00000502575 CD44P16070 742 aaKnown RBP16.18■□□□□ 0.18
PDE4D-209ENST00000502575 CLCN6P51797 869 aa16.18■□□□□ 0.18
PDE4D-209ENST00000502575 PLEKHG5O94827 1062 aa16.13■□□□□ 0.17
PDE4D-209ENST00000502575 MNX1P50219 401 aaPredicted RBP16.08■□□□□ 0.16
PDE4D-209ENST00000502575 TOPBP1Q92547 1522 aa16.06■□□□□ 0.16
PDE4D-209ENST00000502575 PAK3O75914 559 aaPredicted RBP16.06■□□□□ 0.16
PDE4D-209ENST00000502575 DNMBPQ6XZF7 1577 aa16.04■□□□□ 0.16
PDE4D-209ENST00000502575 GABBR2O75899 941 aa16.03■□□□□ 0.16
PDE4D-209ENST00000502575 EIF4G3O43432 1585 aaKnown RBP16.01■□□□□ 0.15
PDE4D-209ENST00000502575 ZNF579Q8NAF0 562 aaKnown RBP16.01■□□□□ 0.15
PDE4D-209ENST00000502575 FBXO3Q9UK99 471 aa16.01■□□□□ 0.15
PDE4D-209ENST00000502575 ZNF608Q9ULD9 1512 aaPredicted RBP16■□□□□ 0.15
PDE4D-209ENST00000502575 TARBP1Q13395 1621 aaKnown RBP16■□□□□ 0.15
PDE4D-209ENST00000502575 MIER1Q8N108 512 aa15.99■□□□□ 0.15
PDE4D-209ENST00000502575 ZRANB1Q9UGI0 708 aa15.99■□□□□ 0.15
PDE4D-209ENST00000502575 IFT140Q96RY7 1462 aa15.97■□□□□ 0.15
PDE4D-209ENST00000502575 CHD1O14646 1710 aa15.97■□□□□ 0.15
PDE4D-209ENST00000502575 ZBTB47Q9UFB7 747 aaPredicted RBP15.96■□□□□ 0.15
PDE4D-209ENST00000502575 ABCC8Q09428 1581 aa15.95■□□□□ 0.14
PDE4D-209ENST00000502575 PLCD3Q8N3E9 789 aa15.93■□□□□ 0.14
PDE4D-209ENST00000502575 POLA1P09884 1462 aaPredicted RBP15.91■□□□□ 0.14
PDE4D-209ENST00000502575 WDR97A6NE52 1622 aa15.88■□□□□ 0.13
PDE4D-209ENST00000502575 CUX1P39880 1505 aa15.87■□□□□ 0.13
PDE4D-209ENST00000502575 RAD54L2Q9Y4B4 1467 aa15.84■□□□□ 0.13
PDE4D-209ENST00000502575 RIMBP3CA6NJZ7 1639 aa15.84■□□□□ 0.13
PDE4D-209ENST00000502575 RIMBP3BA6NNM3 1639 aa15.84■□□□□ 0.13
PDE4D-209ENST00000502575 RIMBP3Q9UFD9 1639 aa15.84■□□□□ 0.13
PDE4D-209ENST00000502575 AQRO60306 1485 aaKnown RBP eCLIP15.84■□□□□ 0.13
PDE4D-209ENST00000502575 FGD5Q6ZNL6 1462 aa15.83■□□□□ 0.12
PDE4D-209ENST00000502575 SUPT5HO00267 1087 aaKnown RBP15.82■□□□□ 0.12
PDE4D-209ENST00000502575 PBRM1Q86U86 1689 aa15.82■□□□□ 0.12
PDE4D-209ENST00000502575 TRIM41Q8WV44 630 aa15.81■□□□□ 0.12
PDE4D-209ENST00000502575 SOGA1O94964 1423 aa15.76■□□□□ 0.11
PDE4D-209ENST00000502575 ARHGEF11O15085 1522 aa15.73■□□□□ 0.11
PDE4D-209ENST00000502575 BIVM-ERCC5R4GMW8 1640 aa15.72■□□□□ 0.11
PDE4D-209ENST00000502575 DCBLD2Q96PD2 775 aa15.72■□□□□ 0.11
PDE4D-209ENST00000502575 PHF12Q96QT6 1004 aa15.72■□□□□ 0.11
PDE4D-209ENST00000502575 TDRD9Q8NDG6 1382 aaKnown RBP15.72■□□□□ 0.11
PDE4D-209ENST00000502575 TSPYL2Q9H2G4 693 aaPredicted RBP15.71■□□□□ 0.11
PDE4D-209ENST00000502575 ABCA5Q8WWZ7 1642 aa15.71■□□□□ 0.11
PDE4D-209ENST00000502575 SNAPC4Q5SXM2 1469 aa15.71■□□□□ 0.1
PDE4D-209ENST00000502575 CCDC61Q9Y6R9 512 aa15.7■□□□□ 0.1
PDE4D-209ENST00000502575 SYNJ1O43426 1573 aa15.69■□□□□ 0.1
PDE4D-209ENST00000502575 VASPP50552 380 aaPredicted RBP15.68■□□□□ 0.1
PDE4D-209ENST00000502575 TOP2BQ02880 1626 aa15.66■□□□□ 0.1
PDE4D-209ENST00000502575 GALR2O43603 387 aaPredicted RBP15.66■□□□□ 0.1
PDE4D-209ENST00000502575 RASEFQ8IZ41 740 aa15.66■□□□□ 0.1
PDE4D-209ENST00000502575 CLASP1Q7Z460 1538 aa15.64■□□□□ 0.09
PDE4D-209ENST00000502575 NUBP1P53384 320 aa15.64■□□□□ 0.09
PDE4D-209ENST00000502575 GRIN2BQ13224 1484 aa15.63■□□□□ 0.09
PDE4D-209ENST00000502575 MAGI1Q96QZ7 1491 aaPredicted RBP15.63■□□□□ 0.09
PDE4D-209ENST00000502575 FAM212AQ96EL1 285 aa15.62■□□□□ 0.09
PDE4D-209ENST00000502575 ABCA10Q8WWZ4 1543 aa15.62■□□□□ 0.09
PDE4D-209ENST00000502575 GAPVD1Q14C86 1478 aa15.61■□□□□ 0.09
PDE4D-209ENST00000502575 POTEIP0CG38 1075 aa15.61■□□□□ 0.09
PDE4D-209ENST00000502575 KIF12Q96FN5 646 aa15.58■□□□□ 0.08
PDE4D-209ENST00000502575 SYNJ2O15056 1496 aa15.58■□□□□ 0.08
PDE4D-209ENST00000502575 ARAP1Q96P48 1450 aa15.58■□□□□ 0.08
PDE4D-209ENST00000502575 ADAMTS12P58397 1594 aa15.57■□□□□ 0.08
PDE4D-209ENST00000502575 MS4A3Q96HJ5 214 aa15.56■□□□□ 0.08
PDE4D-209ENST00000502575 WRNQ14191 1432 aaPredicted RBP eCLIP15.56■□□□□ 0.08
PDE4D-209ENST00000502575 SGIP1Q9BQI5 828 aa15.55■□□□□ 0.08
PDE4D-209ENST00000502575 KLHL34Q8N239 644 aa15.52■□□□□ 0.08
PDE4D-209ENST00000502575 CHMP7Q8WUX9 453 aaPredicted RBP15.5■□□□□ 0.07
PDE4D-209ENST00000502575 CEP170Q5SW79 1584 aa15.49■□□□□ 0.07
PDE4D-209ENST00000502575 CYB5RLQ6IPT4 315 aa15.48■□□□□ 0.07
PDE4D-209ENST00000502575 GRIN2AQ12879 1464 aa15.47■□□□□ 0.07
PDE4D-209ENST00000502575 ASTLQ6HA08 431 aaPredicted RBP15.47■□□□□ 0.07
PDE4D-209ENST00000502575 MAP3K13O43283 966 aa15.46■□□□□ 0.07
PDE4D-209ENST00000502575 ERCC6L2Q5T890 1561 aa15.45■□□□□ 0.06
PDE4D-209ENST00000502575 LHX8Q68G74 356 aa15.45■□□□□ 0.06
PDE4D-209ENST00000502575 ERICH3Q5RHP9 1530 aa15.44■□□□□ 0.06
PDE4D-209ENST00000502575 GSE1Q14687 1217 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms