RNA–Protein interactions for RNA: ENST00000499038.2

UBE2B-202, Transcript of ubiquitin conjugating enzyme E2 B, humanhuman

TSL 3

Gene UBE2B, Length 682 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2B-202ENST00000499038 NUBP1P53384 320 aa13.66□□□□□ -0.22
UBE2B-202ENST00000499038 CCDC61Q9Y6R9 512 aa13.66□□□□□ -0.22
UBE2B-202ENST00000499038 GALR2O43603 387 aaPredicted RBP13.64□□□□□ -0.23
UBE2B-202ENST00000499038 FAM212AQ96EL1 285 aa13.64□□□□□ -0.23
UBE2B-202ENST00000499038 DCBLD2Q96PD2 775 aa13.62□□□□□ -0.23
UBE2B-202ENST00000499038 MS4A3Q96HJ5 214 aa13.57□□□□□ -0.24
UBE2B-202ENST00000499038 DCAF8Q5TAQ9 597 aa13.56□□□□□ -0.24
UBE2B-202ENST00000499038 KIF12Q96FN5 646 aa13.55□□□□□ -0.24
UBE2B-202ENST00000499038 IFNLR1Q8IU57 520 aaPredicted RBP13.54□□□□□ -0.24
UBE2B-202ENST00000499038 POTEIP0CG38 1075 aa13.53□□□□□ -0.24
UBE2B-202ENST00000499038 MAP3K13O43283 966 aa13.5□□□□□ -0.25
UBE2B-202ENST00000499038 SPOCK2Q92563 424 aa13.5□□□□□ -0.25
UBE2B-202ENST00000499038 GSE1Q14687 1217 aa13.47□□□□□ -0.25
UBE2B-202ENST00000499038 PCDHB13Q9Y5F0 798 aa13.45□□□□□ -0.26
UBE2B-202ENST00000499038 PYGBP11216 843 aa13.42□□□□□ -0.26
UBE2B-202ENST00000499038 SGIP1Q9BQI5 828 aa13.42□□□□□ -0.26
UBE2B-202ENST00000499038 CIZ1Q9ULV3 898 aaPredicted RBP13.39□□□□□ -0.27
UBE2B-202ENST00000499038 ATMINO43313 823 aaPredicted RBP13.36□□□□□ -0.27
UBE2B-202ENST00000499038 ASTLQ6HA08 431 aaPredicted RBP13.36□□□□□ -0.27
UBE2B-202ENST00000499038 IFNL1Q8IU54 200 aa13.35□□□□□ -0.27
UBE2B-202ENST00000499038 PLSCR2Q9NRY7 297 aa13.35□□□□□ -0.27
UBE2B-202ENST00000499038 TRPC6Q9Y210 931 aa13.35□□□□□ -0.27
UBE2B-202ENST00000499038 TIE1P35590 1138 aa13.34□□□□□ -0.27
UBE2B-202ENST00000499038 BMP2KQ9NSY1 1161 aaPredicted RBP13.33□□□□□ -0.28
UBE2B-202ENST00000499038 PELP1Q8IZL8 1130 aaKnown RBP13.31□□□□□ -0.28
UBE2B-202ENST00000499038 ATN1P54259 1190 aaPredicted RBP13.3□□□□□ -0.28
UBE2B-202ENST00000499038 SLC39A7Q92504 469 aa13.28□□□□□ -0.28
UBE2B-202ENST00000499038 TTLL13PA6NNM8 815 aa13.27□□□□□ -0.29
UBE2B-202ENST00000499038 PCDHB8Q9UN66 801 aa13.26□□□□□ -0.29
UBE2B-202ENST00000499038 CHRM1P11229 460 aaPredicted RBP13.25□□□□□ -0.29
UBE2B-202ENST00000499038 ZNF467Q7Z7K2 595 aaPredicted RBP13.25□□□□□ -0.29
UBE2B-202ENST00000499038 METRNQ9UJH8 293 aa13.25□□□□□ -0.29
UBE2B-202ENST00000499038 C7P10643 843 aa13.24□□□□□ -0.29
UBE2B-202ENST00000499038 TMEM106CQ9BVX2 250 aa13.24□□□□□ -0.29
UBE2B-202ENST00000499038 TRIM41Q8WV44 630 aa13.2□□□□□ -0.3
UBE2B-202ENST00000499038 TRIM35Q9UPQ4 493 aa13.2□□□□□ -0.3
UBE2B-202ENST00000499038 SEC24BO95487 1268 aa13.13□□□□□ -0.31
UBE2B-202ENST00000499038 IER5LQ5T953 404 aa13.12□□□□□ -0.31
UBE2B-202ENST00000499038 PSEN1P49768 467 aa13.1□□□□□ -0.31
UBE2B-202ENST00000499038 POTEB2H3BUK9 544 aa13.09□□□□□ -0.31
UBE2B-202ENST00000499038 PDAP1Q13442 181 aaKnown RBP13.09□□□□□ -0.31
UBE2B-202ENST00000499038 GOLGA2Q08379 1002 aa13.07□□□□□ -0.32
UBE2B-202ENST00000499038 COLQQ9Y215 455 aaPredicted RBP13.04□□□□□ -0.32
UBE2B-202ENST00000499038 POTEFA5A3E0 1075 aa13.03□□□□□ -0.32
UBE2B-202ENST00000499038 PLCG2P16885 1265 aa13.03□□□□□ -0.32
UBE2B-202ENST00000499038 OTUD5Q96G74 571 aa13.03□□□□□ -0.32
UBE2B-202ENST00000499038 MKRN3Q13064 507 aaKnown RBP13.01□□□□□ -0.33
UBE2B-202ENST00000499038 RIOK3O14730 519 aaKnown RBP13□□□□□ -0.33
UBE2B-202ENST00000499038 ECM2O94769 699 aaPredicted RBP12.98□□□□□ -0.33
UBE2B-202ENST00000499038 MAMSTRQ6ZN01 415 aa12.98□□□□□ -0.33
UBE2B-202ENST00000499038 IRX5P78411 483 aaPredicted RBP12.97□□□□□ -0.33
UBE2B-202ENST00000499038 RNF25Q96BH1 459 aaPredicted RBP12.96□□□□□ -0.33
UBE2B-202ENST00000499038 CABP2Q9NPB3 220 aa12.96□□□□□ -0.33
UBE2B-202ENST00000499038 SCUBE2Q9NQ36 999 aa12.96□□□□□ -0.33
UBE2B-202ENST00000499038 POTEJP0CG39 1038 aa12.95□□□□□ -0.34
UBE2B-202ENST00000499038 OCEL1Q9H607 264 aa12.95□□□□□ -0.34
UBE2B-202ENST00000499038 POTEMA6NI47 508 aa12.93□□□□□ -0.34
UBE2B-202ENST00000499038 VGFO15240 615 aaPredicted RBP12.93□□□□□ -0.34
UBE2B-202ENST00000499038 PKD2Q13563 968 aa12.92□□□□□ -0.34
UBE2B-202ENST00000499038 TAOK2Q9UL54 1235 aa12.91□□□□□ -0.34
UBE2B-202ENST00000499038 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.9□□□□□ -0.34
UBE2B-202ENST00000499038 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.88□□□□□ -0.35
UBE2B-202ENST00000499038 ZFP91Q96JP5 570 aaPredicted RBP12.88□□□□□ -0.35
UBE2B-202ENST00000499038 POTEGQ6S5H5 508 aa12.87□□□□□ -0.35
UBE2B-202ENST00000499038 RGL2O15211 777 aa12.83□□□□□ -0.36
UBE2B-202ENST00000499038 PDCD7Q8N8D1 485 aaKnown RBP12.83□□□□□ -0.36
UBE2B-202ENST00000499038 EFCAB3Q8N7B9 438 aa12.82□□□□□ -0.36
UBE2B-202ENST00000499038 L3MBTL3Q96JM7 780 aaPredicted RBP12.79□□□□□ -0.36
UBE2B-202ENST00000499038 BCL11BQ9C0K0 894 aaPredicted RBP12.79□□□□□ -0.36
UBE2B-202ENST00000499038 STK24Q9Y6E0 443 aa12.78□□□□□ -0.36
UBE2B-202ENST00000499038 STK25O00506 426 aa12.77□□□□□ -0.37
UBE2B-202ENST00000499038 G3V3G9 751 aa12.75□□□□□ -0.37
UBE2B-202ENST00000499038 ILDR1Q86SU0 546 aaPredicted RBP12.75□□□□□ -0.37
UBE2B-202ENST00000499038 SLAIN1Q8ND83 568 aa12.75□□□□□ -0.37
UBE2B-202ENST00000499038 C3orf67Q6ZVT6 689 aa12.74□□□□□ -0.37
UBE2B-202ENST00000499038 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.74□□□□□ -0.37
UBE2B-202ENST00000499038 SOX12O15370 315 aa12.73□□□□□ -0.37
UBE2B-202ENST00000499038 DPY19L2Q6NUT2 758 aa12.72□□□□□ -0.37
UBE2B-202ENST00000499038 PCDH10Q9P2E7 1040 aa12.69□□□□□ -0.38
UBE2B-202ENST00000499038 BOLA1Q9Y3E2 137 aa12.68□□□□□ -0.38
UBE2B-202ENST00000499038 PHF8Q9UPP1 1060 aa12.67□□□□□ -0.38
UBE2B-202ENST00000499038 NLRP6P59044 892 aa12.65□□□□□ -0.38
UBE2B-202ENST00000499038 LCE2DQ5TA82 110 aaPredicted RBP12.64□□□□□ -0.39
UBE2B-202ENST00000499038 FAM163AQ96GL9 167 aaPredicted RBP12.62□□□□□ -0.39
UBE2B-202ENST00000499038 MS4A4AQ96JQ5 239 aa12.6□□□□□ -0.39
UBE2B-202ENST00000499038 MFRPQ9BY79 579 aa12.58□□□□□ -0.4
UBE2B-202ENST00000499038 CHGAP10645 457 aaKnown RBP12.57□□□□□ -0.4
UBE2B-202ENST00000499038 HS6ST3Q8IZP7 471 aa12.57□□□□□ -0.4
UBE2B-202ENST00000499038 MICALL2Q8IY33 904 aa12.56□□□□□ -0.4
UBE2B-202ENST00000499038 FBXO22Q8NEZ5 403 aa12.56□□□□□ -0.4
UBE2B-202ENST00000499038 SNPHO15079 494 aa12.55□□□□□ -0.4
UBE2B-202ENST00000499038 TMEM121BQ9BXQ6 578 aaPredicted RBP12.55□□□□□ -0.4
UBE2B-202ENST00000499038 DCAF8L2P0C7V8 631 aa12.53□□□□□ -0.4
UBE2B-202ENST00000499038 ST18O60284 1047 aa12.47□□□□□ -0.41
UBE2B-202ENST00000499038 AMER1Q5JTC6 1135 aaPredicted RBP12.41□□□□□ -0.42
UBE2B-202ENST00000499038 TMEM92Q6UXU6 159 aa12.4□□□□□ -0.42
UBE2B-202ENST00000499038 DNAJC5Q9H3Z4 198 aa12.38□□□□□ -0.43
UBE2B-202ENST00000499038 PPP1R37O75864 691 aa12.37□□□□□ -0.43
UBE2B-202ENST00000499038 RYDENQ9NUL5 291 aaKnown RBP12.37□□□□□ -0.43
UBE2B-202ENST00000499038 DOK7Q18PE1 504 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms