RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 TSPYL2Q9H2G4 693 aaPredicted RBP13.28□□□□□ -0.28
SSR3-209ENST00000498205 CLCN6P51797 869 aa13.25□□□□□ -0.29
SSR3-209ENST00000498205 ZRANB1Q9UGI0 708 aa13.25□□□□□ -0.29
SSR3-209ENST00000498205 CCDC61Q9Y6R9 512 aa13.23□□□□□ -0.29
SSR3-209ENST00000498205 CHRM1P11229 460 aaPredicted RBP13.21□□□□□ -0.29
SSR3-209ENST00000498205 RTN4Q9NQC3 1192 aaKnown RBP13.21□□□□□ -0.29
SSR3-209ENST00000498205 PKD2Q13563 968 aa13.2□□□□□ -0.3
SSR3-209ENST00000498205 ZNF579Q8NAF0 562 aaKnown RBP13.2□□□□□ -0.3
SSR3-209ENST00000498205 ECM2O94769 699 aaPredicted RBP13.18□□□□□ -0.3
SSR3-209ENST00000498205 SGIP1Q9BQI5 828 aa13.17□□□□□ -0.3
SSR3-209ENST00000498205 PYGBP11216 843 aa13.12□□□□□ -0.31
SSR3-209ENST00000498205 TAOK2Q9UL54 1235 aa13.12□□□□□ -0.31
SSR3-209ENST00000498205 ZNF467Q7Z7K2 595 aaPredicted RBP13.09□□□□□ -0.31
SSR3-209ENST00000498205 KIF12Q96FN5 646 aa13.09□□□□□ -0.31
SSR3-209ENST00000498205 EVX2Q03828 476 aa13.06□□□□□ -0.32
SSR3-209ENST00000498205 PHF12Q96QT6 1004 aa13.05□□□□□ -0.32
SSR3-209ENST00000498205 PCDHB13Q9Y5F0 798 aa13.05□□□□□ -0.32
SSR3-209ENST00000498205 MAP3K13O43283 966 aa13.03□□□□□ -0.32
SSR3-209ENST00000498205 RIOK3O14730 519 aaKnown RBP13.01□□□□□ -0.33
SSR3-209ENST00000498205 SP7Q8TDD2 431 aaPredicted RBP13□□□□□ -0.33
SSR3-209ENST00000498205 RGL2O15211 777 aa12.97□□□□□ -0.33
SSR3-209ENST00000498205 VGFO15240 615 aaPredicted RBP12.97□□□□□ -0.33
SSR3-209ENST00000498205 IFNL1Q8IU54 200 aa12.95□□□□□ -0.34
SSR3-209ENST00000498205 RNF25Q96BH1 459 aaPredicted RBP12.94□□□□□ -0.34
SSR3-209ENST00000498205 MS4A3Q96HJ5 214 aa12.94□□□□□ -0.34
SSR3-209ENST00000498205 GABBR2O75899 941 aa12.93□□□□□ -0.34
SSR3-209ENST00000498205 PDAP1Q13442 181 aaKnown RBP12.92□□□□□ -0.34
SSR3-209ENST00000498205 PCDHB8Q9UN66 801 aa12.91□□□□□ -0.34
SSR3-209ENST00000498205 DCAF8L2P0C7V8 631 aa12.9□□□□□ -0.34
SSR3-209ENST00000498205 GALR2O43603 387 aaPredicted RBP12.89□□□□□ -0.35
SSR3-209ENST00000498205 TIE1P35590 1138 aa12.89□□□□□ -0.35
SSR3-209ENST00000498205 PSEN1P49768 467 aa12.85□□□□□ -0.35
SSR3-209ENST00000498205 DCBLD2Q96PD2 775 aa12.82□□□□□ -0.36
SSR3-209ENST00000498205 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.81□□□□□ -0.36
SSR3-209ENST00000498205 ZFP91Q96JP5 570 aaPredicted RBP12.81□□□□□ -0.36
SSR3-209ENST00000498205 HS6ST3Q8IZP7 471 aa12.8□□□□□ -0.36
SSR3-209ENST00000498205 STK25O00506 426 aa12.79□□□□□ -0.36
SSR3-209ENST00000498205 TMEM106CQ9BVX2 250 aa12.78□□□□□ -0.36
SSR3-209ENST00000498205 CHGAP10645 457 aaKnown RBP12.77□□□□□ -0.37
SSR3-209ENST00000498205 TTLL13PA6NNM8 815 aa12.76□□□□□ -0.37
SSR3-209ENST00000498205 GOLGA2Q08379 1002 aa12.76□□□□□ -0.37
SSR3-209ENST00000498205 ASTLQ6HA08 431 aaPredicted RBP12.76□□□□□ -0.37
SSR3-209ENST00000498205 BCL11BQ9C0K0 894 aaPredicted RBP12.75□□□□□ -0.37
SSR3-209ENST00000498205 DNAJC5Q9H3Z4 198 aa12.75□□□□□ -0.37
SSR3-209ENST00000498205 BMP2KQ9NSY1 1161 aaPredicted RBP12.75□□□□□ -0.37
SSR3-209ENST00000498205 STK24Q9Y6E0 443 aa12.75□□□□□ -0.37
SSR3-209ENST00000498205 TRPC6Q9Y210 931 aa12.74□□□□□ -0.37
SSR3-209ENST00000498205 ATMINO43313 823 aaPredicted RBP12.71□□□□□ -0.37
SSR3-209ENST00000498205 BBXQ8WY36 941 aaPredicted RBP12.68□□□□□ -0.38
SSR3-209ENST00000498205 CABP2Q9NPB3 220 aa12.68□□□□□ -0.38
SSR3-209ENST00000498205 TRIM35Q9UPQ4 493 aa12.68□□□□□ -0.38
SSR3-209ENST00000498205 ATN1P54259 1190 aaPredicted RBP12.67□□□□□ -0.38
SSR3-209ENST00000498205 MKRN3Q13064 507 aaKnown RBP12.67□□□□□ -0.38
SSR3-209ENST00000498205 IER5LQ5T953 404 aa12.67□□□□□ -0.38
SSR3-209ENST00000498205 RYDENQ9NUL5 291 aaKnown RBP12.67□□□□□ -0.38
SSR3-209ENST00000498205 SOX12O15370 315 aa12.65□□□□□ -0.38
SSR3-209ENST00000498205 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.65□□□□□ -0.38
SSR3-209ENST00000498205 SLC39A7Q92504 469 aa12.63□□□□□ -0.39
SSR3-209ENST00000498205 C7P10643 843 aa12.6□□□□□ -0.39
SSR3-209ENST00000498205 EFCAB3Q8N7B9 438 aa12.6□□□□□ -0.39
SSR3-209ENST00000498205 POTEIP0CG38 1075 aa12.58□□□□□ -0.4
SSR3-209ENST00000498205 NLRP6P59044 892 aa12.57□□□□□ -0.4
SSR3-209ENST00000498205 SEC24BO95487 1268 aa12.52□□□□□ -0.41
SSR3-209ENST00000498205 ILDR1Q86SU0 546 aaPredicted RBP12.52□□□□□ -0.41
SSR3-209ENST00000498205 PELP1Q8IZL8 1130 aaKnown RBP12.52□□□□□ -0.41
SSR3-209ENST00000498205 OCEL1Q9H607 264 aa12.52□□□□□ -0.41
SSR3-209ENST00000498205 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.52□□□□□ -0.41
SSR3-209ENST00000498205 IRX5P78411 483 aaPredicted RBP12.51□□□□□ -0.41
SSR3-209ENST00000498205 METRNQ9UJH8 293 aa12.51□□□□□ -0.41
SSR3-209ENST00000498205 PLCG2P16885 1265 aa12.5□□□□□ -0.41
SSR3-209ENST00000498205 SPRYD3Q8NCJ5 442 aa12.5□□□□□ -0.41
SSR3-209ENST00000498205 MFRPQ9BY79 579 aa12.5□□□□□ -0.41
SSR3-209ENST00000498205 NKX1-1Q15270 411 aaPredicted RBP12.49□□□□□ -0.41
SSR3-209ENST00000498205 PHF8Q9UPP1 1060 aa12.47□□□□□ -0.41
SSR3-209ENST00000498205 FBXO22Q8NEZ5 403 aa12.46□□□□□ -0.41
SSR3-209ENST00000498205 GTPBP6O43824 516 aaPredicted RBP12.44□□□□□ -0.42
SSR3-209ENST00000498205 PDCD7Q8N8D1 485 aaKnown RBP12.42□□□□□ -0.42
SSR3-209ENST00000498205 L3MBTL3Q96JM7 780 aaPredicted RBP12.42□□□□□ -0.42
SSR3-209ENST00000498205 PLCB2Q00722 1185 aa12.41□□□□□ -0.42
SSR3-209ENST00000498205 PAXIP1Q6ZW49 1069 aaPredicted RBP12.41□□□□□ -0.42
SSR3-209ENST00000498205 G3V3G9 751 aa12.4□□□□□ -0.42
SSR3-209ENST00000498205 CFAP44Q96MT7 982 aa12.4□□□□□ -0.42
SSR3-209ENST00000498205 MS4A4AQ96JQ5 239 aa12.38□□□□□ -0.43
SSR3-209ENST00000498205 COLQQ9Y215 455 aaPredicted RBP12.38□□□□□ -0.43
SSR3-209ENST00000498205 POTEFA5A3E0 1075 aa12.35□□□□□ -0.43
SSR3-209ENST00000498205 BOLA1Q9Y3E2 137 aa12.32□□□□□ -0.44
SSR3-209ENST00000498205 MAMSTRQ6ZN01 415 aa12.3□□□□□ -0.44
SSR3-209ENST00000498205 DPY19L2Q6NUT2 758 aa12.29□□□□□ -0.44
SSR3-209ENST00000498205 TMEM121BQ9BXQ6 578 aaPredicted RBP12.28□□□□□ -0.44
SSR3-209ENST00000498205 MICALL2Q8IY33 904 aa12.27□□□□□ -0.45
SSR3-209ENST00000498205 PPP1R37O75864 691 aa12.26□□□□□ -0.45
SSR3-209ENST00000498205 C3orf67Q6ZVT6 689 aa12.24□□□□□ -0.45
SSR3-209ENST00000498205 SCUBE2Q9NQ36 999 aa12.23□□□□□ -0.45
SSR3-209ENST00000498205 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.21□□□□□ -0.45
SSR3-209ENST00000498205 LHX8Q68G74 356 aa12.2□□□□□ -0.46
SSR3-209ENST00000498205 HAP1P54257 671 aaPredicted RBP12.18□□□□□ -0.46
SSR3-209ENST00000498205 POTEB2H3BUK9 544 aa12.17□□□□□ -0.46
SSR3-209ENST00000498205 PDE4AP27815 886 aa12.14□□□□□ -0.47
SSR3-209ENST00000498205 TMC2Q8TDI7 906 aa12.13□□□□□ -0.47
SSR3-209ENST00000498205 POTEJP0CG39 1038 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms