RNA–Protein interactions for RNA: ENST00000498035.5

HM13-224, Transcript of histocompatibility minor 13, humanhuman

TSL 2 BASIC

Gene HM13, Length 3,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HM13-224ENST00000498035 BAZ1AQ9NRL2 1556 aaPredicted RBP12.63□□□□□ -0.39
HM13-224ENST00000498035 ANP32EQ9BTT0 268 aa12.62□□□□□ -0.39
HM13-224ENST00000498035 ZBTB22O15209 634 aa12.6□□□□□ -0.39
HM13-224ENST00000498035 NAP1L5Q96NT1 182 aaPredicted RBP12.6□□□□□ -0.39
HM13-224ENST00000498035 CCDC9Q9Y3X0 531 aaKnown RBP12.58□□□□□ -0.39
HM13-224ENST00000498035 HNRNPUL2Q1KMD3 747 aaKnown RBP12.57□□□□□ -0.4
HM13-224ENST00000498035 HMGB1P09429 215 aaKnown RBP12.56□□□□□ -0.4
HM13-224ENST00000498035 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.56□□□□□ -0.4
HM13-224ENST00000498035 ZNF326Q5BKZ1 582 aaKnown RBP12.53□□□□□ -0.4
HM13-224ENST00000498035 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.53□□□□□ -0.4
HM13-224ENST00000498035 ITGAEP38570 1179 aa12.51□□□□□ -0.41
HM13-224ENST00000498035 BAZ1BQ9UIG0 1483 aaKnown RBP12.48□□□□□ -0.41
HM13-224ENST00000498035 WIZO95785 1651 aa12.47□□□□□ -0.41
HM13-224ENST00000498035 CLSPNQ9HAW4 1339 aa12.47□□□□□ -0.41
HM13-224ENST00000498035 AAMPQ13685 434 aa12.46□□□□□ -0.41
HM13-224ENST00000498035 SALL2Q9Y467 1007 aaPredicted RBP12.46□□□□□ -0.42
HM13-224ENST00000498035 BCCIPQ9P287 314 aaKnown RBP eCLIP12.44□□□□□ -0.42
HM13-224ENST00000498035 WRNQ14191 1432 aaPredicted RBP eCLIP12.43□□□□□ -0.42
HM13-224ENST00000498035 CCDC88BA6NC98 1476 aa12.42□□□□□ -0.42
HM13-224ENST00000498035 BRPF3Q9ULD4 1205 aa12.42□□□□□ -0.42
HM13-224ENST00000498035 RSPH4AQ5TD94 716 aa12.41□□□□□ -0.42
HM13-224ENST00000498035 NBR1Q14596 966 aa12.4□□□□□ -0.43
HM13-224ENST00000498035 RBM10P98175 930 aaKnown RBP12.39□□□□□ -0.43
HM13-224ENST00000498035 ZNF592Q92610 1267 aa12.38□□□□□ -0.43
HM13-224ENST00000498035 ZNF526Q8TF50 670 aaPredicted RBP12.37□□□□□ -0.43
HM13-224ENST00000498035 DEKP35659 375 aaKnown RBP12.37□□□□□ -0.43
HM13-224ENST00000498035 EEA1Q15075 1411 aa12.36□□□□□ -0.43
HM13-224ENST00000498035 ZFP91Q96JP5 570 aaPredicted RBP12.35□□□□□ -0.43
HM13-224ENST00000498035 TOP2AP11388 1531 aaKnown RBP12.34□□□□□ -0.43
HM13-224ENST00000498035 P3H3Q8IVL6 736 aa12.34□□□□□ -0.43
HM13-224ENST00000498035 PRDM10Q9NQV6 1147 aa12.34□□□□□ -0.43
HM13-224ENST00000498035 ABCC8Q09428 1581 aa12.33□□□□□ -0.44
HM13-224ENST00000498035 SMARCA4P51532 1647 aa12.33□□□□□ -0.44
HM13-224ENST00000498035 ZNF428Q96B54 188 aa12.33□□□□□ -0.44
HM13-224ENST00000498035 ZBTB7CA1YPR0 619 aa12.32□□□□□ -0.44
HM13-224ENST00000498035 GLIPR1L2Q4G1C9 344 aa12.32□□□□□ -0.44
HM13-224ENST00000498035 SOGA1O94964 1423 aa12.32□□□□□ -0.44
HM13-224ENST00000498035 RSPH6AQ9H0K4 717 aa12.32□□□□□ -0.44
HM13-224ENST00000498035 PUS7Q96PZ0 661 aaKnown RBP12.31□□□□□ -0.44
HM13-224ENST00000498035 CEP162Q5TB80 1403 aa12.31□□□□□ -0.44
HM13-224ENST00000498035 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.3□□□□□ -0.44
HM13-224ENST00000498035 FAM50AQ14320 339 aaKnown RBP12.3□□□□□ -0.44
HM13-224ENST00000498035 ADRA2BP18089 450 aa12.29□□□□□ -0.44
HM13-224ENST00000498035 MYT1LQ9UL68 1186 aa12.29□□□□□ -0.44
HM13-224ENST00000498035 GOLGA3Q08378 1498 aa12.28□□□□□ -0.44
HM13-224ENST00000498035 TRHP20396 242 aaPredicted RBP12.28□□□□□ -0.44
HM13-224ENST00000498035 CLIP1P30622 1438 aa12.28□□□□□ -0.44
HM13-224ENST00000498035 SMARCA2P51531 1590 aa12.27□□□□□ -0.44
HM13-224ENST00000498035 TNIKQ9UKE5 1360 aa12.27□□□□□ -0.44
HM13-224ENST00000498035 NECTIN2Q92692 538 aa12.27□□□□□ -0.45
HM13-224ENST00000498035 YTHDC1Q96MU7 727 aaKnown RBP12.26□□□□□ -0.45
HM13-224ENST00000498035 ATAD2BQ9ULI0 1458 aa12.25□□□□□ -0.45
HM13-224ENST00000498035 BICRAQ9NZM4 1560 aa12.25□□□□□ -0.45
HM13-224ENST00000498035 TMED8Q6PL24 325 aaPredicted RBP12.23□□□□□ -0.45
HM13-224ENST00000498035 CWC22Q9HCG8 908 aaKnown RBP12.23□□□□□ -0.45
HM13-224ENST00000498035 ARID4BQ4LE39 1312 aaPredicted RBP12.23□□□□□ -0.45
HM13-224ENST00000498035 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.23□□□□□ -0.45
HM13-224ENST00000498035 NCLP19338 710 aaKnown RBP12.22□□□□□ -0.45
HM13-224ENST00000498035 DIEXFQ68CQ4 756 aaKnown RBP12.22□□□□□ -0.45
HM13-224ENST00000498035 CEP164Q9UPV0 1460 aa12.22□□□□□ -0.45
HM13-224ENST00000498035 TICAM2Q86XR7 235 aa12.21□□□□□ -0.45
HM13-224ENST00000498035 PSMD1Q99460 953 aa12.21□□□□□ -0.46
HM13-224ENST00000498035 USP35Q9P2H5 1018 aa12.2□□□□□ -0.46
HM13-224ENST00000498035 CNPY4Q8N129 248 aa12.19□□□□□ -0.46
HM13-224ENST00000498035 KIF27Q86VH2 1401 aa12.19□□□□□ -0.46
HM13-224ENST00000498035 RBM25P49756 843 aaKnown RBP12.18□□□□□ -0.46
HM13-224ENST00000498035 TSHZ2Q9NRE2 1034 aa12.17□□□□□ -0.46
HM13-224ENST00000498035 ZMYND15Q9H091 742 aa12.17□□□□□ -0.46
HM13-224ENST00000498035 RAD21O60216 631 aa12.16□□□□□ -0.46
HM13-224ENST00000498035 ARID3CA6NKF2 412 aa12.15□□□□□ -0.47
HM13-224ENST00000498035 PPM1GO15355 546 aaPredicted RBP12.14□□□□□ -0.47
HM13-224ENST00000498035 NAP1L2Q9ULW6 460 aaPredicted RBP12.14□□□□□ -0.47
HM13-224ENST00000498035 CLSTN1O94985 981 aa12.13□□□□□ -0.47
HM13-224ENST00000498035 ERICH6BQ5W0A0 696 aa12.13□□□□□ -0.47
HM13-224ENST00000498035 NPM3O75607 178 aaKnown RBP12.12□□□□□ -0.47
HM13-224ENST00000498035 CERS3Q8IU89 383 aa12.12□□□□□ -0.47
HM13-224ENST00000498035 FOXD4L5Q5VV16 416 aaPredicted RBP12.12□□□□□ -0.47
HM13-224ENST00000498035 FOXD4L4Q8WXT5 416 aaPredicted RBP12.12□□□□□ -0.47
HM13-224ENST00000498035 NEUROD1Q13562 356 aa12.12□□□□□ -0.47
HM13-224ENST00000498035 RUSC2Q8N2Y8 1516 aa12.1□□□□□ -0.47
HM13-224ENST00000498035 KCTD17Q8N5Z5 321 aa12.1□□□□□ -0.47
HM13-224ENST00000498035 ZNF316A6NFI3 1004 aaPredicted RBP12.09□□□□□ -0.47
HM13-224ENST00000498035 WWC1Q8IX03 1113 aa12.08□□□□□ -0.48
HM13-224ENST00000498035 CUX2O14529 1486 aa12.07□□□□□ -0.48
HM13-224ENST00000498035 PEG3Q9GZU2 1588 aa12.07□□□□□ -0.48
HM13-224ENST00000498035 TRIM52Q96A61 297 aa12.07□□□□□ -0.48
HM13-224ENST00000498035 ZNF692Q9BU19 519 aaPredicted RBP12.07□□□□□ -0.48
HM13-224ENST00000498035 CADPSQ9ULU8 1353 aa12.05□□□□□ -0.48
HM13-224ENST00000498035 PLCD4Q9BRC7 762 aa12.03□□□□□ -0.48
HM13-224ENST00000498035 MTMR7Q9Y216 660 aa12.03□□□□□ -0.48
HM13-224ENST00000498035 CARMIL1Q5VZK9 1371 aa12.03□□□□□ -0.48
HM13-224ENST00000498035 CHMP4BQ9H444 224 aaKnown RBP12.03□□□□□ -0.48
HM13-224ENST00000498035 PTMSP20962 102 aa12.01□□□□□ -0.49
HM13-224ENST00000498035 C1orf115Q9H7X2 142 aa12.01□□□□□ -0.49
HM13-224ENST00000498035 NCAPD3P42695 1498 aa12.01□□□□□ -0.49
HM13-224ENST00000498035 VPS8Q8N3P4 1428 aa12□□□□□ -0.49
HM13-224ENST00000498035 RAPGEF2Q9Y4G8 1499 aa11.99□□□□□ -0.49
HM13-224ENST00000498035 FAM177A1Q8N128 213 aaPredicted RBP11.99□□□□□ -0.49
HM13-224ENST00000498035 PRDM16Q9HAZ2 1276 aa11.99□□□□□ -0.49
HM13-224ENST00000498035 MTUS2Q5JR59 1369 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms