RNA–Protein interactions for RNA: ENST00000497404.1

CD53-205, Transcript of CD53 molecule, humanhuman

TSL 5

Gene CD53, Length 917 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD53-205ENST00000497404 HMGXB3Q12766 1538 aa9.21□□□□□ -0.94
CD53-205ENST00000497404 REM2Q8IYK8 340 aaPredicted RBP9.2□□□□□ -0.94
CD53-205ENST00000497404 PROM2Q8N271 834 aa9.19□□□□□ -0.94
CD53-205ENST00000497404 SP7Q8TDD2 431 aaPredicted RBP9.18□□□□□ -0.94
CD53-205ENST00000497404 WDR62O43379 1518 aa9.17□□□□□ -0.94
CD53-205ENST00000497404 BAZ1BQ9UIG0 1483 aaKnown RBP9.17□□□□□ -0.94
CD53-205ENST00000497404 SPDYE1Q8NFV5 336 aaPredicted RBP9.16□□□□□ -0.94
CD53-205ENST00000497404 STAG3Q9UJ98 1225 aa9.12□□□□□ -0.95
CD53-205ENST00000497404 ARAP1Q96P48 1450 aa9.11□□□□□ -0.95
CD53-205ENST00000497404 CADPSQ9ULU8 1353 aa9.1□□□□□ -0.95
CD53-205ENST00000497404 PITPNM1O00562 1244 aa9.09□□□□□ -0.95
CD53-205ENST00000497404 SMARCA4P51532 1647 aa9.09□□□□□ -0.95
CD53-205ENST00000497404 PIP4P2Q8N4L2 257 aa9.06□□□□□ -0.96
CD53-205ENST00000497404 CEP164Q9UPV0 1460 aa9.06□□□□□ -0.96
CD53-205ENST00000497404 CLEC11AQ9Y240 323 aa9.05□□□□□ -0.96
CD53-205ENST00000497404 HAX1O00165 279 aa9.03□□□□□ -0.96
CD53-205ENST00000497404 FBXO3Q9UK99 471 aa9.03□□□□□ -0.96
CD53-205ENST00000497404 FANCD2Q9BXW9 1451 aa9.01□□□□□ -0.97
CD53-205ENST00000497404 PRR29P0C7W0 189 aa8.99□□□□□ -0.97
CD53-205ENST00000497404 ZNF608Q9ULD9 1512 aaPredicted RBP8.99□□□□□ -0.97
CD53-205ENST00000497404 URB2Q14146 1524 aaKnown RBP8.96□□□□□ -0.97
CD53-205ENST00000497404 FXR2P51116 673 aaKnown RBP eCLIP8.96□□□□□ -0.98
CD53-205ENST00000497404 RSF1Q96T23 1441 aaPredicted RBP8.94□□□□□ -0.98
CD53-205ENST00000497404 KDM4FA0A1W2PPD8 638 aa8.93□□□□□ -0.98
CD53-205ENST00000497404 PEG3Q9GZU2 1588 aa8.93□□□□□ -0.98
CD53-205ENST00000497404 CHD1O14646 1710 aa8.93□□□□□ -0.98
CD53-205ENST00000497404 EVX2Q03828 476 aa8.89□□□□□ -0.99
CD53-205ENST00000497404 IFT140Q96RY7 1462 aa8.89□□□□□ -0.99
CD53-205ENST00000497404 MROH2BQ7Z745 1585 aa8.88□□□□□ -0.99
CD53-205ENST00000497404 PLEKHG5O94827 1062 aa8.88□□□□□ -0.99
CD53-205ENST00000497404 PRKAR2AP13861 404 aaKnown RBP8.86□□□□□ -0.99
CD53-205ENST00000497404 AQRO60306 1485 aaKnown RBP eCLIP8.85□□□□□ -0.992e-7■■■□□ 17.4
CD53-205ENST00000497404 VASPP50552 380 aaPredicted RBP8.85□□□□□ -0.99
CD53-205ENST00000497404 EIF4G3O43432 1585 aaKnown RBP8.85□□□□□ -0.99
CD53-205ENST00000497404 CREBZFQ9NS37 354 aa8.84□□□□□ -0.99
CD53-205ENST00000497404 MIER1Q8N108 512 aa8.83□□□□□ -1
CD53-205ENST00000497404 PLCD3Q8N3E9 789 aa8.83□□□□□ -1
CD53-205ENST00000497404 FBXO41Q8TF61 875 aa8.83□□□□□ -1
CD53-205ENST00000497404 CFTRP13569 1480 aa8.83□□□□□ -1
CD53-205ENST00000497404 ZBTB47Q9UFB7 747 aaPredicted RBP8.82□□□□□ -1
CD53-205ENST00000497404 CHADLQ6NUI6 762 aa8.8□□□□□ -1
CD53-205ENST00000497404 LMTK3Q96Q04 1460 aa8.8□□□□□ -1
CD53-205ENST00000497404 CHMP7Q8WUX9 453 aaPredicted RBP8.79□□□□□ -1
CD53-205ENST00000497404 GAPVD1Q14C86 1478 aa8.78□□□□□ -1
CD53-205ENST00000497404 NPM1P06748 294 aaKnown RBP eCLIP8.77□□□□□ -1.01
CD53-205ENST00000497404 FARP1Q9Y4F1 1045 aaPredicted RBP8.77□□□□□ -1.01
CD53-205ENST00000497404 CLASP1Q7Z460 1538 aa8.76□□□□□ -1.01
CD53-205ENST00000497404 WIZO95785 1651 aa8.75□□□□□ -1.01
CD53-205ENST00000497404 TOPBP1Q92547 1522 aa8.75□□□□□ -1.01
CD53-205ENST00000497404 SOCS7O14512 581 aa8.75□□□□□ -1.01
CD53-205ENST00000497404 MNX1P50219 401 aaPredicted RBP8.74□□□□□ -1.01
CD53-205ENST00000497404 ILDR2Q71H61 639 aa8.74□□□□□ -1.01
CD53-205ENST00000497404 ERCC6L2Q5T890 1561 aa8.73□□□□□ -1.01
CD53-205ENST00000497404 HECW2Q9P2P5 1572 aa8.73□□□□□ -1.01
CD53-205ENST00000497404 SYNJ1O43426 1573 aa8.73□□□□□ -1.01
CD53-205ENST00000497404 FAM69CQ0P6D2 419 aa8.72□□□□□ -1.01
CD53-205ENST00000497404 KIF13AQ9H1H9 1805 aa8.72□□□□□ -1.01
CD53-205ENST00000497404 TDRD9Q8NDG6 1382 aaKnown RBP8.72□□□□□ -1.01
CD53-205ENST00000497404 SNAPC4Q5SXM2 1469 aa8.7□□□□□ -1.02
CD53-205ENST00000497404 KLHL34Q8N239 644 aa8.7□□□□□ -1.02
CD53-205ENST00000497404 TARBP1Q13395 1621 aaKnown RBP8.69□□□□□ -1.02
CD53-205ENST00000497404 IFNLR1Q8IU57 520 aaPredicted RBP8.68□□□□□ -1.02
CD53-205ENST00000497404 SYNJ2O15056 1496 aa8.67□□□□□ -1.02
CD53-205ENST00000497404 KDM6BO15054 1643 aa8.66□□□□□ -1.02
CD53-205ENST00000497404 ADGRL1O94910 1474 aa8.66□□□□□ -1.02
CD53-205ENST00000497404 RAD54L2Q9Y4B4 1467 aa8.66□□□□□ -1.02
CD53-205ENST00000497404 DISP3Q9P2K9 1392 aa8.66□□□□□ -1.02
CD53-205ENST00000497404 C19orf67A6NJJ6 358 aa8.66□□□□□ -1.02
CD53-205ENST00000497404 GABBR2O75899 941 aa8.65□□□□□ -1.02
CD53-205ENST00000497404 SPOCK2Q92563 424 aa8.65□□□□□ -1.02
CD53-205ENST00000497404 PAK3O75914 559 aaPredicted RBP8.64□□□□□ -1.03
CD53-205ENST00000497404 LHX8Q68G74 356 aa8.64□□□□□ -1.03
CD53-205ENST00000497404 ABCC8Q09428 1581 aa8.64□□□□□ -1.03
CD53-205ENST00000497404 PRDM2Q13029 1718 aa8.63□□□□□ -1.03
CD53-205ENST00000497404 DNMBPQ6XZF7 1577 aa8.63□□□□□ -1.03
CD53-205ENST00000497404 CD44P16070 742 aaKnown RBP8.62□□□□□ -1.03
CD53-205ENST00000497404 NUBP1P53384 320 aa8.62□□□□□ -1.03
CD53-205ENST00000497404 POLA1P09884 1462 aaPredicted RBP8.62□□□□□ -1.03
CD53-205ENST00000497404 SOGA1O94964 1423 aa8.62□□□□□ -1.03
CD53-205ENST00000497404 TSPOAP1O95153 1857 aa8.61□□□□□ -1.03
CD53-205ENST00000497404 MAGI1Q96QZ7 1491 aaPredicted RBP8.6□□□□□ -1.03
CD53-205ENST00000497404 ABCC10Q5T3U5 1492 aa8.59□□□□□ -1.03
CD53-205ENST00000497404 FAM212AQ96EL1 285 aa8.59□□□□□ -1.03
CD53-205ENST00000497404 GSE1Q14687 1217 aa8.57□□□□□ -1.04
CD53-205ENST00000497404 RASEFQ8IZ41 740 aa8.57□□□□□ -1.04
CD53-205ENST00000497404 GRIN2BQ13224 1484 aa8.57□□□□□ -1.04
CD53-205ENST00000497404 CLCN6P51797 869 aa8.55□□□□□ -1.04
CD53-205ENST00000497404 ZRANB1Q9UGI0 708 aa8.55□□□□□ -1.04
CD53-205ENST00000497404 TOP2AP11388 1531 aaKnown RBP8.54□□□□□ -1.04
CD53-205ENST00000497404 CEP170Q5SW79 1584 aa8.54□□□□□ -1.04
CD53-205ENST00000497404 ZNF579Q8NAF0 562 aaKnown RBP8.54□□□□□ -1.04
CD53-205ENST00000497404 DIP2BQ9P265 1576 aa8.53□□□□□ -1.04
CD53-205ENST00000497404 TSPYL2Q9H2G4 693 aaPredicted RBP8.53□□□□□ -1.04
CD53-205ENST00000497404 SLC24A1O60721 1099 aa8.52□□□□□ -1.05
CD53-205ENST00000497404 DCAF8Q5TAQ9 597 aa8.52□□□□□ -1.05
CD53-205ENST00000497404 CCDC61Q9Y6R9 512 aa8.51□□□□□ -1.05
CD53-205ENST00000497404 CCDC88BA6NC98 1476 aa8.51□□□□□ -1.05
CD53-205ENST00000497404 FGD5Q6ZNL6 1462 aa8.49□□□□□ -1.05
CD53-205ENST00000497404 CIZ1Q9ULV3 898 aaPredicted RBP8.48□□□□□ -1.05
CD53-205ENST00000497404 PRG4Q92954 1404 aaPredicted RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms