RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 RNF39Q9H2S5 420 aa4.93□□□□□ -1.62
CKS1BP2-201ENST00000497342 TMEM132AQ24JP5 1023 aa4.92□□□□□ -1.62
CKS1BP2-201ENST00000497342 KLHL34Q8N239 644 aa4.92□□□□□ -1.62
CKS1BP2-201ENST00000497342 ZBTB47Q9UFB7 747 aaPredicted RBP4.92□□□□□ -1.62
CKS1BP2-201ENST00000497342 NBR1Q14596 966 aa4.91□□□□□ -1.62
CKS1BP2-201ENST00000497342 OSCARQ8IYS5 282 aa4.91□□□□□ -1.62
CKS1BP2-201ENST00000497342 FBXO41Q8TF61 875 aa4.91□□□□□ -1.62
CKS1BP2-201ENST00000497342 NACADO15069 1562 aa4.91□□□□□ -1.62
CKS1BP2-201ENST00000497342 C1QBPQ07021 282 aaKnown RBP4.9□□□□□ -1.63
CKS1BP2-201ENST00000497342 SGIP1Q9BQI5 828 aa4.9□□□□□ -1.63
CKS1BP2-201ENST00000497342 DAXXQ9UER7 740 aaPredicted RBP4.9□□□□□ -1.63
CKS1BP2-201ENST00000497342 GTF3C3Q9Y5Q9 886 aa4.9□□□□□ -1.63
CKS1BP2-201ENST00000497342 CHGAP10645 457 aaKnown RBP4.89□□□□□ -1.63
CKS1BP2-201ENST00000497342 GTPBP6O43824 516 aaPredicted RBP4.88□□□□□ -1.63
CKS1BP2-201ENST00000497342 NKX1-1Q15270 411 aaPredicted RBP4.88□□□□□ -1.63
CKS1BP2-201ENST00000497342 RNF25Q96BH1 459 aaPredicted RBP4.88□□□□□ -1.63
CKS1BP2-201ENST00000497342 PLCD3Q8N3E9 789 aa4.87□□□□□ -1.63
CKS1BP2-201ENST00000497342 ZNF692Q9BU19 519 aaPredicted RBP4.87□□□□□ -1.63
CKS1BP2-201ENST00000497342 SHROOM4Q9ULL8 1493 aa4.87□□□□□ -1.63
CKS1BP2-201ENST00000497342 TULP1O00294 542 aaPredicted RBP4.86□□□□□ -1.63
CKS1BP2-201ENST00000497342 RIMBP3CA6NJZ7 1639 aa4.86□□□□□ -1.63
CKS1BP2-201ENST00000497342 RIMBP3BA6NNM3 1639 aa4.86□□□□□ -1.63
CKS1BP2-201ENST00000497342 RIMBP3Q9UFD9 1639 aa4.86□□□□□ -1.63
CKS1BP2-201ENST00000497342 CHRM1P11229 460 aaPredicted RBP4.85□□□□□ -1.63
CKS1BP2-201ENST00000497342 GSE1Q14687 1217 aa4.85□□□□□ -1.63
CKS1BP2-201ENST00000497342 MIER1Q8N108 512 aa4.84□□□□□ -1.63
CKS1BP2-201ENST00000497342 CAPN15O75808 1086 aa4.83□□□□□ -1.64
CKS1BP2-201ENST00000497342 NUBP1P53384 320 aa4.83□□□□□ -1.64
CKS1BP2-201ENST00000497342 CYB5RLQ6IPT4 315 aa4.83□□□□□ -1.64
CKS1BP2-201ENST00000497342 RYDENQ9NUL5 291 aaKnown RBP4.82□□□□□ -1.64
CKS1BP2-201ENST00000497342 RIOK3O14730 519 aaKnown RBP4.81□□□□□ -1.64
CKS1BP2-201ENST00000497342 PLEKHG5O94827 1062 aa4.81□□□□□ -1.64
CKS1BP2-201ENST00000497342 P3H3Q8IVL6 736 aa4.81□□□□□ -1.64
CKS1BP2-201ENST00000497342 DSG3P32926 999 aa4.8□□□□□ -1.64
CKS1BP2-201ENST00000497342 KDM4FA0A1W2PPD8 638 aa4.79□□□□□ -1.64
CKS1BP2-201ENST00000497342 VGFO15240 615 aaPredicted RBP4.79□□□□□ -1.64
CKS1BP2-201ENST00000497342 CIZ1Q9ULV3 898 aaPredicted RBP4.79□□□□□ -1.64
CKS1BP2-201ENST00000497342 DISP3Q9P2K9 1392 aa4.78□□□□□ -1.64
CKS1BP2-201ENST00000497342 ARHGEF11O15085 1522 aa4.78□□□□□ -1.64
CKS1BP2-201ENST00000497342 BAZ1AQ9NRL2 1556 aaPredicted RBP4.78□□□□□ -1.64
CKS1BP2-201ENST00000497342 HOMEZQ8IX15 550 aa4.77□□□□□ -1.65
CKS1BP2-201ENST00000497342 THOC2Q8NI27 1593 aaKnown RBP4.77□□□□□ -1.65
CKS1BP2-201ENST00000497342 ERCC6L2Q5T890 1561 aa4.76□□□□□ -1.65
CKS1BP2-201ENST00000497342 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.76□□□□□ -1.65
CKS1BP2-201ENST00000497342 ABCB7O75027 752 aa4.75□□□□□ -1.65
CKS1BP2-201ENST00000497342 MNX1P50219 401 aaPredicted RBP4.75□□□□□ -1.65
CKS1BP2-201ENST00000497342 BRPF1P55201 1214 aaPredicted RBP4.72□□□□□ -1.65
CKS1BP2-201ENST00000497342 STK25O00506 426 aa4.71□□□□□ -1.66
CKS1BP2-201ENST00000497342 LMOD2Q6P5Q4 547 aa4.71□□□□□ -1.66
CKS1BP2-201ENST00000497342 KCNV2Q8TDN2 545 aa4.71□□□□□ -1.66
CKS1BP2-201ENST00000497342 NESP48681 1621 aa4.71□□□□□ -1.66
CKS1BP2-201ENST00000497342 FAM212AQ96EL1 285 aa4.7□□□□□ -1.66
CKS1BP2-201ENST00000497342 ARAP1Q96P48 1450 aa4.69□□□□□ -1.66
CKS1BP2-201ENST00000497342 C14orf37Q86TY3 774 aa4.69□□□□□ -1.66
CKS1BP2-201ENST00000497342 ARHGEF1Q92888 912 aaKnown RBP4.69□□□□□ -1.66
CKS1BP2-201ENST00000497342 ARIH1Q9Y4X5 557 aaPredicted RBP4.69□□□□□ -1.66
CKS1BP2-201ENST00000497342 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.68□□□□□ -1.66
CKS1BP2-201ENST00000497342 ZFP91Q96JP5 570 aaPredicted RBP4.68□□□□□ -1.66
CKS1BP2-201ENST00000497342 BCL11BQ9C0K0 894 aaPredicted RBP4.68□□□□□ -1.66
CKS1BP2-201ENST00000497342 CREBZFQ9NS37 354 aa4.68□□□□□ -1.66
CKS1BP2-201ENST00000497342 HECW2Q9P2P5 1572 aa4.67□□□□□ -1.66
CKS1BP2-201ENST00000497342 TESPA1A2RU30 521 aaPredicted RBP4.66□□□□□ -1.66
CKS1BP2-201ENST00000497342 ZC3H15Q8WU90 426 aaKnown RBP4.66□□□□□ -1.66
CKS1BP2-201ENST00000497342 DCAF8Q5TAQ9 597 aa4.65□□□□□ -1.67
CKS1BP2-201ENST00000497342 CADPS2Q86UW7 1296 aa4.65□□□□□ -1.67
CKS1BP2-201ENST00000497342 SYNJ2O15056 1496 aa4.64□□□□□ -1.67
CKS1BP2-201ENST00000497342 RASEFQ8IZ41 740 aa4.64□□□□□ -1.67
CKS1BP2-201ENST00000497342 SPDYE1Q8NFV5 336 aaPredicted RBP4.64□□□□□ -1.67
CKS1BP2-201ENST00000497342 STK24Q9Y6E0 443 aa4.64□□□□□ -1.67
CKS1BP2-201ENST00000497342 SMARCA2P51531 1590 aa4.64□□□□□ -1.67
CKS1BP2-201ENST00000497342 MYO15BQ96JP2 1530 aa4.63□□□□□ -1.67
CKS1BP2-201ENST00000497342 ZMYND10O75800 440 aa4.63□□□□□ -1.67
CKS1BP2-201ENST00000497342 AKT1S1Q96B36 256 aa4.62□□□□□ -1.67
CKS1BP2-201ENST00000497342 ZNF467Q7Z7K2 595 aaPredicted RBP4.61□□□□□ -1.67
CKS1BP2-201ENST00000497342 WDR70Q9NW82 654 aa4.61□□□□□ -1.67
CKS1BP2-201ENST00000497342 SPATA31D1Q6ZQQ2 1576 aa4.61□□□□□ -1.67
CKS1BP2-201ENST00000497342 MFSD10Q14728 455 aa4.6□□□□□ -1.67
CKS1BP2-201ENST00000497342 MFRPQ9BY79 579 aa4.6□□□□□ -1.67
CKS1BP2-201ENST00000497342 PDAP1Q13442 181 aaKnown RBP4.59□□□□□ -1.67
CKS1BP2-201ENST00000497342 E2F4Q16254 413 aa4.59□□□□□ -1.67
CKS1BP2-201ENST00000497342 BARGINQ6ZT62 677 aa4.59□□□□□ -1.67
CKS1BP2-201ENST00000497342 FBXO22Q8NEZ5 403 aa4.59□□□□□ -1.67
CKS1BP2-201ENST00000497342 NCAPD3P42695 1498 aa4.58□□□□□ -1.68
CKS1BP2-201ENST00000497342 CAMK2BQ13554 666 aa4.58□□□□□ -1.68
CKS1BP2-201ENST00000497342 SCRIBQ14160 1630 aa4.57□□□□□ -1.68
CKS1BP2-201ENST00000497342 WDR62O43379 1518 aa4.56□□□□□ -1.68
CKS1BP2-201ENST00000497342 PDS5BQ9NTI5 1447 aa4.56□□□□□ -1.68
CKS1BP2-201ENST00000497342 PYGBP11216 843 aa4.56□□□□□ -1.68
CKS1BP2-201ENST00000497342 NEUROD2Q15784 382 aa4.56□□□□□ -1.68
CKS1BP2-201ENST00000497342 ZNF579Q8NAF0 562 aaKnown RBP4.56□□□□□ -1.68
CKS1BP2-201ENST00000497342 RBM42Q9BTD8 480 aaKnown RBP4.56□□□□□ -1.68
CKS1BP2-201ENST00000497342 SLC24A3Q9HC58 644 aa4.56□□□□□ -1.68
CKS1BP2-201ENST00000497342 KIF21AQ7Z4S6 1674 aa4.56□□□□□ -1.68
CKS1BP2-201ENST00000497342 MRC2Q9UBG0 1479 aa4.56□□□□□ -1.68
CKS1BP2-201ENST00000497342 RSF1Q96T23 1441 aaPredicted RBP4.55□□□□□ -1.68
CKS1BP2-201ENST00000497342 SOX12O15370 315 aa4.55□□□□□ -1.68
CKS1BP2-201ENST00000497342 PRR29P0C7W0 189 aa4.55□□□□□ -1.68
CKS1BP2-201ENST00000497342 SMYD5Q6GMV2 418 aa4.55□□□□□ -1.68
CKS1BP2-201ENST00000497342 SEMA3EO15041 775 aa4.54□□□□□ -1.68
CKS1BP2-201ENST00000497342 CRISPLD2Q9H0B8 497 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms