RNA–Protein interactions for RNA: ENST00000497236.1

CRIM1-208, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 240 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-208ENST00000497236 CLEC11AQ9Y240 323 aa4.06□□□□□ -1.76
CRIM1-208ENST00000497236 PITPNM1O00562 1244 aa4.05□□□□□ -1.76
CRIM1-208ENST00000497236 NEFLP07196 543 aa4.05□□□□□ -1.76
CRIM1-208ENST00000497236 CHRDL2Q6WN34 429 aa4.05□□□□□ -1.76
CRIM1-208ENST00000497236 YTHDC1Q96MU7 727 aaKnown RBP4.05□□□□□ -1.76
CRIM1-208ENST00000497236 STAG3Q9UJ98 1225 aa4.05□□□□□ -1.76
CRIM1-208ENST00000497236 MIER1Q8N108 512 aa4.03□□□□□ -1.76
CRIM1-208ENST00000497236 PRR29P0C7W0 189 aa4.02□□□□□ -1.77
CRIM1-208ENST00000497236 PROM2Q8N271 834 aa4.01□□□□□ -1.77
CRIM1-208ENST00000497236 UBE2Q2Q8WVN8 375 aa4.01□□□□□ -1.77
CRIM1-208ENST00000497236 EEA1Q15075 1411 aa4.01□□□□□ -1.77
CRIM1-208ENST00000497236 TIMELESSQ9UNS1 1208 aa4□□□□□ -1.77
CRIM1-208ENST00000497236 RBM19Q9Y4C8 960 aaKnown RBP4□□□□□ -1.77
CRIM1-208ENST00000497236 FBXO3Q9UK99 471 aa3.99□□□□□ -1.77
CRIM1-208ENST00000497236 CDK11AQ9UQ88 783 aaPredicted RBP3.99□□□□□ -1.77
CRIM1-208ENST00000497236 CCER2I3L3R5 266 aa3.98□□□□□ -1.77
CRIM1-208ENST00000497236 FXR2P51116 673 aaKnown RBP eCLIP3.98□□□□□ -1.77
CRIM1-208ENST00000497236 GLIPR1L2Q4G1C9 344 aa3.98□□□□□ -1.77
CRIM1-208ENST00000497236 POTEHQ6S545 545 aa3.98□□□□□ -1.77
CRIM1-208ENST00000497236 PIP4P2Q8N4L2 257 aa3.98□□□□□ -1.77
CRIM1-208ENST00000497236 USP35Q9P2H5 1018 aa3.98□□□□□ -1.77
CRIM1-208ENST00000497236 TNIKQ9UKE5 1360 aa3.98□□□□□ -1.77
CRIM1-208ENST00000497236 PLEKHG5O94827 1062 aa3.97□□□□□ -1.77
CRIM1-208ENST00000497236 RB1CC1Q8TDY2 1594 aa3.97□□□□□ -1.77
CRIM1-208ENST00000497236 PRKAR2AP13861 404 aaKnown RBP3.96□□□□□ -1.78
CRIM1-208ENST00000497236 DAXXQ9UER7 740 aaPredicted RBP3.96□□□□□ -1.78
CRIM1-208ENST00000497236 SLC24A1O60721 1099 aa3.95□□□□□ -1.78
CRIM1-208ENST00000497236 DEKP35659 375 aaKnown RBP3.94□□□□□ -1.78
CRIM1-208ENST00000497236 RTL5Q5HYW3 569 aaPredicted RBP3.94□□□□□ -1.78
CRIM1-208ENST00000497236 RSF1Q96T23 1441 aaPredicted RBP3.94□□□□□ -1.78
CRIM1-208ENST00000497236 C11orf95C9JLR9 678 aaPredicted RBP3.93□□□□□ -1.78
CRIM1-208ENST00000497236 PLCD3Q8N3E9 789 aa3.93□□□□□ -1.78
CRIM1-208ENST00000497236 ABCC9O60706 1549 aa3.93□□□□□ -1.78
CRIM1-208ENST00000497236 EIF5BO60841 1220 aaKnown RBP3.92□□□□□ -1.78
CRIM1-208ENST00000497236 CHADLQ6NUI6 762 aa3.92□□□□□ -1.78
CRIM1-208ENST00000497236 RSPH6AQ9H0K4 717 aa3.92□□□□□ -1.78
CRIM1-208ENST00000497236 ZBTB47Q9UFB7 747 aaPredicted RBP3.92□□□□□ -1.78
CRIM1-208ENST00000497236 NPM1P06748 294 aaKnown RBP eCLIP3.91□□□□□ -1.78
CRIM1-208ENST00000497236 CREBZFQ9NS37 354 aa3.91□□□□□ -1.78
CRIM1-208ENST00000497236 PPP4R2Q9NY27 417 aa3.91□□□□□ -1.78
CRIM1-208ENST00000497236 CEP162Q5TB80 1403 aa3.9□□□□□ -1.78
CRIM1-208ENST00000497236 PPM1GO15355 546 aaPredicted RBP3.9□□□□□ -1.79
CRIM1-208ENST00000497236 FARP1Q9Y4F1 1045 aaPredicted RBP3.9□□□□□ -1.79
CRIM1-208ENST00000497236 HAX1O00165 279 aa3.89□□□□□ -1.79
CRIM1-208ENST00000497236 ANP32CO43423 234 aa3.89□□□□□ -1.79
CRIM1-208ENST00000497236 ANP32AP39687 249 aaKnown RBP3.89□□□□□ -1.79
CRIM1-208ENST00000497236 VASPP50552 380 aaPredicted RBP3.89□□□□□ -1.79
CRIM1-208ENST00000497236 NOP58Q9Y2X3 529 aaKnown RBP3.89□□□□□ -1.79
CRIM1-208ENST00000497236 PAK3O75914 559 aaPredicted RBP3.88□□□□□ -1.79
CRIM1-208ENST00000497236 DCAF8L2P0C7V8 631 aa3.87□□□□□ -1.79
CRIM1-208ENST00000497236 KLHL34Q8N239 644 aa3.87□□□□□ -1.79
CRIM1-208ENST00000497236 IPO9Q96P70 1041 aaKnown RBP3.87□□□□□ -1.79
CRIM1-208ENST00000497236 CUX2O14529 1486 aa3.86□□□□□ -1.79
CRIM1-208ENST00000497236 GOLGA3Q08378 1498 aa3.86□□□□□ -1.79
CRIM1-208ENST00000497236 CEP164Q9UPV0 1460 aa3.86□□□□□ -1.79
CRIM1-208ENST00000497236 CCDC136Q96JN2 1154 aa3.86□□□□□ -1.79
CRIM1-208ENST00000497236 WASHC2AQ641Q2 1341 aa3.86□□□□□ -1.79
CRIM1-208ENST00000497236 WASHC2CQ9Y4E1 1318 aa3.86□□□□□ -1.79
CRIM1-208ENST00000497236 C19orf67A6NJJ6 358 aa3.85□□□□□ -1.79
CRIM1-208ENST00000497236 CD44P16070 742 aaKnown RBP3.85□□□□□ -1.79
CRIM1-208ENST00000497236 MNX1P50219 401 aaPredicted RBP3.85□□□□□ -1.79
CRIM1-208ENST00000497236 ANO8Q9HCE9 1232 aaPredicted RBP3.85□□□□□ -1.79
CRIM1-208ENST00000497236 DHX57Q6P158 1386 aaKnown RBP3.85□□□□□ -1.79
CRIM1-208ENST00000497236 BAZ1BQ9UIG0 1483 aaKnown RBP3.85□□□□□ -1.79
CRIM1-208ENST00000497236 UBTFP17480 764 aaKnown RBP3.84□□□□□ -1.79
CRIM1-208ENST00000497236 DDRGK1Q96HY6 314 aa3.84□□□□□ -1.79
CRIM1-208ENST00000497236 VPS8Q8N3P4 1428 aa3.84□□□□□ -1.79
CRIM1-208ENST00000497236 PPP1R15AO75807 674 aaPredicted RBP3.83□□□□□ -1.8
CRIM1-208ENST00000497236 MS4A1P11836 297 aa3.83□□□□□ -1.8
CRIM1-208ENST00000497236 FAM43AQ8N2R8 423 aa3.83□□□□□ -1.8
CRIM1-208ENST00000497236 PKNOX2Q96KN3 472 aa3.83□□□□□ -1.8
CRIM1-208ENST00000497236 ARID4BQ4LE39 1312 aaPredicted RBP3.83□□□□□ -1.8
CRIM1-208ENST00000497236 TCERG1O14776 1098 aaKnown RBP3.82□□□□□ -1.8
CRIM1-208ENST00000497236 RRP9O43818 475 aaKnown RBP3.82□□□□□ -1.8
CRIM1-208ENST00000497236 NCLP19338 710 aaKnown RBP3.82□□□□□ -1.8
CRIM1-208ENST00000497236 CLCN6P51797 869 aa3.82□□□□□ -1.8
CRIM1-208ENST00000497236 SPOCK2Q92563 424 aa3.82□□□□□ -1.8
CRIM1-208ENST00000497236 FAM212AQ96EL1 285 aa3.82□□□□□ -1.8
CRIM1-208ENST00000497236 ZRANB1Q9UGI0 708 aa3.82□□□□□ -1.8
CRIM1-208ENST00000497236 CLIP1P30622 1438 aa3.81□□□□□ -1.8
CRIM1-208ENST00000497236 RRBP1Q9P2E9 1410 aaKnown RBP3.81□□□□□ -1.8
CRIM1-208ENST00000497236 IFNLR1Q8IU57 520 aaPredicted RBP3.81□□□□□ -1.8
CRIM1-208ENST00000497236 SP7Q8TDD2 431 aaPredicted RBP3.81□□□□□ -1.8
CRIM1-208ENST00000497236 BCANQ96GW7 911 aa3.81□□□□□ -1.8
CRIM1-208ENST00000497236 SALL2Q9Y467 1007 aaPredicted RBP3.81□□□□□ -1.8
CRIM1-208ENST00000497236 NUBP1P53384 320 aa3.8□□□□□ -1.8
CRIM1-208ENST00000497236 GSE1Q14687 1217 aa3.8□□□□□ -1.8
CRIM1-208ENST00000497236 TSPYL2Q9H2G4 693 aaPredicted RBP3.8□□□□□ -1.8
CRIM1-208ENST00000497236 ZBED9Q6R2W3 1325 aa3.79□□□□□ -1.8
CRIM1-208ENST00000497236 NEFMP07197 916 aa3.79□□□□□ -1.8
CRIM1-208ENST00000497236 L1TD1Q5T7N2 865 aaKnown RBP3.79□□□□□ -1.8
CRIM1-208ENST00000497236 DCAF8Q5TAQ9 597 aa3.79□□□□□ -1.8
CRIM1-208ENST00000497236 RASEFQ8IZ41 740 aa3.79□□□□□ -1.8
CRIM1-208ENST00000497236 ZNF579Q8NAF0 562 aaKnown RBP3.79□□□□□ -1.8
CRIM1-208ENST00000497236 KIF21BO75037 1637 aa3.79□□□□□ -1.8
CRIM1-208ENST00000497236 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.78□□□□□ -1.8
CRIM1-208ENST00000497236 EVX2Q03828 476 aa3.78□□□□□ -1.8
CRIM1-208ENST00000497236 DDX10Q13206 875 aaKnown RBP3.78□□□□□ -1.8
CRIM1-208ENST00000497236 MAP7D2Q96T17 732 aa3.78□□□□□ -1.8
CRIM1-208ENST00000497236 ISY1Q9ULR0 285 aaKnown RBP3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms