RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 DCAF8Q5TAQ9 597 aa6.23□□□□□ -1.41
SNRNP48-202ENST00000496946 CCDC61Q9Y6R9 512 aa6.23□□□□□ -1.41
SNRNP48-202ENST00000496946 PKD2Q13563 968 aa6.22□□□□□ -1.41
SNRNP48-202ENST00000496946 MAP3K13O43283 966 aa6.21□□□□□ -1.42
SNRNP48-202ENST00000496946 RNF25Q96BH1 459 aaPredicted RBP6.21□□□□□ -1.42
SNRNP48-202ENST00000496946 SPOCK2Q92563 424 aa6.2□□□□□ -1.42
SNRNP48-202ENST00000496946 PCDHB8Q9UN66 801 aa6.19□□□□□ -1.42
SNRNP48-202ENST00000496946 PCDHB13Q9Y5F0 798 aa6.19□□□□□ -1.42
SNRNP48-202ENST00000496946 NPM1P06748 294 aaKnown RBP eCLIP6.18□□□□□ -1.42
SNRNP48-202ENST00000496946 FAM212AQ96EL1 285 aa6.17□□□□□ -1.42
SNRNP48-202ENST00000496946 MS4A3Q96HJ5 214 aa6.17□□□□□ -1.42
SNRNP48-202ENST00000496946 RGL2O15211 777 aa6.16□□□□□ -1.42
SNRNP48-202ENST00000496946 IFNL1Q8IU54 200 aa6.16□□□□□ -1.42
SNRNP48-202ENST00000496946 SP7Q8TDD2 431 aaPredicted RBP6.16□□□□□ -1.42
SNRNP48-202ENST00000496946 GABBR2O75899 941 aa6.16□□□□□ -1.42
SNRNP48-202ENST00000496946 ZBTB47Q9UFB7 747 aaPredicted RBP6.15□□□□□ -1.43
SNRNP48-202ENST00000496946 KIF12Q96FN5 646 aa6.14□□□□□ -1.43
SNRNP48-202ENST00000496946 PAK3O75914 559 aaPredicted RBP6.12□□□□□ -1.43
SNRNP48-202ENST00000496946 ECM2O94769 699 aaPredicted RBP6.12□□□□□ -1.43
SNRNP48-202ENST00000496946 POTEIP0CG38 1075 aa6.12□□□□□ -1.43
SNRNP48-202ENST00000496946 DCAF8L2P0C7V8 631 aa6.11□□□□□ -1.43
SNRNP48-202ENST00000496946 ZNF579Q8NAF0 562 aaKnown RBP6.11□□□□□ -1.43
SNRNP48-202ENST00000496946 PELP1Q8IZL8 1130 aaKnown RBP6.1□□□□□ -1.43
SNRNP48-202ENST00000496946 SLC24A1O60721 1099 aa6.09□□□□□ -1.44
SNRNP48-202ENST00000496946 BMP2KQ9NSY1 1161 aaPredicted RBP6.05□□□□□ -1.44
SNRNP48-202ENST00000496946 ATN1P54259 1190 aaPredicted RBP6.05□□□□□ -1.44
SNRNP48-202ENST00000496946 GSE1Q14687 1217 aa6.04□□□□□ -1.44
SNRNP48-202ENST00000496946 TTLL13PA6NNM8 815 aa6.04□□□□□ -1.44
SNRNP48-202ENST00000496946 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.03□□□□□ -1.44
SNRNP48-202ENST00000496946 ZFP91Q96JP5 570 aaPredicted RBP6.03□□□□□ -1.44
SNRNP48-202ENST00000496946 TMEM106CQ9BVX2 250 aa6.03□□□□□ -1.44
SNRNP48-202ENST00000496946 DCBLD2Q96PD2 775 aa6.02□□□□□ -1.45
SNRNP48-202ENST00000496946 TRIM35Q9UPQ4 493 aa6.02□□□□□ -1.45
SNRNP48-202ENST00000496946 STK25O00506 426 aa6.01□□□□□ -1.45
SNRNP48-202ENST00000496946 BCL11BQ9C0K0 894 aaPredicted RBP6.01□□□□□ -1.45
SNRNP48-202ENST00000496946 CABP2Q9NPB3 220 aa6.01□□□□□ -1.45
SNRNP48-202ENST00000496946 CHGAP10645 457 aaKnown RBP6□□□□□ -1.45
SNRNP48-202ENST00000496946 POTEB2H3BUK9 544 aa6□□□□□ -1.45
SNRNP48-202ENST00000496946 COLQQ9Y215 455 aaPredicted RBP6□□□□□ -1.45
SNRNP48-202ENST00000496946 RIOK3O14730 519 aaKnown RBP5.99□□□□□ -1.45
SNRNP48-202ENST00000496946 PSEN1P49768 467 aa5.99□□□□□ -1.45
SNRNP48-202ENST00000496946 ATMINO43313 823 aaPredicted RBP5.98□□□□□ -1.45
SNRNP48-202ENST00000496946 POTEFA5A3E0 1075 aa5.97□□□□□ -1.45
SNRNP48-202ENST00000496946 AMER1Q5JTC6 1135 aaPredicted RBP5.97□□□□□ -1.45
SNRNP48-202ENST00000496946 STK24Q9Y6E0 443 aa5.97□□□□□ -1.45
SNRNP48-202ENST00000496946 DPY19L2Q6NUT2 758 aa5.97□□□□□ -1.45
SNRNP48-202ENST00000496946 EFCAB3Q8N7B9 438 aa5.96□□□□□ -1.45
SNRNP48-202ENST00000496946 NKX1-1Q15270 411 aaPredicted RBP5.96□□□□□ -1.46
SNRNP48-202ENST00000496946 ASTLQ6HA08 431 aaPredicted RBP5.95□□□□□ -1.46
SNRNP48-202ENST00000496946 POTEJP0CG39 1038 aa5.95□□□□□ -1.46
SNRNP48-202ENST00000496946 ZNF467Q7Z7K2 595 aaPredicted RBP5.95□□□□□ -1.46
SNRNP48-202ENST00000496946 CHRM1P11229 460 aaPredicted RBP5.94□□□□□ -1.46
SNRNP48-202ENST00000496946 PDAP1Q13442 181 aaKnown RBP5.94□□□□□ -1.46
SNRNP48-202ENST00000496946 METRNQ9UJH8 293 aa5.94□□□□□ -1.46
SNRNP48-202ENST00000496946 PHF8Q9UPP1 1060 aa5.93□□□□□ -1.46
SNRNP48-202ENST00000496946 TIE1P35590 1138 aa5.91□□□□□ -1.46
SNRNP48-202ENST00000496946 VGFO15240 615 aaPredicted RBP5.9□□□□□ -1.47
SNRNP48-202ENST00000496946 PPP1R37O75864 691 aa5.9□□□□□ -1.47
SNRNP48-202ENST00000496946 MS4A4AQ96JQ5 239 aa5.9□□□□□ -1.47
SNRNP48-202ENST00000496946 MFRPQ9BY79 579 aa5.9□□□□□ -1.47
SNRNP48-202ENST00000496946 PDCD7Q8N8D1 485 aaKnown RBP5.89□□□□□ -1.47
SNRNP48-202ENST00000496946 SGIP1Q9BQI5 828 aa5.89□□□□□ -1.47
SNRNP48-202ENST00000496946 GOLGA2Q08379 1002 aa5.88□□□□□ -1.47
SNRNP48-202ENST00000496946 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.88□□□□□ -1.471e-6■■■■□ 22
SNRNP48-202ENST00000496946 SEC24BO95487 1268 aa5.87□□□□□ -1.47
SNRNP48-202ENST00000496946 IRX5P78411 483 aaPredicted RBP5.86□□□□□ -1.47
SNRNP48-202ENST00000496946 MKRN3Q13064 507 aaKnown RBP5.86□□□□□ -1.47
SNRNP48-202ENST00000496946 TRIM41Q8WV44 630 aa5.85□□□□□ -1.47
SNRNP48-202ENST00000496946 HS6ST3Q8IZP7 471 aa5.84□□□□□ -1.47
SNRNP48-202ENST00000496946 FBXO22Q8NEZ5 403 aa5.83□□□□□ -1.48
SNRNP48-202ENST00000496946 CFAP44Q96MT7 982 aa5.83□□□□□ -1.48
SNRNP48-202ENST00000496946 OTUD5Q96G74 571 aa5.81□□□□□ -1.48
SNRNP48-202ENST00000496946 PLCG2P16885 1265 aa5.81□□□□□ -1.48
SNRNP48-202ENST00000496946 GTPBP6O43824 516 aaPredicted RBP5.8□□□□□ -1.48
SNRNP48-202ENST00000496946 PAXIP1Q6ZW49 1069 aaPredicted RBP5.8□□□□□ -1.48
SNRNP48-202ENST00000496946 C7P10643 843 aa5.8□□□□□ -1.48
SNRNP48-202ENST00000496946 LHX8Q68G74 356 aa5.8□□□□□ -1.48
SNRNP48-202ENST00000496946 TMEM92Q6UXU6 159 aa5.8□□□□□ -1.48
SNRNP48-202ENST00000496946 SLC39A7Q92504 469 aa5.8□□□□□ -1.48
SNRNP48-202ENST00000496946 OCEL1Q9H607 264 aa5.8□□□□□ -1.48
SNRNP48-202ENST00000496946 CLCN6P51797 869 aa5.78□□□□□ -1.48
SNRNP48-202ENST00000496946 CADPS2Q86UW7 1296 aa5.78□□□□□ -1.48
SNRNP48-202ENST00000496946 ILDR1Q86SU0 546 aaPredicted RBP5.77□□□□□ -1.49
SNRNP48-202ENST00000496946 MICALL2Q8IY33 904 aa5.76□□□□□ -1.49
SNRNP48-202ENST00000496946 IER5LQ5T953 404 aa5.74□□□□□ -1.49
SNRNP48-202ENST00000496946 TSHZ2Q9NRE2 1034 aa5.74□□□□□ -1.49
SNRNP48-202ENST00000496946 BOLA1Q9Y3E2 137 aa5.74□□□□□ -1.49
SNRNP48-202ENST00000496946 MYT1Q01538 1121 aa5.74□□□□□ -1.49
SNRNP48-202ENST00000496946 NLRP6P59044 892 aa5.72□□□□□ -1.49
SNRNP48-202ENST00000496946 SOX12O15370 315 aa5.71□□□□□ -1.5
SNRNP48-202ENST00000496946 SLAIN1Q8ND83 568 aa5.71□□□□□ -1.5
SNRNP48-202ENST00000496946 C3orf67Q6ZVT6 689 aa5.7□□□□□ -1.5
SNRNP48-202ENST00000496946 SPRYD3Q8NCJ5 442 aa5.7□□□□□ -1.5
SNRNP48-202ENST00000496946 BBXQ8WY36 941 aaPredicted RBP5.7□□□□□ -1.5
SNRNP48-202ENST00000496946 TAOK2Q9UL54 1235 aa5.7□□□□□ -1.5
SNRNP48-202ENST00000496946 NCKAP5LQ9HCH0 1330 aa5.7□□□□□ -1.5
SNRNP48-202ENST00000496946 C2orf72A6NCS6 295 aa5.7□□□□□ -1.5
SNRNP48-202ENST00000496946 MARVELD3Q96A59 401 aa5.68□□□□□ -1.5
SNRNP48-202ENST00000496946 PLCB2Q00722 1185 aa5.68□□□□□ -1.5
SNRNP48-202ENST00000496946 KHSRPQ92945 711 aaKnown RBP eCLIP5.67□□□□□ -1.51e-10■■■■□ 20.5
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms