RNA–Protein interactions for RNA: ENST00000494618.1

NCL-210, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 910 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-210ENST00000494618 EVX2Q03828 476 aa15.12■□□□□ 0.01
NCL-210ENST00000494618 CCDC61Q9Y6R9 512 aa15.08■□□□□ 0
NCL-210ENST00000494618 ZNF579Q8NAF0 562 aaKnown RBP15.07■□□□□ 0
NCL-210ENST00000494618 CLCN6P51797 869 aa15.03■□□□□ -0
NCL-210ENST00000494618 TRIM41Q8WV44 630 aa15.02■□□□□ -0
NCL-210ENST00000494618 SP7Q8TDD2 431 aaPredicted RBP15□□□□□ -0.01
NCL-210ENST00000494618 PHF12Q96QT6 1004 aa14.99□□□□□ -0.01
NCL-210ENST00000494618 PYGBP11216 843 aa14.98□□□□□ -0.01
NCL-210ENST00000494618 CHRM1P11229 460 aaPredicted RBP14.94□□□□□ -0.02
NCL-210ENST00000494618 AMER1Q5JTC6 1135 aaPredicted RBP14.94□□□□□ -0.02
NCL-210ENST00000494618 KIF12Q96FN5 646 aa14.94□□□□□ -0.02
NCL-210ENST00000494618 SGIP1Q9BQI5 828 aa14.91□□□□□ -0.02
NCL-210ENST00000494618 MAP3K13O43283 966 aa14.9□□□□□ -0.02
NCL-210ENST00000494618 ECM2O94769 699 aaPredicted RBP14.9□□□□□ -0.02
NCL-210ENST00000494618 PKD2Q13563 968 aa14.9□□□□□ -0.02
NCL-210ENST00000494618 GABBR2O75899 941 aa14.89□□□□□ -0.03
NCL-210ENST00000494618 PCDHB13Q9Y5F0 798 aa14.89□□□□□ -0.03
NCL-210ENST00000494618 MS4A3Q96HJ5 214 aa14.83□□□□□ -0.04
NCL-210ENST00000494618 ZNF467Q7Z7K2 595 aaPredicted RBP14.82□□□□□ -0.04
NCL-210ENST00000494618 GALR2O43603 387 aaPredicted RBP14.81□□□□□ -0.04
NCL-210ENST00000494618 RTN4Q9NQC3 1192 aaKnown RBP14.79□□□□□ -0.04
NCL-210ENST00000494618 IFNL1Q8IU54 200 aa14.78□□□□□ -0.04
NCL-210ENST00000494618 PCDHB8Q9UN66 801 aa14.76□□□□□ -0.05
NCL-210ENST00000494618 TAOK2Q9UL54 1235 aa14.74□□□□□ -0.05
NCL-210ENST00000494618 RIOK3O14730 519 aaKnown RBP14.73□□□□□ -0.05
NCL-210ENST00000494618 DCBLD2Q96PD2 775 aa14.72□□□□□ -0.05
NCL-210ENST00000494618 RGL2O15211 777 aa14.69□□□□□ -0.06
NCL-210ENST00000494618 RNF25Q96BH1 459 aaPredicted RBP14.68□□□□□ -0.06
NCL-210ENST00000494618 TIE1P35590 1138 aa14.67□□□□□ -0.06
NCL-210ENST00000494618 VGFO15240 615 aaPredicted RBP14.66□□□□□ -0.06
NCL-210ENST00000494618 PDAP1Q13442 181 aaKnown RBP14.66□□□□□ -0.06
NCL-210ENST00000494618 TRPC6Q9Y210 931 aa14.64□□□□□ -0.07
NCL-210ENST00000494618 PSEN1P49768 467 aa14.63□□□□□ -0.07
NCL-210ENST00000494618 TMEM106CQ9BVX2 250 aa14.61□□□□□ -0.07
NCL-210ENST00000494618 BMP2KQ9NSY1 1161 aaPredicted RBP14.6□□□□□ -0.07
NCL-210ENST00000494618 DCAF8L2P0C7V8 631 aa14.59□□□□□ -0.07
NCL-210ENST00000494618 TTLL13PA6NNM8 815 aa14.58□□□□□ -0.08
NCL-210ENST00000494618 ASTLQ6HA08 431 aaPredicted RBP14.58□□□□□ -0.08
NCL-210ENST00000494618 ATMINO43313 823 aaPredicted RBP14.56□□□□□ -0.08
NCL-210ENST00000494618 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.55□□□□□ -0.08
NCL-210ENST00000494618 ZFP91Q96JP5 570 aaPredicted RBP14.55□□□□□ -0.08
NCL-210ENST00000494618 POTEIP0CG38 1075 aa14.52□□□□□ -0.09
NCL-210ENST00000494618 ATN1P54259 1190 aaPredicted RBP14.52□□□□□ -0.09
NCL-210ENST00000494618 GOLGA2Q08379 1002 aa14.52□□□□□ -0.09
NCL-210ENST00000494618 STK25O00506 426 aa14.5□□□□□ -0.09
NCL-210ENST00000494618 TRIM35Q9UPQ4 493 aa14.5□□□□□ -0.09
NCL-210ENST00000494618 BCL11BQ9C0K0 894 aaPredicted RBP14.47□□□□□ -0.09
NCL-210ENST00000494618 STK24Q9Y6E0 443 aa14.47□□□□□ -0.09
NCL-210ENST00000494618 CHGAP10645 457 aaKnown RBP14.45□□□□□ -0.1
NCL-210ENST00000494618 CABP2Q9NPB3 220 aa14.45□□□□□ -0.1
NCL-210ENST00000494618 MKRN3Q13064 507 aaKnown RBP14.43□□□□□ -0.1
NCL-210ENST00000494618 PELP1Q8IZL8 1130 aaKnown RBP14.43□□□□□ -0.1
NCL-210ENST00000494618 SLC39A7Q92504 469 aa14.43□□□□□ -0.1
NCL-210ENST00000494618 C7P10643 843 aa14.41□□□□□ -0.1
NCL-210ENST00000494618 HS6ST3Q8IZP7 471 aa14.41□□□□□ -0.1
NCL-210ENST00000494618 IER5LQ5T953 404 aa14.4□□□□□ -0.1
NCL-210ENST00000494618 EFCAB3Q8N7B9 438 aa14.35□□□□□ -0.11
NCL-210ENST00000494618 METRNQ9UJH8 293 aa14.35□□□□□ -0.11
NCL-210ENST00000494618 SEC24BO95487 1268 aa14.34□□□□□ -0.11
NCL-210ENST00000494618 SOX12O15370 315 aa14.32□□□□□ -0.12
NCL-210ENST00000494618 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.29□□□□□ -0.126e-20■■■■■ 28.7
NCL-210ENST00000494618 PLCG2P16885 1265 aa14.28□□□□□ -0.12
NCL-210ENST00000494618 DNAJC5Q9H3Z4 198 aa14.28□□□□□ -0.12
NCL-210ENST00000494618 OCEL1Q9H607 264 aa14.28□□□□□ -0.12
NCL-210ENST00000494618 IRX5P78411 483 aaPredicted RBP14.27□□□□□ -0.13
NCL-210ENST00000494618 NLRP6P59044 892 aa14.24□□□□□ -0.13
NCL-210ENST00000494618 BBXQ8WY36 941 aaPredicted RBP14.22□□□□□ -0.13
NCL-210ENST00000494618 COLQQ9Y215 455 aaPredicted RBP14.22□□□□□ -0.13
NCL-210ENST00000494618 RYDENQ9NUL5 291 aaKnown RBP14.2□□□□□ -0.14
NCL-210ENST00000494618 PHF8Q9UPP1 1060 aa14.2□□□□□ -0.14
NCL-210ENST00000494618 ILDR1Q86SU0 546 aaPredicted RBP14.19□□□□□ -0.14
NCL-210ENST00000494618 MFRPQ9BY79 579 aa14.19□□□□□ -0.14
NCL-210ENST00000494618 POTEFA5A3E0 1075 aa14.18□□□□□ -0.14
NCL-210ENST00000494618 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.18□□□□□ -0.14
NCL-210ENST00000494618 PDCD7Q8N8D1 485 aaKnown RBP14.16□□□□□ -0.14
NCL-210ENST00000494618 NKX1-1Q15270 411 aaPredicted RBP14.15□□□□□ -0.14
NCL-210ENST00000494618 FBXO22Q8NEZ5 403 aa14.13□□□□□ -0.15
NCL-210ENST00000494618 G3V3G9 751 aa14.12□□□□□ -0.15
NCL-210ENST00000494618 L3MBTL3Q96JM7 780 aaPredicted RBP14.12□□□□□ -0.15
NCL-210ENST00000494618 LHX8Q68G74 356 aa14.09□□□□□ -0.15
NCL-210ENST00000494618 DPY19L2Q6NUT2 758 aa14.09□□□□□ -0.15
NCL-210ENST00000494618 MS4A4AQ96JQ5 239 aa14.09□□□□□ -0.15
NCL-210ENST00000494618 POTEB2H3BUK9 544 aa14.06□□□□□ -0.16
NCL-210ENST00000494618 GTPBP6O43824 516 aaPredicted RBP14.05□□□□□ -0.16
NCL-210ENST00000494618 MAMSTRQ6ZN01 415 aa14.05□□□□□ -0.16
NCL-210ENST00000494618 SPRYD3Q8NCJ5 442 aa14.05□□□□□ -0.16
NCL-210ENST00000494618 BOLA1Q9Y3E2 137 aa14.04□□□□□ -0.16
NCL-210ENST00000494618 SCUBE2Q9NQ36 999 aa14.01□□□□□ -0.17
NCL-210ENST00000494618 PAXIP1Q6ZW49 1069 aaPredicted RBP14□□□□□ -0.17
NCL-210ENST00000494618 CFAP44Q96MT7 982 aa14□□□□□ -0.17
NCL-210ENST00000494618 C3orf67Q6ZVT6 689 aa13.98□□□□□ -0.17
NCL-210ENST00000494618 PPP1R37O75864 691 aa13.97□□□□□ -0.17
NCL-210ENST00000494618 POTEJP0CG39 1038 aa13.97□□□□□ -0.17
NCL-210ENST00000494618 MICALL2Q8IY33 904 aa13.96□□□□□ -0.17
NCL-210ENST00000494618 TMEM121BQ9BXQ6 578 aaPredicted RBP13.95□□□□□ -0.18
NCL-210ENST00000494618 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.95□□□□□ -0.18
NCL-210ENST00000494618 OTUD5Q96G74 571 aa13.88□□□□□ -0.19
NCL-210ENST00000494618 PLCB2Q00722 1185 aa13.84□□□□□ -0.19
NCL-210ENST00000494618 SLAIN1Q8ND83 568 aa13.84□□□□□ -0.19
NCL-210ENST00000494618 TMC2Q8TDI7 906 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms