RNA–Protein interactions for RNA: ENST00000494195.1

HMGB3P14-201, Transcript of high mobility group box 3 pseudogene 14, humanhuman

BASIC

Gene HMGB3P14, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P14-201ENST00000494195 C19orf67A6NJJ6 358 aa19.85■□□□□ 0.77
HMGB3P14-201ENST00000494195 TRIM41Q8WV44 630 aa19.82■□□□□ 0.76
HMGB3P14-201ENST00000494195 HAX1O00165 279 aa19.78■□□□□ 0.76
HMGB3P14-201ENST00000494195 ECM2O94769 699 aaPredicted RBP19.77■□□□□ 0.76
HMGB3P14-201ENST00000494195 ZRANB1Q9UGI0 708 aa19.76■□□□□ 0.75
HMGB3P14-201ENST00000494195 CCDC61Q9Y6R9 512 aa19.75■□□□□ 0.75
HMGB3P14-201ENST00000494195 CHRM1P11229 460 aaPredicted RBP19.68■□□□□ 0.74
HMGB3P14-201ENST00000494195 PYGBP11216 843 aa19.66■□□□□ 0.74
HMGB3P14-201ENST00000494195 ZNF579Q8NAF0 562 aaKnown RBP19.63■□□□□ 0.73
HMGB3P14-201ENST00000494195 EVX2Q03828 476 aa19.59■□□□□ 0.73
HMGB3P14-201ENST00000494195 PHF12Q96QT6 1004 aa19.57■□□□□ 0.72
HMGB3P14-201ENST00000494195 RGL2O15211 777 aa19.56■□□□□ 0.72
HMGB3P14-201ENST00000494195 KIF12Q96FN5 646 aa19.54■□□□□ 0.72
HMGB3P14-201ENST00000494195 RNF25Q96BH1 459 aaPredicted RBP19.51■□□□□ 0.71
HMGB3P14-201ENST00000494195 MAP3K13O43283 966 aa19.49■□□□□ 0.71
HMGB3P14-201ENST00000494195 SGIP1Q9BQI5 828 aa19.49■□□□□ 0.71
HMGB3P14-201ENST00000494195 RIOK3O14730 519 aaKnown RBP19.47■□□□□ 0.71
HMGB3P14-201ENST00000494195 PCDHB13Q9Y5F0 798 aa19.47■□□□□ 0.71
HMGB3P14-201ENST00000494195 ZNF467Q7Z7K2 595 aaPredicted RBP19.45■□□□□ 0.7
HMGB3P14-201ENST00000494195 DCAF8L2P0C7V8 631 aa19.43■□□□□ 0.7
HMGB3P14-201ENST00000494195 CLCN6P51797 869 aa19.41■□□□□ 0.7
HMGB3P14-201ENST00000494195 TAOK2Q9UL54 1235 aa19.39■□□□□ 0.69
HMGB3P14-201ENST00000494195 IFNL1Q8IU54 200 aa19.38■□□□□ 0.69
HMGB3P14-201ENST00000494195 PCDHB8Q9UN66 801 aa19.38■□□□□ 0.69
HMGB3P14-201ENST00000494195 MS4A3Q96HJ5 214 aa19.36■□□□□ 0.69
HMGB3P14-201ENST00000494195 VGFO15240 615 aaPredicted RBP19.35■□□□□ 0.69
HMGB3P14-201ENST00000494195 PDAP1Q13442 181 aaKnown RBP19.28■□□□□ 0.68
HMGB3P14-201ENST00000494195 GALR2O43603 387 aaPredicted RBP19.27■□□□□ 0.68
HMGB3P14-201ENST00000494195 GABBR2O75899 941 aa19.25■□□□□ 0.67
HMGB3P14-201ENST00000494195 SP7Q8TDD2 431 aaPredicted RBP19.25■□□□□ 0.67
HMGB3P14-201ENST00000494195 PSEN1P49768 467 aa19.23■□□□□ 0.67
HMGB3P14-201ENST00000494195 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.22■□□□□ 0.67
HMGB3P14-201ENST00000494195 ZFP91Q96JP5 570 aaPredicted RBP19.22■□□□□ 0.67
HMGB3P14-201ENST00000494195 CHGAP10645 457 aaKnown RBP19.2■□□□□ 0.66
HMGB3P14-201ENST00000494195 HS6ST3Q8IZP7 471 aa19.18■□□□□ 0.66
HMGB3P14-201ENST00000494195 TRPC6Q9Y210 931 aa19.18■□□□□ 0.66
HMGB3P14-201ENST00000494195 STK25O00506 426 aa19.16■□□□□ 0.66
HMGB3P14-201ENST00000494195 TIE1P35590 1138 aa19.14■□□□□ 0.65
HMGB3P14-201ENST00000494195 BCL11BQ9C0K0 894 aaPredicted RBP19.12■□□□□ 0.65
HMGB3P14-201ENST00000494195 STK24Q9Y6E0 443 aa19.1■□□□□ 0.65
HMGB3P14-201ENST00000494195 TMEM106CQ9BVX2 250 aa19.09■□□□□ 0.65
HMGB3P14-201ENST00000494195 BMP2KQ9NSY1 1161 aaPredicted RBP19.06■□□□□ 0.64
HMGB3P14-201ENST00000494195 TTLL13PA6NNM8 815 aa19.04■□□□□ 0.64
HMGB3P14-201ENST00000494195 DNAJC5Q9H3Z4 198 aa19.02■□□□□ 0.64
HMGB3P14-201ENST00000494195 BBXQ8WY36 941 aaPredicted RBP19.01■□□□□ 0.63
HMGB3P14-201ENST00000494195 DCBLD2Q96PD2 775 aa19■□□□□ 0.63
HMGB3P14-201ENST00000494195 CABP2Q9NPB3 220 aa18.98■□□□□ 0.63
HMGB3P14-201ENST00000494195 ASTLQ6HA08 431 aaPredicted RBP18.97■□□□□ 0.63
HMGB3P14-201ENST00000494195 ATMINO43313 823 aaPredicted RBP18.96■□□□□ 0.63
HMGB3P14-201ENST00000494195 ATN1P54259 1190 aaPredicted RBP18.93■□□□□ 0.62
HMGB3P14-201ENST00000494195 GOLGA2Q08379 1002 aa18.92■□□□□ 0.62
HMGB3P14-201ENST00000494195 TRIM35Q9UPQ4 493 aa18.92■□□□□ 0.62
HMGB3P14-201ENST00000494195 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.91■□□□□ 0.62
HMGB3P14-201ENST00000494195 NKX1-1Q15270 411 aaPredicted RBP18.88■□□□□ 0.61
HMGB3P14-201ENST00000494195 EFCAB3Q8N7B9 438 aa18.88■□□□□ 0.61
HMGB3P14-201ENST00000494195 POTEIP0CG38 1075 aa18.84■□□□□ 0.61
HMGB3P14-201ENST00000494195 MKRN3Q13064 507 aaKnown RBP18.84■□□□□ 0.61
HMGB3P14-201ENST00000494195 SOX12O15370 315 aa18.82■□□□□ 0.6
HMGB3P14-201ENST00000494195 PELP1Q8IZL8 1130 aaKnown RBP18.79■□□□□ 0.6
HMGB3P14-201ENST00000494195 IER5LQ5T953 404 aa18.76■□□□□ 0.59
HMGB3P14-201ENST00000494195 MFRPQ9BY79 579 aa18.76■□□□□ 0.59
HMGB3P14-201ENST00000494195 RYDENQ9NUL5 291 aaKnown RBP18.75■□□□□ 0.59
HMGB3P14-201ENST00000494195 SPRYD3Q8NCJ5 442 aa18.74■□□□□ 0.59
HMGB3P14-201ENST00000494195 NLRP6P59044 892 aa18.73■□□□□ 0.59
HMGB3P14-201ENST00000494195 PAXIP1Q6ZW49 1069 aaPredicted RBP18.73■□□□□ 0.59
HMGB3P14-201ENST00000494195 PHF8Q9UPP1 1060 aa18.73■□□□□ 0.59
HMGB3P14-201ENST00000494195 SLC39A7Q92504 469 aa18.72■□□□□ 0.59
HMGB3P14-201ENST00000494195 GTPBP6O43824 516 aaPredicted RBP18.71■□□□□ 0.59
HMGB3P14-201ENST00000494195 PLCB2Q00722 1185 aa18.71■□□□□ 0.59
HMGB3P14-201ENST00000494195 CFAP44Q96MT7 982 aa18.7■□□□□ 0.58
HMGB3P14-201ENST00000494195 FBXO22Q8NEZ5 403 aa18.69■□□□□ 0.58
HMGB3P14-201ENST00000494195 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.69■□□□□ 0.58
HMGB3P14-201ENST00000494195 C7P10643 843 aa18.67■□□□□ 0.58
HMGB3P14-201ENST00000494195 ILDR1Q86SU0 546 aaPredicted RBP18.67■□□□□ 0.58
HMGB3P14-201ENST00000494195 IRX5P78411 483 aaPredicted RBP18.66■□□□□ 0.58
HMGB3P14-201ENST00000494195 METRNQ9UJH8 293 aa18.63■□□□□ 0.57
HMGB3P14-201ENST00000494195 OCEL1Q9H607 264 aa18.62■□□□□ 0.57
HMGB3P14-201ENST00000494195 MS4A4AQ96JQ5 239 aa18.61■□□□□ 0.57
HMGB3P14-201ENST00000494195 SEC24BO95487 1268 aa18.59■□□□□ 0.57
HMGB3P14-201ENST00000494195 PLCG2P16885 1265 aa18.59■□□□□ 0.57
HMGB3P14-201ENST00000494195 PDCD7Q8N8D1 485 aaKnown RBP18.57■□□□□ 0.56
HMGB3P14-201ENST00000494195 COLQQ9Y215 455 aaPredicted RBP18.55■□□□□ 0.56
HMGB3P14-201ENST00000494195 POTEFA5A3E0 1075 aa18.52■□□□□ 0.56
HMGB3P14-201ENST00000494195 PPP1R37O75864 691 aa18.49■□□□□ 0.55
HMGB3P14-201ENST00000494195 DPY19L2Q6NUT2 758 aa18.48■□□□□ 0.55
HMGB3P14-201ENST00000494195 HAP1P54257 671 aaPredicted RBP18.42■□□□□ 0.54
HMGB3P14-201ENST00000494195 L3MBTL3Q96JM7 780 aaPredicted RBP18.4■□□□□ 0.54
HMGB3P14-201ENST00000494195 BOLA1Q9Y3E2 137 aa18.37■□□□□ 0.53
HMGB3P14-201ENST00000494195 G3V3G9 751 aa18.36■□□□□ 0.53
HMGB3P14-201ENST00000494195 TSHZ2Q9NRE2 1034 aa18.36■□□□□ 0.53
HMGB3P14-201ENST00000494195 MICALL2Q8IY33 904 aa18.34■□□□□ 0.53
HMGB3P14-201ENST00000494195 SLC24A1O60721 1099 aa18.33■□□□□ 0.52
HMGB3P14-201ENST00000494195 TMEM121BQ9BXQ6 578 aaPredicted RBP18.31■□□□□ 0.52
HMGB3P14-201ENST00000494195 POTEB2H3BUK9 544 aa18.24■□□□□ 0.51
HMGB3P14-201ENST00000494195 CADPS2Q86UW7 1296 aa18.23■□□□□ 0.51
HMGB3P14-201ENST00000494195 C3orf67Q6ZVT6 689 aa18.19■□□□□ 0.5
HMGB3P14-201ENST00000494195 POTEJP0CG39 1038 aa18.18■□□□□ 0.5
HMGB3P14-201ENST00000494195 VSIG10Q8N0Z9 540 aa18.16■□□□□ 0.5
HMGB3P14-201ENST00000494195 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.12■□□□□ 0.49
HMGB3P14-201ENST00000494195 MAMSTRQ6ZN01 415 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms