RNA–Protein interactions for RNA: ENST00000494051.1

SSB-212, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 392 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-212ENST00000494051 FAM212AQ96EL1 285 aa15.57■□□□□ 0.08
SSB-212ENST00000494051 CIZ1Q9ULV3 898 aaPredicted RBP15.56■□□□□ 0.08
SSB-212ENST00000494051 PAK3O75914 559 aaPredicted RBP15.55■□□□□ 0.08
SSB-212ENST00000494051 GSE1Q14687 1217 aa15.51■□□□□ 0.07
SSB-212ENST00000494051 ZRANB1Q9UGI0 708 aa15.49■□□□□ 0.07
SSB-212ENST00000494051 AMER1Q5JTC6 1135 aaPredicted RBP15.46■□□□□ 0.07
SSB-212ENST00000494051 RTN4Q9NQC3 1192 aaKnown RBP15.44■□□□□ 0.06
SSB-212ENST00000494051 POTEIP0CG38 1075 aa15.43■□□□□ 0.06
SSB-212ENST00000494051 CCDC61Q9Y6R9 512 aa15.4■□□□□ 0.06
SSB-212ENST00000494051 PKD2Q13563 968 aa15.39■□□□□ 0.05
SSB-212ENST00000494051 PYGBP11216 843 aa15.36■□□□□ 0.05
SSB-212ENST00000494051 ECM2O94769 699 aaPredicted RBP15.34■□□□□ 0.05
SSB-212ENST00000494051 PHF12Q96QT6 1004 aa15.34■□□□□ 0.05
SSB-212ENST00000494051 ZNF579Q8NAF0 562 aaKnown RBP15.33■□□□□ 0.04
SSB-212ENST00000494051 TRIM41Q8WV44 630 aa15.32■□□□□ 0.04
SSB-212ENST00000494051 POTEMA6NI47 508 aa15.28■□□□□ 0.04
SSB-212ENST00000494051 CHRM1P11229 460 aaPredicted RBP15.26■□□□□ 0.03
SSB-212ENST00000494051 KIF12Q96FN5 646 aa15.26■□□□□ 0.03
SSB-212ENST00000494051 MAP3K13O43283 966 aa15.23■□□□□ 0.03
SSB-212ENST00000494051 PCDHB13Q9Y5F0 798 aa15.2■□□□□ 0.02
SSB-212ENST00000494051 POTEGQ6S5H5 508 aa15.18■□□□□ 0.02
SSB-212ENST00000494051 RGL2O15211 777 aa15.17■□□□□ 0.02
SSB-212ENST00000494051 MS4A3Q96HJ5 214 aa15.14■□□□□ 0.01
SSB-212ENST00000494051 SGIP1Q9BQI5 828 aa15.14■□□□□ 0.01
SSB-212ENST00000494051 PCDHB8Q9UN66 801 aa15.14■□□□□ 0.01
SSB-212ENST00000494051 CLCN6P51797 869 aa15.13■□□□□ 0.01
SSB-212ENST00000494051 ZNF467Q7Z7K2 595 aaPredicted RBP15.13■□□□□ 0.01
SSB-212ENST00000494051 IFNL1Q8IU54 200 aa15.13■□□□□ 0.01
SSB-212ENST00000494051 RNF25Q96BH1 459 aaPredicted RBP15.13■□□□□ 0.01
SSB-212ENST00000494051 GALR2O43603 387 aaPredicted RBP15.12■□□□□ 0.01
SSB-212ENST00000494051 PCDH10Q9P2E7 1040 aa15.12■□□□□ 0.01
SSB-212ENST00000494051 RIOK3O14730 519 aaKnown RBP15.11■□□□□ 0.01
SSB-212ENST00000494051 OTUD5Q96G74 571 aa15.11■□□□□ 0.01
SSB-212ENST00000494051 DCAF8L2P0C7V8 631 aa15.09■□□□□ 0.01
SSB-212ENST00000494051 DCBLD2Q96PD2 775 aa15.05■□□□□ -0
SSB-212ENST00000494051 TRPC6Q9Y210 931 aa15.02■□□□□ -0
SSB-212ENST00000494051 TAOK2Q9UL54 1235 aa15.01□□□□□ -0.01
SSB-212ENST00000494051 VGFO15240 615 aaPredicted RBP15□□□□□ -0.01
SSB-212ENST00000494051 PDAP1Q13442 181 aaKnown RBP15□□□□□ -0.01
SSB-212ENST00000494051 PSEN1P49768 467 aa14.99□□□□□ -0.01
SSB-212ENST00000494051 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.94□□□□□ -0.02
SSB-212ENST00000494051 ZFP91Q96JP5 570 aaPredicted RBP14.94□□□□□ -0.02
SSB-212ENST00000494051 TMEM106CQ9BVX2 250 aa14.93□□□□□ -0.02
SSB-212ENST00000494051 TIE1P35590 1138 aa14.92□□□□□ -0.02
SSB-212ENST00000494051 BMP2KQ9NSY1 1161 aaPredicted RBP14.91□□□□□ -0.02
SSB-212ENST00000494051 STK25O00506 426 aa14.9□□□□□ -0.02
SSB-212ENST00000494051 CHGAP10645 457 aaKnown RBP14.9□□□□□ -0.02
SSB-212ENST00000494051 POTEB2H3BUK9 544 aa14.89□□□□□ -0.03
SSB-212ENST00000494051 TTLL13PA6NNM8 815 aa14.88□□□□□ -0.03
SSB-212ENST00000494051 BCL11BQ9C0K0 894 aaPredicted RBP14.87□□□□□ -0.03
SSB-212ENST00000494051 STK24Q9Y6E0 443 aa14.86□□□□□ -0.03
SSB-212ENST00000494051 ATMINO43313 823 aaPredicted RBP14.84□□□□□ -0.03
SSB-212ENST00000494051 ATN1P54259 1190 aaPredicted RBP14.82□□□□□ -0.04
SSB-212ENST00000494051 ASTLQ6HA08 431 aaPredicted RBP14.82□□□□□ -0.04
SSB-212ENST00000494051 HS6ST3Q8IZP7 471 aa14.82□□□□□ -0.04
SSB-212ENST00000494051 CABP2Q9NPB3 220 aa14.81□□□□□ -0.04
SSB-212ENST00000494051 TRIM35Q9UPQ4 493 aa14.8□□□□□ -0.04
SSB-212ENST00000494051 GOLGA2Q08379 1002 aa14.79□□□□□ -0.04
SSB-212ENST00000494051 PELP1Q8IZL8 1130 aaKnown RBP14.74□□□□□ -0.05
SSB-212ENST00000494051 MKRN3Q13064 507 aaKnown RBP14.72□□□□□ -0.05
SSB-212ENST00000494051 EFCAB3Q8N7B9 438 aa14.72□□□□□ -0.05
SSB-212ENST00000494051 BBXQ8WY36 941 aaPredicted RBP14.66□□□□□ -0.06
SSB-212ENST00000494051 LCE2DQ5TA82 110 aaPredicted RBP14.65□□□□□ -0.06
SSB-212ENST00000494051 SLC39A7Q92504 469 aa14.65□□□□□ -0.06
SSB-212ENST00000494051 DNAJC5Q9H3Z4 198 aa14.63□□□□□ -0.07
SSB-212ENST00000494051 SOX12O15370 315 aa14.62□□□□□ -0.07
SSB-212ENST00000494051 C7P10643 843 aa14.62□□□□□ -0.07
SSB-212ENST00000494051 NKX1-1Q15270 411 aaPredicted RBP14.62□□□□□ -0.07
SSB-212ENST00000494051 IER5LQ5T953 404 aa14.62□□□□□ -0.07
SSB-212ENST00000494051 METRNQ9UJH8 293 aa14.61□□□□□ -0.07
SSB-212ENST00000494051 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.6□□□□□ -0.073e-11■■■■□ 24.9
SSB-212ENST00000494051 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.6□□□□□ -0.07
SSB-212ENST00000494051 SEC24BO95487 1268 aa14.59□□□□□ -0.07
SSB-212ENST00000494051 PHF8Q9UPP1 1060 aa14.59□□□□□ -0.07
SSB-212ENST00000494051 MFRPQ9BY79 579 aa14.57□□□□□ -0.08
SSB-212ENST00000494051 NLRP6P59044 892 aa14.56□□□□□ -0.08
SSB-212ENST00000494051 PLCG2P16885 1265 aa14.55□□□□□ -0.08
SSB-212ENST00000494051 IRX5P78411 483 aaPredicted RBP14.55□□□□□ -0.08
SSB-212ENST00000494051 OCEL1Q9H607 264 aa14.55□□□□□ -0.08
SSB-212ENST00000494051 COLQQ9Y215 455 aaPredicted RBP14.54□□□□□ -0.08
SSB-212ENST00000494051 FBXO22Q8NEZ5 403 aa14.51□□□□□ -0.09
SSB-212ENST00000494051 FAM163AQ96GL9 167 aaPredicted RBP14.5□□□□□ -0.09
SSB-212ENST00000494051 POTEFA5A3E0 1075 aa14.49□□□□□ -0.09
SSB-212ENST00000494051 PAXIP1Q6ZW49 1069 aaPredicted RBP14.49□□□□□ -0.09
SSB-212ENST00000494051 ILDR1Q86SU0 546 aaPredicted RBP14.49□□□□□ -0.09
SSB-212ENST00000494051 PDCD7Q8N8D1 485 aaKnown RBP14.49□□□□□ -0.09
SSB-212ENST00000494051 RYDENQ9NUL5 291 aaKnown RBP14.49□□□□□ -0.09
SSB-212ENST00000494051 GTPBP6O43824 516 aaPredicted RBP14.48□□□□□ -0.09
SSB-212ENST00000494051 SPRYD3Q8NCJ5 442 aa14.48□□□□□ -0.09
SSB-212ENST00000494051 MS4A4AQ96JQ5 239 aa14.48□□□□□ -0.09
SSB-212ENST00000494051 CFAP44Q96MT7 982 aa14.48□□□□□ -0.09
SSB-212ENST00000494051 POTEJP0CG39 1038 aa14.46□□□□□ -0.09
SSB-212ENST00000494051 DPY19L2Q6NUT2 758 aa14.46□□□□□ -0.09
SSB-212ENST00000494051 MAMSTRQ6ZN01 415 aa14.42□□□□□ -0.1
SSB-212ENST00000494051 PPP1R37O75864 691 aa14.39□□□□□ -0.11
SSB-212ENST00000494051 PLCB2Q00722 1185 aa14.37□□□□□ -0.11
SSB-212ENST00000494051 G3V3G9 751 aa14.36□□□□□ -0.11
SSB-212ENST00000494051 L3MBTL3Q96JM7 780 aaPredicted RBP14.36□□□□□ -0.11
SSB-212ENST00000494051 CDAN1Q8IWY9 1227 aa14.35□□□□□ -0.11
SSB-212ENST00000494051 BOLA1Q9Y3E2 137 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms