RNA–Protein interactions for RNA: ENST00000489836.1

AC055748.1-201, humanhuman

BASIC

Gene AC055748.1, Length 959 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055748.1-201ENST00000489836 SMARCA4P51532 1647 aa18.84■□□□□ 0.61
AC055748.1-201ENST00000489836 PLCD3Q8N3E9 789 aa18.83■□□□□ 0.6
AC055748.1-201ENST00000489836 CD44P16070 742 aaKnown RBP18.82■□□□□ 0.6
AC055748.1-201ENST00000489836 NCAPD3P42695 1498 aa18.82■□□□□ 0.6
AC055748.1-201ENST00000489836 BAZ1AQ9NRL2 1556 aaPredicted RBP18.81■□□□□ 0.6
AC055748.1-201ENST00000489836 ATAD2BQ9ULI0 1458 aa18.8■□□□□ 0.6
AC055748.1-201ENST00000489836 NPM1P06748 294 aaKnown RBP eCLIP18.76■□□□□ 0.59
AC055748.1-201ENST00000489836 PLEKHG5O94827 1062 aa18.75■□□□□ 0.59
AC055748.1-201ENST00000489836 SMARCA2P51531 1590 aa18.74■□□□□ 0.59
AC055748.1-201ENST00000489836 MROH2BQ7Z745 1585 aa18.72■□□□□ 0.59
AC055748.1-201ENST00000489836 PEG3Q9GZU2 1588 aa18.7■□□□□ 0.58
AC055748.1-201ENST00000489836 HMGXB3Q12766 1538 aa18.68■□□□□ 0.58
AC055748.1-201ENST00000489836 VASPP50552 380 aaPredicted RBP18.67■□□□□ 0.58
AC055748.1-201ENST00000489836 ZRANB1Q9UGI0 708 aa18.66■□□□□ 0.58
AC055748.1-201ENST00000489836 BAZ1BQ9UIG0 1483 aaKnown RBP18.59■□□□□ 0.57
AC055748.1-201ENST00000489836 GABBR2O75899 941 aa18.55■□□□□ 0.56
AC055748.1-201ENST00000489836 PAK3O75914 559 aaPredicted RBP18.55■□□□□ 0.56
AC055748.1-201ENST00000489836 TSPYL2Q9H2G4 693 aaPredicted RBP18.54■□□□□ 0.56
AC055748.1-201ENST00000489836 ZBTB47Q9UFB7 747 aaPredicted RBP18.54■□□□□ 0.56
AC055748.1-201ENST00000489836 RASEFQ8IZ41 740 aa18.53■□□□□ 0.56
AC055748.1-201ENST00000489836 ZNF579Q8NAF0 562 aaKnown RBP18.52■□□□□ 0.56
AC055748.1-201ENST00000489836 RSF1Q96T23 1441 aaPredicted RBP18.51■□□□□ 0.55
AC055748.1-201ENST00000489836 PHF12Q96QT6 1004 aa18.49■□□□□ 0.55
AC055748.1-201ENST00000489836 NUBP1P53384 320 aa18.48■□□□□ 0.55
AC055748.1-201ENST00000489836 WIZO95785 1651 aa18.47■□□□□ 0.55
AC055748.1-201ENST00000489836 KLHL34Q8N239 644 aa18.47■□□□□ 0.55
AC055748.1-201ENST00000489836 IFNLR1Q8IU57 520 aaPredicted RBP18.42■□□□□ 0.54
AC055748.1-201ENST00000489836 CCDC61Q9Y6R9 512 aa18.38■□□□□ 0.53
AC055748.1-201ENST00000489836 GALR2O43603 387 aaPredicted RBP18.33■□□□□ 0.52
AC055748.1-201ENST00000489836 NESP48681 1621 aa18.33■□□□□ 0.52
AC055748.1-201ENST00000489836 TOP2AP11388 1531 aaKnown RBP18.3■□□□□ 0.52
AC055748.1-201ENST00000489836 CLCN6P51797 869 aa18.29■□□□□ 0.52
AC055748.1-201ENST00000489836 FAM212AQ96EL1 285 aa18.29■□□□□ 0.52
AC055748.1-201ENST00000489836 LAMC3Q9Y6N6 1575 aa18.28■□□□□ 0.52
AC055748.1-201ENST00000489836 DCAF8Q5TAQ9 597 aa18.26■□□□□ 0.51
AC055748.1-201ENST00000489836 CADPSQ9ULU8 1353 aa18.26■□□□□ 0.51
AC055748.1-201ENST00000489836 MS4A3Q96HJ5 214 aa18.24■□□□□ 0.51
AC055748.1-201ENST00000489836 ERCC6Q03468 1493 aa18.23■□□□□ 0.51
AC055748.1-201ENST00000489836 KIF12Q96FN5 646 aa18.23■□□□□ 0.51
AC055748.1-201ENST00000489836 SPOCK2Q92563 424 aa18.22■□□□□ 0.51
AC055748.1-201ENST00000489836 POTEIP0CG38 1075 aa18.2■□□□□ 0.5
AC055748.1-201ENST00000489836 MAP3K13O43283 966 aa18.19■□□□□ 0.5
AC055748.1-201ENST00000489836 PDS5BQ9NTI5 1447 aa18.17■□□□□ 0.5
AC055748.1-201ENST00000489836 DCBLD2Q96PD2 775 aa18.14■□□□□ 0.49
AC055748.1-201ENST00000489836 CUX2O14529 1486 aa18.14■□□□□ 0.49
AC055748.1-201ENST00000489836 CFTRP13569 1480 aa18.14■□□□□ 0.49
AC055748.1-201ENST00000489836 PYGBP11216 843 aa18.12■□□□□ 0.49
AC055748.1-201ENST00000489836 CCDC88BA6NC98 1476 aa18.11■□□□□ 0.49
AC055748.1-201ENST00000489836 GSE1Q14687 1217 aa18.09■□□□□ 0.49
AC055748.1-201ENST00000489836 TRPC6Q9Y210 931 aa18.08■□□□□ 0.48
AC055748.1-201ENST00000489836 THOC2Q8NI27 1593 aaKnown RBP18.06■□□□□ 0.48
AC055748.1-201ENST00000489836 CIZ1Q9ULV3 898 aaPredicted RBP18.06■□□□□ 0.48
AC055748.1-201ENST00000489836 PCDHB13Q9Y5F0 798 aa18.06■□□□□ 0.48
AC055748.1-201ENST00000489836 KIF21AQ7Z4S6 1674 aa18.06■□□□□ 0.48
AC055748.1-201ENST00000489836 FANCD2Q9BXW9 1451 aa18.01■□□□□ 0.47
AC055748.1-201ENST00000489836 IFNL1Q8IU54 200 aa18■□□□□ 0.47
AC055748.1-201ENST00000489836 MRC2Q9UBG0 1479 aa17.97■□□□□ 0.47
AC055748.1-201ENST00000489836 CEP164Q9UPV0 1460 aa17.97■□□□□ 0.47
AC055748.1-201ENST00000489836 SGIP1Q9BQI5 828 aa17.97■□□□□ 0.47
AC055748.1-201ENST00000489836 PELP1Q8IZL8 1130 aaKnown RBP17.94■□□□□ 0.46
AC055748.1-201ENST00000489836 ATMINO43313 823 aaPredicted RBP17.93■□□□□ 0.46
AC055748.1-201ENST00000489836 WDR62O43379 1518 aa17.93■□□□□ 0.46
AC055748.1-201ENST00000489836 SUPT5HO00267 1087 aaKnown RBP17.92■□□□□ 0.46
AC055748.1-201ENST00000489836 ASTLQ6HA08 431 aaPredicted RBP17.92■□□□□ 0.46
AC055748.1-201ENST00000489836 BMP2KQ9NSY1 1161 aaPredicted RBP17.92■□□□□ 0.46
AC055748.1-201ENST00000489836 PCDHB8Q9UN66 801 aa17.92■□□□□ 0.46
AC055748.1-201ENST00000489836 ATN1P54259 1190 aaPredicted RBP17.88■□□□□ 0.45
AC055748.1-201ENST00000489836 PRDM2Q13029 1718 aa17.87■□□□□ 0.45
AC055748.1-201ENST00000489836 CHRM1P11229 460 aaPredicted RBP17.87■□□□□ 0.45
AC055748.1-201ENST00000489836 TIE1P35590 1138 aa17.86■□□□□ 0.45
AC055748.1-201ENST00000489836 URB2Q14146 1524 aaKnown RBP17.84■□□□□ 0.45
AC055748.1-201ENST00000489836 TTLL13PA6NNM8 815 aa17.83■□□□□ 0.44
AC055748.1-201ENST00000489836 TMEM106CQ9BVX2 250 aa17.78■□□□□ 0.44
AC055748.1-201ENST00000489836 ZNF467Q7Z7K2 595 aaPredicted RBP17.76■□□□□ 0.43
AC055748.1-201ENST00000489836 METRNQ9UJH8 293 aa17.73■□□□□ 0.43
AC055748.1-201ENST00000489836 TRIM35Q9UPQ4 493 aa17.73■□□□□ 0.43
AC055748.1-201ENST00000489836 ABCC8Q09428 1581 aa17.73■□□□□ 0.43
AC055748.1-201ENST00000489836 LHX8Q68G74 356 aa17.72■□□□□ 0.43
AC055748.1-201ENST00000489836 TOPBP1Q92547 1522 aa17.72■□□□□ 0.43
AC055748.1-201ENST00000489836 TRIM41Q8WV44 630 aa17.71■□□□□ 0.43
AC055748.1-201ENST00000489836 SLC39A7Q92504 469 aa17.71■□□□□ 0.43
AC055748.1-201ENST00000489836 DNAJC5Q9H3Z4 198 aa17.68■□□□□ 0.42
AC055748.1-201ENST00000489836 DNMBPQ6XZF7 1577 aa17.67■□□□□ 0.42
AC055748.1-201ENST00000489836 C7P10643 843 aa17.67■□□□□ 0.42
AC055748.1-201ENST00000489836 PSEN1P49768 467 aa17.65■□□□□ 0.42
AC055748.1-201ENST00000489836 POTEB2H3BUK9 544 aa17.64■□□□□ 0.41
AC055748.1-201ENST00000489836 RNF25Q96BH1 459 aaPredicted RBP17.64■□□□□ 0.41
AC055748.1-201ENST00000489836 PKD2Q13563 968 aa17.63■□□□□ 0.41
AC055748.1-201ENST00000489836 IFT140Q96RY7 1462 aa17.63■□□□□ 0.41
AC055748.1-201ENST00000489836 POTEFA5A3E0 1075 aa17.6■□□□□ 0.41
AC055748.1-201ENST00000489836 PDAP1Q13442 181 aaKnown RBP17.6■□□□□ 0.41
AC055748.1-201ENST00000489836 ECM2O94769 699 aaPredicted RBP17.58■□□□□ 0.4
AC055748.1-201ENST00000489836 CUX1P39880 1505 aa17.57■□□□□ 0.4
AC055748.1-201ENST00000489836 POLA1P09884 1462 aaPredicted RBP17.56■□□□□ 0.4
AC055748.1-201ENST00000489836 COLQQ9Y215 455 aaPredicted RBP17.56■□□□□ 0.4
AC055748.1-201ENST00000489836 ZNF608Q9ULD9 1512 aaPredicted RBP17.54■□□□□ 0.4
AC055748.1-201ENST00000489836 RIOK3O14730 519 aaKnown RBP17.54■□□□□ 0.4
AC055748.1-201ENST00000489836 TARBP1Q13395 1621 aaKnown RBP17.53■□□□□ 0.4
AC055748.1-201ENST00000489836 IER5LQ5T953 404 aa17.52■□□□□ 0.4
AC055748.1-201ENST00000489836 SEC24BO95487 1268 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms