RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 GALR2O43603 387 aaPredicted RBP11.21□□□□□ -0.61
SSR1-209ENST00000488834 POTEIP0CG38 1075 aa11.21□□□□□ -0.61
SSR1-209ENST00000488834 CCDC61Q9Y6R9 512 aa11.2□□□□□ -0.62
SSR1-209ENST00000488834 AMER1Q5JTC6 1135 aaPredicted RBP11.16□□□□□ -0.62
SSR1-209ENST00000488834 CIZ1Q9ULV3 898 aaPredicted RBP11.13□□□□□ -0.63
SSR1-209ENST00000488834 FAM212AQ96EL1 285 aa11.12□□□□□ -0.63
SSR1-209ENST00000488834 MS4A3Q96HJ5 214 aa11.12□□□□□ -0.63
SSR1-209ENST00000488834 TRPC6Q9Y210 931 aa11.12□□□□□ -0.63
SSR1-209ENST00000488834 PAK3O75914 559 aaPredicted RBP11.1□□□□□ -0.63
SSR1-209ENST00000488834 DCAF8Q5TAQ9 597 aa11.1□□□□□ -0.63
SSR1-209ENST00000488834 KIF12Q96FN5 646 aa11.09□□□□□ -0.63
SSR1-209ENST00000488834 MAP3K13O43283 966 aa11.07□□□□□ -0.64
SSR1-209ENST00000488834 GSE1Q14687 1217 aa11.07□□□□□ -0.64
SSR1-209ENST00000488834 RTN4Q9NQC3 1192 aaKnown RBP11.07□□□□□ -0.64
SSR1-209ENST00000488834 PELP1Q8IZL8 1130 aaKnown RBP11.03□□□□□ -0.64
SSR1-209ENST00000488834 PYGBP11216 843 aa11□□□□□ -0.65
SSR1-209ENST00000488834 ECM2O94769 699 aaPredicted RBP10.98□□□□□ -0.65
SSR1-209ENST00000488834 IFNL1Q8IU54 200 aa10.97□□□□□ -0.65
SSR1-209ENST00000488834 TRIM41Q8WV44 630 aa10.96□□□□□ -0.65
SSR1-209ENST00000488834 PKD2Q13563 968 aa10.95□□□□□ -0.66
SSR1-209ENST00000488834 BMP2KQ9NSY1 1161 aaPredicted RBP10.93□□□□□ -0.66
SSR1-209ENST00000488834 ATMINO43313 823 aaPredicted RBP10.92□□□□□ -0.66
SSR1-209ENST00000488834 DCBLD2Q96PD2 775 aa10.92□□□□□ -0.66
SSR1-209ENST00000488834 PCDHB13Q9Y5F0 798 aa10.92□□□□□ -0.66
SSR1-209ENST00000488834 PCDHB8Q9UN66 801 aa10.91□□□□□ -0.66
SSR1-209ENST00000488834 CLCN6P51797 869 aa10.9□□□□□ -0.66
SSR1-209ENST00000488834 ATN1P54259 1190 aaPredicted RBP10.9□□□□□ -0.66
SSR1-209ENST00000488834 ASTLQ6HA08 431 aaPredicted RBP10.9□□□□□ -0.66
SSR1-209ENST00000488834 DCAF8L2P0C7V8 631 aa10.89□□□□□ -0.67
SSR1-209ENST00000488834 POTEB2H3BUK9 544 aa10.87□□□□□ -0.67
SSR1-209ENST00000488834 TTLL13PA6NNM8 815 aa10.85□□□□□ -0.67
SSR1-209ENST00000488834 POTEFA5A3E0 1075 aa10.84□□□□□ -0.67
SSR1-209ENST00000488834 CHRM1P11229 460 aaPredicted RBP10.84□□□□□ -0.67
SSR1-209ENST00000488834 RNF25Q96BH1 459 aaPredicted RBP10.82□□□□□ -0.68
SSR1-209ENST00000488834 SGIP1Q9BQI5 828 aa10.81□□□□□ -0.68
SSR1-209ENST00000488834 RGL2O15211 777 aa10.8□□□□□ -0.68
SSR1-209ENST00000488834 POTEJP0CG39 1038 aa10.8□□□□□ -0.68
SSR1-209ENST00000488834 TIE1P35590 1138 aa10.79□□□□□ -0.68
SSR1-209ENST00000488834 ZNF467Q7Z7K2 595 aaPredicted RBP10.79□□□□□ -0.68
SSR1-209ENST00000488834 RIOK3O14730 519 aaKnown RBP10.78□□□□□ -0.68
SSR1-209ENST00000488834 TMEM106CQ9BVX2 250 aa10.78□□□□□ -0.68
SSR1-209ENST00000488834 TAOK2Q9UL54 1235 aa10.78□□□□□ -0.68
SSR1-209ENST00000488834 METRNQ9UJH8 293 aa10.77□□□□□ -0.69
SSR1-209ENST00000488834 LHX8Q68G74 356 aa10.76□□□□□ -0.69
SSR1-209ENST00000488834 COLQQ9Y215 455 aaPredicted RBP10.76□□□□□ -0.69
SSR1-209ENST00000488834 TRIM35Q9UPQ4 493 aa10.75□□□□□ -0.69
SSR1-209ENST00000488834 VGFO15240 615 aaPredicted RBP10.71□□□□□ -0.69
SSR1-209ENST00000488834 PDAP1Q13442 181 aaKnown RBP10.69□□□□□ -0.7
SSR1-209ENST00000488834 PSEN1P49768 467 aa10.68□□□□□ -0.7
SSR1-209ENST00000488834 SLC39A7Q92504 469 aa10.68□□□□□ -0.7
SSR1-209ENST00000488834 C7P10643 843 aa10.66□□□□□ -0.7
SSR1-209ENST00000488834 CHGAP10645 457 aaKnown RBP10.66□□□□□ -0.7
SSR1-209ENST00000488834 OTUD5Q96G74 571 aa10.66□□□□□ -0.7
SSR1-209ENST00000488834 STK25O00506 426 aa10.65□□□□□ -0.7
SSR1-209ENST00000488834 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.64□□□□□ -0.71
SSR1-209ENST00000488834 ZFP91Q96JP5 570 aaPredicted RBP10.64□□□□□ -0.71
SSR1-209ENST00000488834 IRX5P78411 483 aaPredicted RBP10.63□□□□□ -0.71
SSR1-209ENST00000488834 STK24Q9Y6E0 443 aa10.62□□□□□ -0.71
SSR1-209ENST00000488834 BCL11BQ9C0K0 894 aaPredicted RBP10.61□□□□□ -0.71
SSR1-209ENST00000488834 GOLGA2Q08379 1002 aa10.59□□□□□ -0.71
SSR1-209ENST00000488834 HS6ST3Q8IZP7 471 aa10.58□□□□□ -0.72
SSR1-209ENST00000488834 PDCD7Q8N8D1 485 aaKnown RBP10.58□□□□□ -0.72
SSR1-209ENST00000488834 IER5LQ5T953 404 aa10.57□□□□□ -0.72
SSR1-209ENST00000488834 CABP2Q9NPB3 220 aa10.57□□□□□ -0.72
SSR1-209ENST00000488834 DPY19L2Q6NUT2 758 aa10.54□□□□□ -0.72
SSR1-209ENST00000488834 SEC24BO95487 1268 aa10.52□□□□□ -0.73
SSR1-209ENST00000488834 ILDR1Q86SU0 546 aaPredicted RBP10.52□□□□□ -0.73
SSR1-209ENST00000488834 EFCAB3Q8N7B9 438 aa10.52□□□□□ -0.73
SSR1-209ENST00000488834 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.52□□□□□ -0.73
SSR1-209ENST00000488834 MKRN3Q13064 507 aaKnown RBP10.5□□□□□ -0.73
SSR1-209ENST00000488834 BBXQ8WY36 941 aaPredicted RBP10.5□□□□□ -0.73
SSR1-209ENST00000488834 PLCG2P16885 1265 aa10.48□□□□□ -0.73
SSR1-209ENST00000488834 OCEL1Q9H607 264 aa10.48□□□□□ -0.73
SSR1-209ENST00000488834 MS4A4AQ96JQ5 239 aa10.47□□□□□ -0.73
SSR1-209ENST00000488834 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.46□□□□□ -0.731e-14■■■□□ 15.7
SSR1-209ENST00000488834 PHF8Q9UPP1 1060 aa10.43□□□□□ -0.74
SSR1-209ENST00000488834 RYDENQ9NUL5 291 aaKnown RBP10.42□□□□□ -0.74
SSR1-209ENST00000488834 SOX12O15370 315 aa10.41□□□□□ -0.74
SSR1-209ENST00000488834 LCE2DQ5TA82 110 aaPredicted RBP10.41□□□□□ -0.74
SSR1-209ENST00000488834 DNAJC5Q9H3Z4 198 aa10.41□□□□□ -0.74
SSR1-209ENST00000488834 PAXIP1Q6ZW49 1069 aaPredicted RBP10.4□□□□□ -0.74
SSR1-209ENST00000488834 CFAP44Q96MT7 982 aa10.4□□□□□ -0.74
SSR1-209ENST00000488834 NLRP6P59044 892 aa10.39□□□□□ -0.75
SSR1-209ENST00000488834 NKX1-1Q15270 411 aaPredicted RBP10.39□□□□□ -0.75
SSR1-209ENST00000488834 SPRYD3Q8NCJ5 442 aa10.39□□□□□ -0.75
SSR1-209ENST00000488834 MFRPQ9BY79 579 aa10.39□□□□□ -0.75
SSR1-209ENST00000488834 FBXO22Q8NEZ5 403 aa10.38□□□□□ -0.75
SSR1-209ENST00000488834 SCUBE2Q9NQ36 999 aa10.34□□□□□ -0.75
SSR1-209ENST00000488834 PLCB2Q00722 1185 aa10.32□□□□□ -0.76
SSR1-209ENST00000488834 TMEM92Q6UXU6 159 aa10.32□□□□□ -0.76
SSR1-209ENST00000488834 MAMSTRQ6ZN01 415 aa10.32□□□□□ -0.76
SSR1-209ENST00000488834 SLAIN1Q8ND83 568 aa10.31□□□□□ -0.76
SSR1-209ENST00000488834 GTPBP6O43824 516 aaPredicted RBP10.3□□□□□ -0.76
SSR1-209ENST00000488834 TMEM121BQ9BXQ6 578 aaPredicted RBP10.3□□□□□ -0.76
SSR1-209ENST00000488834 G3V3G9 751 aa10.29□□□□□ -0.76
SSR1-209ENST00000488834 PPP1R37O75864 691 aa10.29□□□□□ -0.76
SSR1-209ENST00000488834 BOLA1Q9Y3E2 137 aa10.29□□□□□ -0.76
SSR1-209ENST00000488834 MICALL2Q8IY33 904 aa10.27□□□□□ -0.77
SSR1-209ENST00000488834 HAP1P54257 671 aaPredicted RBP10.24□□□□□ -0.77
SSR1-209ENST00000488834 L3MBTL3Q96JM7 780 aaPredicted RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms