RNA–Protein interactions for RNA: ENST00000488421.1

ATG2B-204, Transcript of autophagy related 2B, humanhuman

TSL 4

Gene ATG2B, Length 522 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG2B-204ENST00000488421 CCDC61Q9Y6R9 512 aa14.03□□□□□ -0.16
ATG2B-204ENST00000488421 TSPYL2Q9H2G4 693 aaPredicted RBP14.01□□□□□ -0.17
ATG2B-204ENST00000488421 METRNQ9UJH8 293 aa13.99□□□□□ -0.17
ATG2B-204ENST00000488421 KIF12Q96FN5 646 aa13.95□□□□□ -0.18
ATG2B-204ENST00000488421 TRPC6Q9Y210 931 aa13.94□□□□□ -0.18
ATG2B-204ENST00000488421 SLC39A7Q92504 469 aa13.93□□□□□ -0.18
ATG2B-204ENST00000488421 C7P10643 843 aa13.92□□□□□ -0.18
ATG2B-204ENST00000488421 ATN1P54259 1190 aaPredicted RBP13.92□□□□□ -0.18
ATG2B-204ENST00000488421 PLSCR2Q9NRY7 297 aa13.92□□□□□ -0.18
ATG2B-204ENST00000488421 POTEFA5A3E0 1075 aa13.89□□□□□ -0.19
ATG2B-204ENST00000488421 RASEFQ8IZ41 740 aa13.89□□□□□ -0.19
ATG2B-204ENST00000488421 BMP2KQ9NSY1 1161 aaPredicted RBP13.86□□□□□ -0.19
ATG2B-204ENST00000488421 POTEMA6NI47 508 aa13.85□□□□□ -0.19
ATG2B-204ENST00000488421 PLEKHG5O94827 1062 aa13.85□□□□□ -0.19
ATG2B-204ENST00000488421 MAP3K13O43283 966 aa13.84□□□□□ -0.19
ATG2B-204ENST00000488421 FKBP8Q14318 412 aa13.83□□□□□ -0.2
ATG2B-204ENST00000488421 POTEGQ6S5H5 508 aa13.82□□□□□ -0.2
ATG2B-204ENST00000488421 MIER1Q8N108 512 aa13.82□□□□□ -0.2
ATG2B-204ENST00000488421 LCE2DQ5TA82 110 aaPredicted RBP13.81□□□□□ -0.2
ATG2B-204ENST00000488421 TIE1P35590 1138 aa13.75□□□□□ -0.21
ATG2B-204ENST00000488421 MAMSTRQ6ZN01 415 aa13.73□□□□□ -0.21
ATG2B-204ENST00000488421 PLCD3Q8N3E9 789 aa13.73□□□□□ -0.21
ATG2B-204ENST00000488421 COLQQ9Y215 455 aaPredicted RBP13.72□□□□□ -0.21
ATG2B-204ENST00000488421 TTLL13PA6NNM8 815 aa13.71□□□□□ -0.21
ATG2B-204ENST00000488421 NUBP1P53384 320 aa13.71□□□□□ -0.21
ATG2B-204ENST00000488421 SCUBE2Q9NQ36 999 aa13.65□□□□□ -0.22
ATG2B-204ENST00000488421 ZBTB47Q9UFB7 747 aaPredicted RBP13.63□□□□□ -0.23
ATG2B-204ENST00000488421 FAM163AQ96GL9 167 aaPredicted RBP13.62□□□□□ -0.23
ATG2B-204ENST00000488421 SGIP1Q9BQI5 828 aa13.61□□□□□ -0.23
ATG2B-204ENST00000488421 IFNL1Q8IU54 200 aa13.6□□□□□ -0.23
ATG2B-204ENST00000488421 TRIM35Q9UPQ4 493 aa13.6□□□□□ -0.23
ATG2B-204ENST00000488421 PCDHB13Q9Y5F0 798 aa13.6□□□□□ -0.23
ATG2B-204ENST00000488421 FBXO3Q9UK99 471 aa13.57□□□□□ -0.24
ATG2B-204ENST00000488421 PCDH10Q9P2E7 1040 aa13.56□□□□□ -0.24
ATG2B-204ENST00000488421 IER5LQ5T953 404 aa13.54□□□□□ -0.24
ATG2B-204ENST00000488421 SEC24BO95487 1268 aa13.53□□□□□ -0.24
ATG2B-204ENST00000488421 TMEM106CQ9BVX2 250 aa13.48□□□□□ -0.25
ATG2B-204ENST00000488421 FAM212AQ96EL1 285 aa13.47□□□□□ -0.25
ATG2B-204ENST00000488421 IRX5P78411 483 aaPredicted RBP13.43□□□□□ -0.26
ATG2B-204ENST00000488421 PYGBP11216 843 aa13.37□□□□□ -0.27
ATG2B-204ENST00000488421 SLAIN1Q8ND83 568 aa13.37□□□□□ -0.27
ATG2B-204ENST00000488421 PLCG2P16885 1265 aa13.35□□□□□ -0.27
ATG2B-204ENST00000488421 VASPP50552 380 aaPredicted RBP13.35□□□□□ -0.27
ATG2B-204ENST00000488421 KLHL34Q8N239 644 aa13.35□□□□□ -0.27
ATG2B-204ENST00000488421 PCDHB8Q9UN66 801 aa13.35□□□□□ -0.27
ATG2B-204ENST00000488421 ST18O60284 1047 aa13.34□□□□□ -0.27
ATG2B-204ENST00000488421 DCAF8Q5TAQ9 597 aa13.34□□□□□ -0.27
ATG2B-204ENST00000488421 CDAN1Q8IWY9 1227 aa13.31□□□□□ -0.28
ATG2B-204ENST00000488421 OCEL1Q9H607 264 aa13.29□□□□□ -0.28
ATG2B-204ENST00000488421 PDCD7Q8N8D1 485 aaKnown RBP13.21□□□□□ -0.29
ATG2B-204ENST00000488421 GSE1Q14687 1217 aa13.2□□□□□ -0.3
ATG2B-204ENST00000488421 CHRM1P11229 460 aaPredicted RBP13.13□□□□□ -0.31
ATG2B-204ENST00000488421 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.13□□□□□ -0.31
ATG2B-204ENST00000488421 ZNF467Q7Z7K2 595 aaPredicted RBP13.1□□□□□ -0.31
ATG2B-204ENST00000488421 SPOCK2Q92563 424 aa13.1□□□□□ -0.31
ATG2B-204ENST00000488421 TMEM121BQ9BXQ6 578 aaPredicted RBP13.1□□□□□ -0.31
ATG2B-204ENST00000488421 IFNLR1Q8IU57 520 aaPredicted RBP13.09□□□□□ -0.31
ATG2B-204ENST00000488421 MARVELD3Q96A59 401 aa13.09□□□□□ -0.31
ATG2B-204ENST00000488421 ILDR1Q86SU0 546 aaPredicted RBP13.07□□□□□ -0.32
ATG2B-204ENST00000488421 PSEN1P49768 467 aa13.06□□□□□ -0.32
ATG2B-204ENST00000488421 SNPHO15079 494 aa13.04□□□□□ -0.32
ATG2B-204ENST00000488421 SPNS2Q8IVW8 549 aa13.03□□□□□ -0.32
ATG2B-204ENST00000488421 CIZ1Q9ULV3 898 aaPredicted RBP13.03□□□□□ -0.32
ATG2B-204ENST00000488421 MKRN3Q13064 507 aaKnown RBP13.02□□□□□ -0.33
ATG2B-204ENST00000488421 MMRN1Q13201 1228 aa13.02□□□□□ -0.33
ATG2B-204ENST00000488421 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.02□□□□□ -0.338e-10■■■□□ 14.8
ATG2B-204ENST00000488421 POTEB3A0JP26 581 aa13.01□□□□□ -0.33
ATG2B-204ENST00000488421 POTEBQ6S5H4 581 aa13.01□□□□□ -0.33
ATG2B-204ENST00000488421 DPY19L2Q6NUT2 758 aa13□□□□□ -0.33
ATG2B-204ENST00000488421 L3MBTL3Q96JM7 780 aaPredicted RBP13□□□□□ -0.33
ATG2B-204ENST00000488421 C3orf67Q6ZVT6 689 aa12.98□□□□□ -0.33
ATG2B-204ENST00000488421 GOLGA2Q08379 1002 aa12.97□□□□□ -0.33
ATG2B-204ENST00000488421 PDAP1Q13442 181 aaKnown RBP12.95□□□□□ -0.34
ATG2B-204ENST00000488421 KRTAP3-3Q9BYR6 98 aa12.91□□□□□ -0.34
ATG2B-204ENST00000488421 KRTAP3-2Q9BYR7 98 aa12.91□□□□□ -0.34
ATG2B-204ENST00000488421 EMP3P54852 163 aa12.9□□□□□ -0.34
ATG2B-204ENST00000488421 CABP2Q9NPB3 220 aa12.9□□□□□ -0.34
ATG2B-204ENST00000488421 HOXB3P14651 431 aaPredicted RBP12.87□□□□□ -0.35
ATG2B-204ENST00000488421 HS3ST6Q96QI5 342 aa12.87□□□□□ -0.35
ATG2B-204ENST00000488421 TRIM41Q8WV44 630 aa12.86□□□□□ -0.35
ATG2B-204ENST00000488421 FAM205CA6NFA0 338 aa12.84□□□□□ -0.35
ATG2B-204ENST00000488421 BOLA1Q9Y3E2 137 aa12.84□□□□□ -0.35
ATG2B-204ENST00000488421 EFCAB3Q8N7B9 438 aa12.75□□□□□ -0.37
ATG2B-204ENST00000488421 HOXB1P14653 301 aaPredicted RBP12.73□□□□□ -0.37
ATG2B-204ENST00000488421 TMEM92Q6UXU6 159 aa12.71□□□□□ -0.37
ATG2B-204ENST00000488421 G3V3G9 751 aa12.67□□□□□ -0.38
ATG2B-204ENST00000488421 RIOK3O14730 519 aaKnown RBP12.66□□□□□ -0.38
ATG2B-204ENST00000488421 RNF25Q96BH1 459 aaPredicted RBP12.66□□□□□ -0.38
ATG2B-204ENST00000488421 MICALL2Q8IY33 904 aa12.65□□□□□ -0.38
ATG2B-204ENST00000488421 MS4A4AQ96JQ5 239 aa12.65□□□□□ -0.38
ATG2B-204ENST00000488421 DOK7Q18PE1 504 aa12.63□□□□□ -0.39
ATG2B-204ENST00000488421 ZNF710Q8N1W2 664 aa12.62□□□□□ -0.39
ATG2B-204ENST00000488421 VGFO15240 615 aaPredicted RBP12.6□□□□□ -0.39
ATG2B-204ENST00000488421 ERBB3P21860 1342 aa12.59□□□□□ -0.39
ATG2B-204ENST00000488421 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.57□□□□□ -0.4
ATG2B-204ENST00000488421 ZFP91Q96JP5 570 aaPredicted RBP12.57□□□□□ -0.4
ATG2B-204ENST00000488421 VARS2Q5ST30 1063 aaKnown RBP12.56□□□□□ -0.4
ATG2B-204ENST00000488421 GPR153Q6NV75 609 aa12.56□□□□□ -0.4
ATG2B-204ENST00000488421 TAOK2Q9UL54 1235 aa12.56□□□□□ -0.4
ATG2B-204ENST00000488421 PHF8Q9UPP1 1060 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms