RNA–Protein interactions for RNA: ENST00000488354.1

PSMD1-211, Transcript of proteasome 26S subunit, non-ATPase 1, humanhuman

TSL 3

Gene PSMD1, Length 659 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD1-211ENST00000488354 PLEKHG5O94827 1062 aa13.81□□□□□ -0.2
PSMD1-211ENST00000488354 ATMINO43313 823 aaPredicted RBP13.8□□□□□ -0.2
PSMD1-211ENST00000488354 METRNQ9UJH8 293 aa13.8□□□□□ -0.2
PSMD1-211ENST00000488354 ASTLQ6HA08 431 aaPredicted RBP13.79□□□□□ -0.2
PSMD1-211ENST00000488354 CCDC61Q9Y6R9 512 aa13.76□□□□□ -0.21
PSMD1-211ENST00000488354 SLC39A7Q92504 469 aa13.75□□□□□ -0.21
PSMD1-211ENST00000488354 C7P10643 843 aa13.74□□□□□ -0.21
PSMD1-211ENST00000488354 KIF12Q96FN5 646 aa13.72□□□□□ -0.21
PSMD1-211ENST00000488354 ATN1P54259 1190 aaPredicted RBP13.71□□□□□ -0.21
PSMD1-211ENST00000488354 PLCD3Q8N3E9 789 aa13.7□□□□□ -0.22
PSMD1-211ENST00000488354 RASEFQ8IZ41 740 aa13.69□□□□□ -0.22
PSMD1-211ENST00000488354 MAP3K13O43283 966 aa13.67□□□□□ -0.22
PSMD1-211ENST00000488354 TRPC6Q9Y210 931 aa13.67□□□□□ -0.22
PSMD1-211ENST00000488354 POTEJP0CG39 1038 aa13.66□□□□□ -0.22
PSMD1-211ENST00000488354 POTEMA6NI47 508 aa13.64□□□□□ -0.23
PSMD1-211ENST00000488354 BMP2KQ9NSY1 1161 aaPredicted RBP13.63□□□□□ -0.23
PSMD1-211ENST00000488354 POTEGQ6S5H5 508 aa13.61□□□□□ -0.23
PSMD1-211ENST00000488354 MAMSTRQ6ZN01 415 aa13.61□□□□□ -0.23
PSMD1-211ENST00000488354 SCUBE2Q9NQ36 999 aa13.56□□□□□ -0.24
PSMD1-211ENST00000488354 TIE1P35590 1138 aa13.55□□□□□ -0.24
PSMD1-211ENST00000488354 FAM163AQ96GL9 167 aaPredicted RBP13.55□□□□□ -0.24
PSMD1-211ENST00000488354 SEC24BO95487 1268 aa13.53□□□□□ -0.24
PSMD1-211ENST00000488354 POTEFA5A3E0 1075 aa13.52□□□□□ -0.25
PSMD1-211ENST00000488354 PCDHB13Q9Y5F0 798 aa13.52□□□□□ -0.25
PSMD1-211ENST00000488354 FKBP8Q14318 412 aa13.51□□□□□ -0.25
PSMD1-211ENST00000488354 TTLL13PA6NNM8 815 aa13.5□□□□□ -0.25
PSMD1-211ENST00000488354 ZBTB47Q9UFB7 747 aaPredicted RBP13.5□□□□□ -0.25
PSMD1-211ENST00000488354 NUBP1P53384 320 aa13.47□□□□□ -0.25
PSMD1-211ENST00000488354 COLQQ9Y215 455 aaPredicted RBP13.47□□□□□ -0.25
PSMD1-211ENST00000488354 TRIM35Q9UPQ4 493 aa13.45□□□□□ -0.26
PSMD1-211ENST00000488354 FAM212AQ96EL1 285 aa13.42□□□□□ -0.26
PSMD1-211ENST00000488354 IFNL1Q8IU54 200 aa13.41□□□□□ -0.26
PSMD1-211ENST00000488354 SGIP1Q9BQI5 828 aa13.41□□□□□ -0.26
PSMD1-211ENST00000488354 DCAF8Q5TAQ9 597 aa13.38□□□□□ -0.27
PSMD1-211ENST00000488354 TMEM106CQ9BVX2 250 aa13.38□□□□□ -0.27
PSMD1-211ENST00000488354 LCE2DQ5TA82 110 aaPredicted RBP13.36□□□□□ -0.27
PSMD1-211ENST00000488354 IER5LQ5T953 404 aa13.33□□□□□ -0.28
PSMD1-211ENST00000488354 PCDH10Q9P2E7 1040 aa13.33□□□□□ -0.28
PSMD1-211ENST00000488354 PYGBP11216 843 aa13.31□□□□□ -0.28
PSMD1-211ENST00000488354 PLCG2P16885 1265 aa13.29□□□□□ -0.28
PSMD1-211ENST00000488354 SLAIN1Q8ND83 568 aa13.27□□□□□ -0.29
PSMD1-211ENST00000488354 FBXO3Q9UK99 471 aa13.23□□□□□ -0.29
PSMD1-211ENST00000488354 PCDHB8Q9UN66 801 aa13.23□□□□□ -0.29
PSMD1-211ENST00000488354 KLHL34Q8N239 644 aa13.22□□□□□ -0.29
PSMD1-211ENST00000488354 IRX5P78411 483 aaPredicted RBP13.17□□□□□ -0.3
PSMD1-211ENST00000488354 CDAN1Q8IWY9 1227 aa13.15□□□□□ -0.3
PSMD1-211ENST00000488354 OCEL1Q9H607 264 aa13.15□□□□□ -0.3
PSMD1-211ENST00000488354 ST18O60284 1047 aa13.13□□□□□ -0.31
PSMD1-211ENST00000488354 VASPP50552 380 aaPredicted RBP13.08□□□□□ -0.32
PSMD1-211ENST00000488354 GSE1Q14687 1217 aa13.08□□□□□ -0.32
PSMD1-211ENST00000488354 GOLGA2Q08379 1002 aa13.07□□□□□ -0.32
PSMD1-211ENST00000488354 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.07□□□□□ -0.32
PSMD1-211ENST00000488354 MKRN3Q13064 507 aaKnown RBP13.02□□□□□ -0.33
PSMD1-211ENST00000488354 ZNF467Q7Z7K2 595 aaPredicted RBP13.02□□□□□ -0.33
PSMD1-211ENST00000488354 SNPHO15079 494 aa12.98□□□□□ -0.33
PSMD1-211ENST00000488354 PSEN1P49768 467 aa12.96□□□□□ -0.33
PSMD1-211ENST00000488354 MARVELD3Q96A59 401 aa12.96□□□□□ -0.33
PSMD1-211ENST00000488354 C3orf67Q6ZVT6 689 aa12.95□□□□□ -0.34
PSMD1-211ENST00000488354 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.95□□□□□ -0.34
PSMD1-211ENST00000488354 PDCD7Q8N8D1 485 aaKnown RBP12.94□□□□□ -0.34
PSMD1-211ENST00000488354 CIZ1Q9ULV3 898 aaPredicted RBP12.94□□□□□ -0.34
PSMD1-211ENST00000488354 CHRM1P11229 460 aaPredicted RBP12.92□□□□□ -0.34
PSMD1-211ENST00000488354 L3MBTL3Q96JM7 780 aaPredicted RBP12.92□□□□□ -0.34
PSMD1-211ENST00000488354 TMEM121BQ9BXQ6 578 aaPredicted RBP12.9□□□□□ -0.34
PSMD1-211ENST00000488354 SPOCK2Q92563 424 aa12.86□□□□□ -0.35
PSMD1-211ENST00000488354 PDAP1Q13442 181 aaKnown RBP12.85□□□□□ -0.35
PSMD1-211ENST00000488354 DPY19L2Q6NUT2 758 aa12.84□□□□□ -0.35
PSMD1-211ENST00000488354 IFNLR1Q8IU57 520 aaPredicted RBP12.84□□□□□ -0.35
PSMD1-211ENST00000488354 CABP2Q9NPB3 220 aa12.84□□□□□ -0.35
PSMD1-211ENST00000488354 EMP3P54852 163 aa12.82□□□□□ -0.36
PSMD1-211ENST00000488354 G3V3G9 751 aa12.81□□□□□ -0.36
PSMD1-211ENST00000488354 SPNS2Q8IVW8 549 aa12.8□□□□□ -0.36
PSMD1-211ENST00000488354 MMRN1Q13201 1228 aa12.78□□□□□ -0.36
PSMD1-211ENST00000488354 FAM205CA6NFA0 338 aa12.76□□□□□ -0.37
PSMD1-211ENST00000488354 BOLA1Q9Y3E2 137 aa12.73□□□□□ -0.37
PSMD1-211ENST00000488354 HS3ST6Q96QI5 342 aa12.71□□□□□ -0.37
PSMD1-211ENST00000488354 POTEB3A0JP26 581 aa12.69□□□□□ -0.38
PSMD1-211ENST00000488354 POTEBQ6S5H4 581 aa12.69□□□□□ -0.38
PSMD1-211ENST00000488354 ILDR1Q86SU0 546 aaPredicted RBP12.69□□□□□ -0.38
PSMD1-211ENST00000488354 ZNF710Q8N1W2 664 aa12.65□□□□□ -0.38
PSMD1-211ENST00000488354 EFCAB3Q8N7B9 438 aa12.65□□□□□ -0.38
PSMD1-211ENST00000488354 KRTAP3-3Q9BYR6 98 aa12.61□□□□□ -0.39
PSMD1-211ENST00000488354 KRTAP3-2Q9BYR7 98 aa12.61□□□□□ -0.39
PSMD1-211ENST00000488354 HOXB3P14651 431 aaPredicted RBP12.6□□□□□ -0.39
PSMD1-211ENST00000488354 DOK7Q18PE1 504 aa12.56□□□□□ -0.4
PSMD1-211ENST00000488354 TRIM41Q8WV44 630 aa12.56□□□□□ -0.4
PSMD1-211ENST00000488354 ERBB3P21860 1342 aa12.56□□□□□ -0.4
PSMD1-211ENST00000488354 HOXB1P14653 301 aaPredicted RBP12.53□□□□□ -0.4
PSMD1-211ENST00000488354 RIMBP2O15034 1052 aa12.49□□□□□ -0.41
PSMD1-211ENST00000488354 RIOK3O14730 519 aaKnown RBP12.48□□□□□ -0.41
PSMD1-211ENST00000488354 MICALL2Q8IY33 904 aa12.48□□□□□ -0.41
PSMD1-211ENST00000488354 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.47□□□□□ -0.41
PSMD1-211ENST00000488354 ZFP91Q96JP5 570 aaPredicted RBP12.47□□□□□ -0.41
PSMD1-211ENST00000488354 VARS2Q5ST30 1063 aaKnown RBP12.46□□□□□ -0.41
PSMD1-211ENST00000488354 TMEM92Q6UXU6 159 aa12.46□□□□□ -0.41
PSMD1-211ENST00000488354 SOX12O15370 315 aa12.45□□□□□ -0.42
PSMD1-211ENST00000488354 PHF8Q9UPP1 1060 aa12.45□□□□□ -0.42
PSMD1-211ENST00000488354 RNF25Q96BH1 459 aaPredicted RBP12.44□□□□□ -0.42
PSMD1-211ENST00000488354 VGFO15240 615 aaPredicted RBP12.41□□□□□ -0.42
PSMD1-211ENST00000488354 MS4A4AQ96JQ5 239 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms