RNA–Protein interactions for RNA: ENST00000487210.5

PLCB1-208, Transcript of phospholipase C beta 1, humanhuman

TSL 1 (best)

Gene PLCB1, Length 4,781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLCB1-208ENST00000487210 EIF4G1Q04637 1599 aaKnown RBP6.79□□□□□ -1.32
PLCB1-208ENST00000487210 IPO9Q96P70 1041 aaKnown RBP6.79□□□□□ -1.32
PLCB1-208ENST00000487210 WASHC2AQ641Q2 1341 aa6.79□□□□□ -1.32
PLCB1-208ENST00000487210 TAF7LQ5H9L4 462 aa6.78□□□□□ -1.32
PLCB1-208ENST00000487210 WASHC2CQ9Y4E1 1318 aa6.78□□□□□ -1.32
PLCB1-208ENST00000487210 PABPN1Q86U42 306 aaKnown RBP eCLIP6.77□□□□□ -1.33
PLCB1-208ENST00000487210 PAXIP1Q6ZW49 1069 aaPredicted RBP6.77□□□□□ -1.33
PLCB1-208ENST00000487210 HSP90AA1P07900 732 aaKnown RBP6.76□□□□□ -1.33
PLCB1-208ENST00000487210 HNRNPUL2Q1KMD3 747 aaKnown RBP6.76□□□□□ -1.33
PLCB1-208ENST00000487210 FAM43AQ8N2R8 423 aa6.76□□□□□ -1.33
PLCB1-208ENST00000487210 NAP1L5Q96NT1 182 aaPredicted RBP6.75□□□□□ -1.33
PLCB1-208ENST00000487210 RRP9O43818 475 aaKnown RBP6.74□□□□□ -1.33
PLCB1-208ENST00000487210 GSE1Q14687 1217 aa6.74□□□□□ -1.33
PLCB1-208ENST00000487210 USP35Q9P2H5 1018 aa6.74□□□□□ -1.33
PLCB1-208ENST00000487210 B4GALNT3Q6L9W6 998 aa6.73□□□□□ -1.33
PLCB1-208ENST00000487210 SCRIBQ14160 1630 aa6.73□□□□□ -1.33
PLCB1-208ENST00000487210 NPM2Q86SE8 214 aaKnown RBP6.73□□□□□ -1.33
PLCB1-208ENST00000487210 RGS3P49796 1198 aa6.72□□□□□ -1.33
PLCB1-208ENST00000487210 PPP4R2Q9NY27 417 aa6.72□□□□□ -1.33
PLCB1-208ENST00000487210 BBXQ8WY36 941 aaPredicted RBP6.71□□□□□ -1.33
PLCB1-208ENST00000487210 NAP1L2Q9ULW6 460 aaPredicted RBP6.71□□□□□ -1.33
PLCB1-208ENST00000487210 CHMP4BQ9H444 224 aaKnown RBP6.71□□□□□ -1.34
PLCB1-208ENST00000487210 FRAT1Q92837 279 aaPredicted RBP6.71□□□□□ -1.34
PLCB1-208ENST00000487210 PHF23Q9BUL5 403 aaPredicted RBP6.71□□□□□ -1.34
PLCB1-208ENST00000487210 ARID4BQ4LE39 1312 aaPredicted RBP6.7□□□□□ -1.34
PLCB1-208ENST00000487210 NCBP3Q53F19 620 aaKnown RBP6.69□□□□□ -1.34
PLCB1-208ENST00000487210 PPM1GO15355 546 aaPredicted RBP6.68□□□□□ -1.34
PLCB1-208ENST00000487210 CECR2Q9BXF3 1484 aa6.68□□□□□ -1.34
PLCB1-208ENST00000487210 DDX10Q13206 875 aaKnown RBP6.67□□□□□ -1.34
PLCB1-208ENST00000487210 DHX37Q8IY37 1157 aaKnown RBP6.67□□□□□ -1.34
PLCB1-208ENST00000487210 RRAGDQ9NQL2 400 aaPredicted RBP6.66□□□□□ -1.34
PLCB1-208ENST00000487210 DCAF11Q8TEB1 546 aa6.66□□□□□ -1.34
PLCB1-208ENST00000487210 PRDM4Q9UKN5 801 aa6.66□□□□□ -1.34
PLCB1-208ENST00000487210 PNNQ9H307 717 aaKnown RBP6.65□□□□□ -1.35
PLCB1-208ENST00000487210 CANXP27824 592 aaKnown RBP6.64□□□□□ -1.35
PLCB1-208ENST00000487210 HNRNPUQ00839 825 aaKnown RBP eCLIP6.64□□□□□ -1.35
PLCB1-208ENST00000487210 CALD1Q05682 793 aaKnown RBP6.64□□□□□ -1.35
PLCB1-208ENST00000487210 ARXQ96QS3 562 aa6.63□□□□□ -1.35
PLCB1-208ENST00000487210 GTF2E1P29083 439 aaPredicted RBP6.63□□□□□ -1.35
PLCB1-208ENST00000487210 ANP32CO43423 234 aa6.62□□□□□ -1.35
PLCB1-208ENST00000487210 NFKBIBQ15653 356 aa6.62□□□□□ -1.35
PLCB1-208ENST00000487210 ZNF326Q5BKZ1 582 aaKnown RBP6.62□□□□□ -1.35
PLCB1-208ENST00000487210 PLPPR3Q6T4P5 718 aa6.61□□□□□ -1.35
PLCB1-208ENST00000487210 CNGB1Q14028 1251 aaPredicted RBP6.61□□□□□ -1.35
PLCB1-208ENST00000487210 PLCD3Q8N3E9 789 aa6.6□□□□□ -1.35
PLCB1-208ENST00000487210 IPO4Q8TEX9 1081 aaKnown RBP6.6□□□□□ -1.35
PLCB1-208ENST00000487210 RSPH4AQ5TD94 716 aa6.6□□□□□ -1.35
PLCB1-208ENST00000487210 CHMP4AQ9BY43 222 aa6.6□□□□□ -1.35
PLCB1-208ENST00000487210 STAC3Q96MF2 364 aa6.6□□□□□ -1.35
PLCB1-208ENST00000487210 BAZ1BQ9UIG0 1483 aaKnown RBP6.59□□□□□ -1.35
PLCB1-208ENST00000487210 PDCL3Q9H2J4 239 aa6.59□□□□□ -1.35
PLCB1-208ENST00000487210 ZHX1Q9UKY1 873 aaPredicted RBP6.59□□□□□ -1.35
PLCB1-208ENST00000487210 CCER2I3L3R5 266 aa6.58□□□□□ -1.36
PLCB1-208ENST00000487210 SIN3AQ96ST3 1273 aa6.58□□□□□ -1.36
PLCB1-208ENST00000487210 BRD2P25440 801 aaKnown RBP6.57□□□□□ -1.36
PLCB1-208ENST00000487210 HAP1P54257 671 aaPredicted RBP6.57□□□□□ -1.36
PLCB1-208ENST00000487210 FOXD1Q16676 465 aa6.57□□□□□ -1.36
PLCB1-208ENST00000487210 AMER1Q5JTC6 1135 aaPredicted RBP6.57□□□□□ -1.36
PLCB1-208ENST00000487210 ZFP91Q96JP5 570 aaPredicted RBP6.56□□□□□ -1.36
PLCB1-208ENST00000487210 VGLL3A8MV65 326 aa6.56□□□□□ -1.36
PLCB1-208ENST00000487210 SLC4A3P48751 1232 aa6.56□□□□□ -1.36
PLCB1-208ENST00000487210 PEG3Q9GZU2 1588 aa6.55□□□□□ -1.36
PLCB1-208ENST00000487210 ARID3AQ99856 593 aa6.54□□□□□ -1.36
PLCB1-208ENST00000487210 HIRIP3Q9BW71 556 aaPredicted RBP6.54□□□□□ -1.36
PLCB1-208ENST00000487210 CENPJQ9HC77 1338 aaPredicted RBP6.54□□□□□ -1.36
PLCB1-208ENST00000487210 FRAT2O75474 233 aaPredicted RBP6.54□□□□□ -1.36
PLCB1-208ENST00000487210 CLCN1P35523 988 aa6.54□□□□□ -1.36
PLCB1-208ENST00000487210 THOC2Q8NI27 1593 aaKnown RBP6.53□□□□□ -1.36
PLCB1-208ENST00000487210 DDRGK1Q96HY6 314 aa6.53□□□□□ -1.36
PLCB1-208ENST00000487210 EEA1Q15075 1411 aa6.53□□□□□ -1.36
PLCB1-208ENST00000487210 WRNQ14191 1432 aaPredicted RBP eCLIP6.53□□□□□ -1.36
PLCB1-208ENST00000487210 FTSJ3Q8IY81 847 aaKnown RBP6.53□□□□□ -1.36
PLCB1-208ENST00000487210 PRDM10Q9NQV6 1147 aa6.53□□□□□ -1.36
PLCB1-208ENST00000487210 NCLP19338 710 aaKnown RBP6.52□□□□□ -1.37
PLCB1-208ENST00000487210 ZNF830Q96NB3 372 aaPredicted RBP6.52□□□□□ -1.37
PLCB1-208ENST00000487210 NCAPD3P42695 1498 aa6.52□□□□□ -1.37
PLCB1-208ENST00000487210 PPP1R15AO75807 674 aaPredicted RBP6.52□□□□□ -1.37
PLCB1-208ENST00000487210 DCAF8L2P0C7V8 631 aa6.52□□□□□ -1.37
PLCB1-208ENST00000487210 DHX57Q6P158 1386 aaKnown RBP6.51□□□□□ -1.37
PLCB1-208ENST00000487210 PDE4AP27815 886 aa6.51□□□□□ -1.37
PLCB1-208ENST00000487210 L1TD1Q5T7N2 865 aaKnown RBP6.51□□□□□ -1.37
PLCB1-208ENST00000487210 SECISBP2LQ93073 1101 aaKnown RBP6.51□□□□□ -1.37
PLCB1-208ENST00000487210 TPM2P07951 284 aa6.51□□□□□ -1.37
PLCB1-208ENST00000487210 CEP162Q5TB80 1403 aa6.51□□□□□ -1.37
PLCB1-208ENST00000487210 ANP32BQ92688 251 aaKnown RBP6.5□□□□□ -1.37
PLCB1-208ENST00000487210 SMARCA4P51532 1647 aa6.5□□□□□ -1.37
PLCB1-208ENST00000487210 DNAJC5Q9H3Z4 198 aa6.5□□□□□ -1.37
PLCB1-208ENST00000487210 HMGXB3Q12766 1538 aa6.5□□□□□ -1.37
PLCB1-208ENST00000487210 SAMD1Q6SPF0 538 aaPredicted RBP6.5□□□□□ -1.37
PLCB1-208ENST00000487210 POGKQ9P215 609 aa6.49□□□□□ -1.37
PLCB1-208ENST00000487210 SMAP1Q8IYB5 467 aaPredicted RBP6.48□□□□□ -1.37
PLCB1-208ENST00000487210 FAM13BQ9NYF5 915 aa6.48□□□□□ -1.37
PLCB1-208ENST00000487210 TMEM51Q9NW97 253 aa6.48□□□□□ -1.37
PLCB1-208ENST00000487210 MAPK8IP2Q13387 824 aaPredicted RBP6.48□□□□□ -1.37
PLCB1-208ENST00000487210 CUX2O14529 1486 aa6.47□□□□□ -1.37
PLCB1-208ENST00000487210 TULP1O00294 542 aaPredicted RBP6.47□□□□□ -1.37
PLCB1-208ENST00000487210 CDK11BP21127 795 aaKnown RBP6.47□□□□□ -1.37
PLCB1-208ENST00000487210 PPP4R3BQ5MIZ7 849 aa6.47□□□□□ -1.37
PLCB1-208ENST00000487210 TEX2Q8IWB9 1127 aa6.47□□□□□ -1.37
PLCB1-208ENST00000487210 ATAD2BQ9ULI0 1458 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms