RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 CCDC61Q9Y6R9 512 aa15.58■□□□□ 0.08
LTN1-206ENST00000486427 CIZ1Q9ULV3 898 aaPredicted RBP15.57■□□□□ 0.08
LTN1-206ENST00000486427 GSE1Q14687 1217 aa15.55■□□□□ 0.08
LTN1-206ENST00000486427 ZNF579Q8NAF0 562 aaKnown RBP15.54■□□□□ 0.08
LTN1-206ENST00000486427 PHF12Q96QT6 1004 aa15.54■□□□□ 0.08
LTN1-206ENST00000486427 PKD2Q13563 968 aa15.46■□□□□ 0.07
LTN1-206ENST00000486427 PYGBP11216 843 aa15.45■□□□□ 0.06
LTN1-206ENST00000486427 KIF12Q96FN5 646 aa15.43■□□□□ 0.06
LTN1-206ENST00000486427 MAP3K13O43283 966 aa15.39■□□□□ 0.05
LTN1-206ENST00000486427 GABBR2O75899 941 aa15.38■□□□□ 0.05
LTN1-206ENST00000486427 CHRM1P11229 460 aaPredicted RBP15.37■□□□□ 0.05
LTN1-206ENST00000486427 RTN4Q9NQC3 1192 aaKnown RBP15.35■□□□□ 0.05
LTN1-206ENST00000486427 TRIM41Q8WV44 630 aa15.34■□□□□ 0.05
LTN1-206ENST00000486427 MS4A3Q96HJ5 214 aa15.34■□□□□ 0.05
LTN1-206ENST00000486427 GALR2O43603 387 aaPredicted RBP15.33■□□□□ 0.04
LTN1-206ENST00000486427 ECM2O94769 699 aaPredicted RBP15.33■□□□□ 0.04
LTN1-206ENST00000486427 AMER1Q5JTC6 1135 aaPredicted RBP15.32■□□□□ 0.04
LTN1-206ENST00000486427 PCDHB13Q9Y5F0 798 aa15.32■□□□□ 0.04
LTN1-206ENST00000486427 CLCN6P51797 869 aa15.29■□□□□ 0.04
LTN1-206ENST00000486427 IFNL1Q8IU54 200 aa15.28■□□□□ 0.04
LTN1-206ENST00000486427 SGIP1Q9BQI5 828 aa15.28■□□□□ 0.04
LTN1-206ENST00000486427 PCDHB8Q9UN66 801 aa15.27■□□□□ 0.04
LTN1-206ENST00000486427 RNF25Q96BH1 459 aaPredicted RBP15.26■□□□□ 0.03
LTN1-206ENST00000486427 TRPC6Q9Y210 931 aa15.24■□□□□ 0.03
LTN1-206ENST00000486427 RGL2O15211 777 aa15.22■□□□□ 0.03
LTN1-206ENST00000486427 ZNF467Q7Z7K2 595 aaPredicted RBP15.19■□□□□ 0.02
LTN1-206ENST00000486427 RIOK3O14730 519 aaKnown RBP15.16■□□□□ 0.02
LTN1-206ENST00000486427 LHX8Q68G74 356 aa15.11■□□□□ 0.01
LTN1-206ENST00000486427 POTEIP0CG38 1075 aa15.1■□□□□ 0.01
LTN1-206ENST00000486427 BMP2KQ9NSY1 1161 aaPredicted RBP15.1■□□□□ 0.01
LTN1-206ENST00000486427 TIE1P35590 1138 aa15.08■□□□□ 0
LTN1-206ENST00000486427 PSEN1P49768 467 aa15.08■□□□□ 0
LTN1-206ENST00000486427 PDAP1Q13442 181 aaKnown RBP15.08■□□□□ 0
LTN1-206ENST00000486427 DCBLD2Q96PD2 775 aa15.08■□□□□ 0
LTN1-206ENST00000486427 TTLL13PA6NNM8 815 aa15.05■□□□□ -0
LTN1-206ENST00000486427 VGFO15240 615 aaPredicted RBP15.05■□□□□ -0
LTN1-206ENST00000486427 ATMINO43313 823 aaPredicted RBP15.05■□□□□ -0
LTN1-206ENST00000486427 TMEM106CQ9BVX2 250 aa15.05■□□□□ -0
LTN1-206ENST00000486427 ASTLQ6HA08 431 aaPredicted RBP15.04■□□□□ -0
LTN1-206ENST00000486427 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.02■□□□□ -0
LTN1-206ENST00000486427 ATN1P54259 1190 aaPredicted RBP15.02■□□□□ -0
LTN1-206ENST00000486427 ZFP91Q96JP5 570 aaPredicted RBP15.02■□□□□ -0
LTN1-206ENST00000486427 PELP1Q8IZL8 1130 aaKnown RBP14.99□□□□□ -0.01
LTN1-206ENST00000486427 DCAF8L2P0C7V8 631 aa14.96□□□□□ -0.01
LTN1-206ENST00000486427 TAOK2Q9UL54 1235 aa14.96□□□□□ -0.01
LTN1-206ENST00000486427 TRIM35Q9UPQ4 493 aa14.95□□□□□ -0.02
LTN1-206ENST00000486427 BCL11BQ9C0K0 894 aaPredicted RBP14.92□□□□□ -0.02
LTN1-206ENST00000486427 STK25O00506 426 aa14.91□□□□□ -0.02
LTN1-206ENST00000486427 CABP2Q9NPB3 220 aa14.9□□□□□ -0.02
LTN1-206ENST00000486427 STK24Q9Y6E0 443 aa14.89□□□□□ -0.03
LTN1-206ENST00000486427 CHGAP10645 457 aaKnown RBP14.88□□□□□ -0.03
LTN1-206ENST00000486427 HS6ST3Q8IZP7 471 aa14.86□□□□□ -0.03
LTN1-206ENST00000486427 EFCAB3Q8N7B9 438 aa14.82□□□□□ -0.04
LTN1-206ENST00000486427 GOLGA2Q08379 1002 aa14.81□□□□□ -0.04
LTN1-206ENST00000486427 SLC39A7Q92504 469 aa14.81□□□□□ -0.04
LTN1-206ENST00000486427 METRNQ9UJH8 293 aa14.8□□□□□ -0.04
LTN1-206ENST00000486427 C7P10643 843 aa14.78□□□□□ -0.04
LTN1-206ENST00000486427 MKRN3Q13064 507 aaKnown RBP14.78□□□□□ -0.04
LTN1-206ENST00000486427 IER5LQ5T953 404 aa14.78□□□□□ -0.04
LTN1-206ENST00000486427 POTEFA5A3E0 1075 aa14.76□□□□□ -0.05
LTN1-206ENST00000486427 COLQQ9Y215 455 aaPredicted RBP14.75□□□□□ -0.05
LTN1-206ENST00000486427 IRX5P78411 483 aaPredicted RBP14.74□□□□□ -0.05
LTN1-206ENST00000486427 NKX1-1Q15270 411 aaPredicted RBP14.71□□□□□ -0.05
LTN1-206ENST00000486427 DNAJC5Q9H3Z4 198 aa14.71□□□□□ -0.05
LTN1-206ENST00000486427 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.7□□□□□ -0.063e-6■■■□□ 15.8
LTN1-206ENST00000486427 SOX12O15370 315 aa14.69□□□□□ -0.06
LTN1-206ENST00000486427 ILDR1Q86SU0 546 aaPredicted RBP14.69□□□□□ -0.06
LTN1-206ENST00000486427 PHF8Q9UPP1 1060 aa14.69□□□□□ -0.06
LTN1-206ENST00000486427 SEC24BO95487 1268 aa14.68□□□□□ -0.06
LTN1-206ENST00000486427 MFRPQ9BY79 579 aa14.68□□□□□ -0.06
LTN1-206ENST00000486427 OCEL1Q9H607 264 aa14.67□□□□□ -0.06
LTN1-206ENST00000486427 PLCG2P16885 1265 aa14.66□□□□□ -0.06
LTN1-206ENST00000486427 PDCD7Q8N8D1 485 aaKnown RBP14.66□□□□□ -0.06
LTN1-206ENST00000486427 FBXO22Q8NEZ5 403 aa14.64□□□□□ -0.07
LTN1-206ENST00000486427 MS4A4AQ96JQ5 239 aa14.64□□□□□ -0.07
LTN1-206ENST00000486427 POTEB2H3BUK9 544 aa14.63□□□□□ -0.07
LTN1-206ENST00000486427 DPY19L2Q6NUT2 758 aa14.62□□□□□ -0.07
LTN1-206ENST00000486427 NLRP6P59044 892 aa14.61□□□□□ -0.07
LTN1-206ENST00000486427 BBXQ8WY36 941 aaPredicted RBP14.61□□□□□ -0.07
LTN1-206ENST00000486427 PLSCR2Q9NRY7 297 aa14.61□□□□□ -0.07
LTN1-206ENST00000486427 POTEJP0CG39 1038 aa14.56□□□□□ -0.08
LTN1-206ENST00000486427 GTPBP6O43824 516 aaPredicted RBP14.53□□□□□ -0.08
LTN1-206ENST00000486427 PPP1R37O75864 691 aa14.51□□□□□ -0.09
LTN1-206ENST00000486427 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.48□□□□□ -0.09
LTN1-206ENST00000486427 L3MBTL3Q96JM7 780 aaPredicted RBP14.45□□□□□ -0.1
LTN1-206ENST00000486427 BOLA1Q9Y3E2 137 aa14.45□□□□□ -0.1
LTN1-206ENST00000486427 RYDENQ9NUL5 291 aaKnown RBP14.44□□□□□ -0.1
LTN1-206ENST00000486427 PAXIP1Q6ZW49 1069 aaPredicted RBP14.42□□□□□ -0.1
LTN1-206ENST00000486427 MICALL2Q8IY33 904 aa14.41□□□□□ -0.1
LTN1-206ENST00000486427 SPRYD3Q8NCJ5 442 aa14.41□□□□□ -0.1
LTN1-206ENST00000486427 TMEM121BQ9BXQ6 578 aaPredicted RBP14.41□□□□□ -0.1
LTN1-206ENST00000486427 CFAP44Q96MT7 982 aa14.4□□□□□ -0.1
LTN1-206ENST00000486427 OTUD5Q96G74 571 aa14.38□□□□□ -0.11
LTN1-206ENST00000486427 G3V3G9 751 aa14.37□□□□□ -0.11
LTN1-206ENST00000486427 MAMSTRQ6ZN01 415 aa14.34□□□□□ -0.11
LTN1-206ENST00000486427 SCUBE2Q9NQ36 999 aa14.33□□□□□ -0.12
LTN1-206ENST00000486427 C3orf67Q6ZVT6 689 aa14.32□□□□□ -0.12
LTN1-206ENST00000486427 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.3□□□□□ -0.12
LTN1-206ENST00000486427 PLCB2Q00722 1185 aa14.28□□□□□ -0.12
LTN1-206ENST00000486427 TMEM92Q6UXU6 159 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms