RNA–Protein interactions for RNA: ENST00000485497.2

SENP6-209, Transcript of SUMO specific peptidase 6, humanhuman

TSL 4

Gene SENP6, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP6-209ENST00000485497 PHF12Q96QT6 1004 aa15.13■□□□□ 0.01
SENP6-209ENST00000485497 FAM212AQ96EL1 285 aa15.12■□□□□ 0.01
SENP6-209ENST00000485497 CCDC61Q9Y6R9 512 aa15.12■□□□□ 0.01
SENP6-209ENST00000485497 SPOCK2Q92563 424 aa15.06■□□□□ 0
SENP6-209ENST00000485497 DCAF8Q5TAQ9 597 aa15.02■□□□□ -0
SENP6-209ENST00000485497 GALR2O43603 387 aaPredicted RBP15□□□□□ -0.01
SENP6-209ENST00000485497 KIF12Q96FN5 646 aa14.99□□□□□ -0.01
SENP6-209ENST00000485497 GSE1Q14687 1217 aa14.97□□□□□ -0.01
SENP6-209ENST00000485497 MS4A3Q96HJ5 214 aa14.95□□□□□ -0.02
SENP6-209ENST00000485497 MAP3K13O43283 966 aa14.92□□□□□ -0.02
SENP6-209ENST00000485497 DCBLD2Q96PD2 775 aa14.92□□□□□ -0.02
SENP6-209ENST00000485497 SGIP1Q9BQI5 828 aa14.89□□□□□ -0.03
SENP6-209ENST00000485497 PCDHB13Q9Y5F0 798 aa14.87□□□□□ -0.03
SENP6-209ENST00000485497 PYGBP11216 843 aa14.86□□□□□ -0.03
SENP6-209ENST00000485497 CIZ1Q9ULV3 898 aaPredicted RBP14.86□□□□□ -0.03
SENP6-209ENST00000485497 POTEIP0CG38 1075 aa14.85□□□□□ -0.03
SENP6-209ENST00000485497 CHRM1P11229 460 aaPredicted RBP14.8□□□□□ -0.04
SENP6-209ENST00000485497 IFNL1Q8IU54 200 aa14.78□□□□□ -0.04
SENP6-209ENST00000485497 ASTLQ6HA08 431 aaPredicted RBP14.76□□□□□ -0.05
SENP6-209ENST00000485497 TRIM41Q8WV44 630 aa14.75□□□□□ -0.05
SENP6-209ENST00000485497 TRPC6Q9Y210 931 aa14.75□□□□□ -0.05
SENP6-209ENST00000485497 TIE1P35590 1138 aa14.74□□□□□ -0.05
SENP6-209ENST00000485497 ATMINO43313 823 aaPredicted RBP14.72□□□□□ -0.05
SENP6-209ENST00000485497 ZNF467Q7Z7K2 595 aaPredicted RBP14.71□□□□□ -0.05
SENP6-209ENST00000485497 BMP2KQ9NSY1 1161 aaPredicted RBP14.71□□□□□ -0.05
SENP6-209ENST00000485497 PCDHB8Q9UN66 801 aa14.69□□□□□ -0.06
SENP6-209ENST00000485497 ATN1P54259 1190 aaPredicted RBP14.66□□□□□ -0.06
SENP6-209ENST00000485497 TTLL13PA6NNM8 815 aa14.65□□□□□ -0.06
SENP6-209ENST00000485497 PELP1Q8IZL8 1130 aaKnown RBP14.65□□□□□ -0.06
SENP6-209ENST00000485497 TMEM106CQ9BVX2 250 aa14.62□□□□□ -0.07
SENP6-209ENST00000485497 SLC39A7Q92504 469 aa14.6□□□□□ -0.07
SENP6-209ENST00000485497 C7P10643 843 aa14.57□□□□□ -0.08
SENP6-209ENST00000485497 METRNQ9UJH8 293 aa14.56□□□□□ -0.08
SENP6-209ENST00000485497 TRIM35Q9UPQ4 493 aa14.56□□□□□ -0.08
SENP6-209ENST00000485497 PDAP1Q13442 181 aaKnown RBP14.54□□□□□ -0.08
SENP6-209ENST00000485497 PSEN1P49768 467 aa14.53□□□□□ -0.08
SENP6-209ENST00000485497 LHX8Q68G74 356 aa14.52□□□□□ -0.09
SENP6-209ENST00000485497 ECM2O94769 699 aaPredicted RBP14.51□□□□□ -0.09
SENP6-209ENST00000485497 PKD2Q13563 968 aa14.51□□□□□ -0.09
SENP6-209ENST00000485497 RIOK3O14730 519 aaKnown RBP14.5□□□□□ -0.09
SENP6-209ENST00000485497 IER5LQ5T953 404 aa14.49□□□□□ -0.09
SENP6-209ENST00000485497 RNF25Q96BH1 459 aaPredicted RBP14.49□□□□□ -0.09
SENP6-209ENST00000485497 VGFO15240 615 aaPredicted RBP14.42□□□□□ -0.1
SENP6-209ENST00000485497 GOLGA2Q08379 1002 aa14.42□□□□□ -0.1
SENP6-209ENST00000485497 SEC24BO95487 1268 aa14.41□□□□□ -0.1
SENP6-209ENST00000485497 TAOK2Q9UL54 1235 aa14.4□□□□□ -0.1
SENP6-209ENST00000485497 POTEFA5A3E0 1075 aa14.38□□□□□ -0.11
SENP6-209ENST00000485497 POTEB2H3BUK9 544 aa14.37□□□□□ -0.11
SENP6-209ENST00000485497 MKRN3Q13064 507 aaKnown RBP14.37□□□□□ -0.11
SENP6-209ENST00000485497 COLQQ9Y215 455 aaPredicted RBP14.37□□□□□ -0.11
SENP6-209ENST00000485497 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.35□□□□□ -0.11
SENP6-209ENST00000485497 RGL2O15211 777 aa14.35□□□□□ -0.11
SENP6-209ENST00000485497 IRX5P78411 483 aaPredicted RBP14.35□□□□□ -0.11
SENP6-209ENST00000485497 ZFP91Q96JP5 570 aaPredicted RBP14.35□□□□□ -0.11
SENP6-209ENST00000485497 CABP2Q9NPB3 220 aa14.35□□□□□ -0.11
SENP6-209ENST00000485497 PLCG2P16885 1265 aa14.34□□□□□ -0.11
SENP6-209ENST00000485497 OCEL1Q9H607 264 aa14.31□□□□□ -0.12
SENP6-209ENST00000485497 POTEJP0CG39 1038 aa14.26□□□□□ -0.13
SENP6-209ENST00000485497 MAMSTRQ6ZN01 415 aa14.26□□□□□ -0.13
SENP6-209ENST00000485497 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.25□□□□□ -0.132e-7■■■□□ 17.9
SENP6-209ENST00000485497 BCL11BQ9C0K0 894 aaPredicted RBP14.24□□□□□ -0.13
SENP6-209ENST00000485497 PDCD7Q8N8D1 485 aaKnown RBP14.23□□□□□ -0.13
SENP6-209ENST00000485497 OTUD5Q96G74 571 aa14.23□□□□□ -0.13
SENP6-209ENST00000485497 STK25O00506 426 aa14.22□□□□□ -0.13
SENP6-209ENST00000485497 EFCAB3Q8N7B9 438 aa14.22□□□□□ -0.13
SENP6-209ENST00000485497 ILDR1Q86SU0 546 aaPredicted RBP14.21□□□□□ -0.13
SENP6-209ENST00000485497 SCUBE2Q9NQ36 999 aa14.21□□□□□ -0.13
SENP6-209ENST00000485497 STK24Q9Y6E0 443 aa14.21□□□□□ -0.13
SENP6-209ENST00000485497 SOX12O15370 315 aa14.17□□□□□ -0.14
SENP6-209ENST00000485497 AMER1Q5JTC6 1135 aaPredicted RBP14.12□□□□□ -0.15
SENP6-209ENST00000485497 L3MBTL3Q96JM7 780 aaPredicted RBP14.12□□□□□ -0.15
SENP6-209ENST00000485497 HS6ST3Q8IZP7 471 aa14.09□□□□□ -0.15
SENP6-209ENST00000485497 DPY19L2Q6NUT2 758 aa14.08□□□□□ -0.16
SENP6-209ENST00000485497 PHF8Q9UPP1 1060 aa14.08□□□□□ -0.16
SENP6-209ENST00000485497 NLRP6P59044 892 aa14.06□□□□□ -0.16
SENP6-209ENST00000485497 CHGAP10645 457 aaKnown RBP14.05□□□□□ -0.16
SENP6-209ENST00000485497 G3V3G9 751 aa14.04□□□□□ -0.16
SENP6-209ENST00000485497 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.03□□□□□ -0.16
SENP6-209ENST00000485497 BOLA1Q9Y3E2 137 aa14.03□□□□□ -0.16
SENP6-209ENST00000485497 C3orf67Q6ZVT6 689 aa14.02□□□□□ -0.17
SENP6-209ENST00000485497 MS4A4AQ96JQ5 239 aa14.02□□□□□ -0.17
SENP6-209ENST00000485497 MFRPQ9BY79 579 aa14.02□□□□□ -0.17
SENP6-209ENST00000485497 FBXO22Q8NEZ5 403 aa14.01□□□□□ -0.17
SENP6-209ENST00000485497 RTN4Q9NQC3 1192 aaKnown RBP14□□□□□ -0.17
SENP6-209ENST00000485497 DCAF8L2P0C7V8 631 aa13.99□□□□□ -0.17
SENP6-209ENST00000485497 SLAIN1Q8ND83 568 aa13.99□□□□□ -0.17
SENP6-209ENST00000485497 DNAJC5Q9H3Z4 198 aa13.96□□□□□ -0.17
SENP6-209ENST00000485497 TMEM121BQ9BXQ6 578 aaPredicted RBP13.95□□□□□ -0.18
SENP6-209ENST00000485497 MICALL2Q8IY33 904 aa13.92□□□□□ -0.18
SENP6-209ENST00000485497 NKX1-1Q15270 411 aaPredicted RBP13.85□□□□□ -0.19
SENP6-209ENST00000485497 RYDENQ9NUL5 291 aaKnown RBP13.84□□□□□ -0.19
SENP6-209ENST00000485497 SNPHO15079 494 aa13.8□□□□□ -0.2
SENP6-209ENST00000485497 PPP1R37O75864 691 aa13.78□□□□□ -0.2
SENP6-209ENST00000485497 FAM163AQ96GL9 167 aaPredicted RBP13.78□□□□□ -0.2
SENP6-209ENST00000485497 TMEM92Q6UXU6 159 aa13.74□□□□□ -0.21
SENP6-209ENST00000485497 LCE2DQ5TA82 110 aaPredicted RBP13.71□□□□□ -0.21
SENP6-209ENST00000485497 GTPBP6O43824 516 aaPredicted RBP13.7□□□□□ -0.22
SENP6-209ENST00000485497 BBXQ8WY36 941 aaPredicted RBP13.68□□□□□ -0.22
SENP6-209ENST00000485497 ST18O60284 1047 aa13.67□□□□□ -0.22
SENP6-209ENST00000485497 KIF3CO14782 793 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms