RNA–Protein interactions for RNA: ENST00000484520.1

SPTA1-206, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-206ENST00000484520 CCDC61Q9Y6R9 512 aa11.93□□□□□ -0.5
SPTA1-206ENST00000484520 ATMINO43313 823 aaPredicted RBP11.89□□□□□ -0.51
SPTA1-206ENST00000484520 ASTLQ6HA08 431 aaPredicted RBP11.89□□□□□ -0.51
SPTA1-206ENST00000484520 OTUD5Q96G74 571 aa11.88□□□□□ -0.51
SPTA1-206ENST00000484520 KIF12Q96FN5 646 aa11.87□□□□□ -0.51
SPTA1-206ENST00000484520 RASEFQ8IZ41 740 aa11.86□□□□□ -0.51
SPTA1-206ENST00000484520 PLCD3Q8N3E9 789 aa11.86□□□□□ -0.51
SPTA1-206ENST00000484520 METRNQ9UJH8 293 aa11.84□□□□□ -0.51
SPTA1-206ENST00000484520 FKBP8Q14318 412 aa11.83□□□□□ -0.52
SPTA1-206ENST00000484520 SLC39A7Q92504 469 aa11.82□□□□□ -0.52
SPTA1-206ENST00000484520 C7P10643 843 aa11.81□□□□□ -0.52
SPTA1-206ENST00000484520 MAP3K13O43283 966 aa11.8□□□□□ -0.52
SPTA1-206ENST00000484520 ATN1P54259 1190 aaPredicted RBP11.8□□□□□ -0.52
SPTA1-206ENST00000484520 TRPC6Q9Y210 931 aa11.79□□□□□ -0.52
SPTA1-206ENST00000484520 BMP2KQ9NSY1 1161 aaPredicted RBP11.76□□□□□ -0.53
SPTA1-206ENST00000484520 ZBTB47Q9UFB7 747 aaPredicted RBP11.74□□□□□ -0.53
SPTA1-206ENST00000484520 POTEJP0CG39 1038 aa11.73□□□□□ -0.53
SPTA1-206ENST00000484520 NUBP1P53384 320 aa11.73□□□□□ -0.53
SPTA1-206ENST00000484520 TIE1P35590 1138 aa11.71□□□□□ -0.53
SPTA1-206ENST00000484520 PCDHB13Q9Y5F0 798 aa11.67□□□□□ -0.54
SPTA1-206ENST00000484520 POTEFA5A3E0 1075 aa11.66□□□□□ -0.54
SPTA1-206ENST00000484520 TTLL13PA6NNM8 815 aa11.66□□□□□ -0.54
SPTA1-206ENST00000484520 MAMSTRQ6ZN01 415 aa11.65□□□□□ -0.54
SPTA1-206ENST00000484520 FAM212AQ96EL1 285 aa11.64□□□□□ -0.55
SPTA1-206ENST00000484520 SGIP1Q9BQI5 828 aa11.64□□□□□ -0.55
SPTA1-206ENST00000484520 IFNL1Q8IU54 200 aa11.6□□□□□ -0.55
SPTA1-206ENST00000484520 SCUBE2Q9NQ36 999 aa11.6□□□□□ -0.55
SPTA1-206ENST00000484520 POTEMA6NI47 508 aa11.59□□□□□ -0.55
SPTA1-206ENST00000484520 TRIM35Q9UPQ4 493 aa11.59□□□□□ -0.55
SPTA1-206ENST00000484520 COLQQ9Y215 455 aaPredicted RBP11.59□□□□□ -0.55
SPTA1-206ENST00000484520 SEC24BO95487 1268 aa11.58□□□□□ -0.56
SPTA1-206ENST00000484520 FBXO3Q9UK99 471 aa11.58□□□□□ -0.56
SPTA1-206ENST00000484520 DCAF8Q5TAQ9 597 aa11.56□□□□□ -0.56
SPTA1-206ENST00000484520 POTEGQ6S5H5 508 aa11.56□□□□□ -0.56
SPTA1-206ENST00000484520 TMEM106CQ9BVX2 250 aa11.53□□□□□ -0.56
SPTA1-206ENST00000484520 IER5LQ5T953 404 aa11.52□□□□□ -0.57
SPTA1-206ENST00000484520 PYGBP11216 843 aa11.51□□□□□ -0.57
SPTA1-206ENST00000484520 FAM163AQ96GL9 167 aaPredicted RBP11.5□□□□□ -0.57
SPTA1-206ENST00000484520 LCE2DQ5TA82 110 aaPredicted RBP11.47□□□□□ -0.57
SPTA1-206ENST00000484520 KLHL34Q8N239 644 aa11.46□□□□□ -0.57
SPTA1-206ENST00000484520 VASPP50552 380 aaPredicted RBP11.45□□□□□ -0.58
SPTA1-206ENST00000484520 PCDHB8Q9UN66 801 aa11.44□□□□□ -0.58
SPTA1-206ENST00000484520 PLCG2P16885 1265 aa11.42□□□□□ -0.58
SPTA1-206ENST00000484520 IRX5P78411 483 aaPredicted RBP11.4□□□□□ -0.58
SPTA1-206ENST00000484520 GSE1Q14687 1217 aa11.38□□□□□ -0.59
SPTA1-206ENST00000484520 PCDH10Q9P2E7 1040 aa11.37□□□□□ -0.59
SPTA1-206ENST00000484520 SLAIN1Q8ND83 568 aa11.36□□□□□ -0.59
SPTA1-206ENST00000484520 OCEL1Q9H607 264 aa11.34□□□□□ -0.59
SPTA1-206ENST00000484520 ZNF467Q7Z7K2 595 aaPredicted RBP11.32□□□□□ -0.6
SPTA1-206ENST00000484520 CHRM1P11229 460 aaPredicted RBP11.28□□□□□ -0.6
SPTA1-206ENST00000484520 IFNLR1Q8IU57 520 aaPredicted RBP11.26□□□□□ -0.61
SPTA1-206ENST00000484520 ST18O60284 1047 aa11.24□□□□□ -0.61
SPTA1-206ENST00000484520 PSEN1P49768 467 aa11.24□□□□□ -0.61
SPTA1-206ENST00000484520 GOLGA2Q08379 1002 aa11.24□□□□□ -0.61
SPTA1-206ENST00000484520 SPOCK2Q92563 424 aa11.24□□□□□ -0.61
SPTA1-206ENST00000484520 MKRN3Q13064 507 aaKnown RBP11.23□□□□□ -0.61
SPTA1-206ENST00000484520 PDCD7Q8N8D1 485 aaKnown RBP11.22□□□□□ -0.61
SPTA1-206ENST00000484520 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.22□□□□□ -0.61
SPTA1-206ENST00000484520 CIZ1Q9ULV3 898 aaPredicted RBP11.22□□□□□ -0.61
SPTA1-206ENST00000484520 CDAN1Q8IWY9 1227 aa11.19□□□□□ -0.62
SPTA1-206ENST00000484520 PDAP1Q13442 181 aaKnown RBP11.17□□□□□ -0.62
SPTA1-206ENST00000484520 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.17□□□□□ -0.62
SPTA1-206ENST00000484520 L3MBTL3Q96JM7 780 aaPredicted RBP11.15□□□□□ -0.62
SPTA1-206ENST00000484520 C3orf67Q6ZVT6 689 aa11.14□□□□□ -0.63
SPTA1-206ENST00000484520 SNPHO15079 494 aa11.13□□□□□ -0.63
SPTA1-206ENST00000484520 CABP2Q9NPB3 220 aa11.11□□□□□ -0.63
SPTA1-206ENST00000484520 DPY19L2Q6NUT2 758 aa11.09□□□□□ -0.63
SPTA1-206ENST00000484520 TMEM121BQ9BXQ6 578 aaPredicted RBP11.09□□□□□ -0.63
SPTA1-206ENST00000484520 ILDR1Q86SU0 546 aaPredicted RBP11.08□□□□□ -0.64
SPTA1-206ENST00000484520 MARVELD3Q96A59 401 aa11.07□□□□□ -0.64
SPTA1-206ENST00000484520 G3V3G9 751 aa11□□□□□ -0.65
SPTA1-206ENST00000484520 TRIM41Q8WV44 630 aa11□□□□□ -0.65
SPTA1-206ENST00000484520 BOLA1Q9Y3E2 137 aa11□□□□□ -0.65
SPTA1-206ENST00000484520 EFCAB3Q8N7B9 438 aa10.97□□□□□ -0.65
SPTA1-206ENST00000484520 EMP3P54852 163 aa10.96□□□□□ -0.65
SPTA1-206ENST00000484520 SPNS2Q8IVW8 549 aa10.92□□□□□ -0.66
SPTA1-206ENST00000484520 FAM205CA6NFA0 338 aa10.9□□□□□ -0.66
SPTA1-206ENST00000484520 RNF25Q96BH1 459 aaPredicted RBP10.9□□□□□ -0.66
SPTA1-206ENST00000484520 POTEB3A0JP26 581 aa10.89□□□□□ -0.67
SPTA1-206ENST00000484520 RIOK3O14730 519 aaKnown RBP10.89□□□□□ -0.67
SPTA1-206ENST00000484520 HOXB3P14651 431 aaPredicted RBP10.89□□□□□ -0.67
SPTA1-206ENST00000484520 MMRN1Q13201 1228 aa10.89□□□□□ -0.67
SPTA1-206ENST00000484520 POTEBQ6S5H4 581 aa10.89□□□□□ -0.67
SPTA1-206ENST00000484520 HS3ST6Q96QI5 342 aa10.89□□□□□ -0.67
SPTA1-206ENST00000484520 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.87□□□□□ -0.67
SPTA1-206ENST00000484520 ZFP91Q96JP5 570 aaPredicted RBP10.87□□□□□ -0.67
SPTA1-206ENST00000484520 VGFO15240 615 aaPredicted RBP10.84□□□□□ -0.67
SPTA1-206ENST00000484520 ZNF710Q8N1W2 664 aa10.84□□□□□ -0.67
SPTA1-206ENST00000484520 SOX12O15370 315 aa10.83□□□□□ -0.68
SPTA1-206ENST00000484520 MICALL2Q8IY33 904 aa10.83□□□□□ -0.68
SPTA1-206ENST00000484520 KRTAP3-3Q9BYR6 98 aa10.83□□□□□ -0.68
SPTA1-206ENST00000484520 KRTAP3-2Q9BYR7 98 aa10.83□□□□□ -0.68
SPTA1-206ENST00000484520 DOK7Q18PE1 504 aa10.82□□□□□ -0.68
SPTA1-206ENST00000484520 MS4A4AQ96JQ5 239 aa10.81□□□□□ -0.68
SPTA1-206ENST00000484520 PHF8Q9UPP1 1060 aa10.81□□□□□ -0.68
SPTA1-206ENST00000484520 HOXB1P14653 301 aaPredicted RBP10.8□□□□□ -0.68
SPTA1-206ENST00000484520 TMEM92Q6UXU6 159 aa10.8□□□□□ -0.68
SPTA1-206ENST00000484520 ERBB3P21860 1342 aa10.76□□□□□ -0.69
SPTA1-206ENST00000484520 RIMBP2O15034 1052 aa10.75□□□□□ -0.69
SPTA1-206ENST00000484520 BCL11BQ9C0K0 894 aaPredicted RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms