RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 RASEFQ8IZ41 740 aa16.59■□□□□ 0.25
CLK1-212ENST00000482590 PELP1Q8IZL8 1130 aaKnown RBP16.55■□□□□ 0.24
CLK1-212ENST00000482590 KIF12Q96FN5 646 aa16.53■□□□□ 0.24
CLK1-212ENST00000482590 ASTLQ6HA08 431 aaPredicted RBP16.5■□□□□ 0.23
CLK1-212ENST00000482590 ATMINO43313 823 aaPredicted RBP16.47■□□□□ 0.23
CLK1-212ENST00000482590 ZBTB47Q9UFB7 747 aaPredicted RBP16.47■□□□□ 0.23
CLK1-212ENST00000482590 POTEB2H3BUK9 544 aa16.45■□□□□ 0.22
CLK1-212ENST00000482590 NUBP1P53384 320 aa16.45■□□□□ 0.22
CLK1-212ENST00000482590 MAP3K13O43283 966 aa16.44■□□□□ 0.22
CLK1-212ENST00000482590 TRPC6Q9Y210 931 aa16.39■□□□□ 0.21
CLK1-212ENST00000482590 METRNQ9UJH8 293 aa16.37■□□□□ 0.21
CLK1-212ENST00000482590 FBXO3Q9UK99 471 aa16.37■□□□□ 0.21
CLK1-212ENST00000482590 ATN1P54259 1190 aaPredicted RBP16.36■□□□□ 0.21
CLK1-212ENST00000482590 SLC39A7Q92504 469 aa16.35■□□□□ 0.21
CLK1-212ENST00000482590 OTUD5Q96G74 571 aa16.35■□□□□ 0.21
CLK1-212ENST00000482590 C7P10643 843 aa16.34■□□□□ 0.21
CLK1-212ENST00000482590 BMP2KQ9NSY1 1161 aaPredicted RBP16.34■□□□□ 0.21
CLK1-212ENST00000482590 FAM212AQ96EL1 285 aa16.29■□□□□ 0.2
CLK1-212ENST00000482590 TIE1P35590 1138 aa16.28■□□□□ 0.2
CLK1-212ENST00000482590 SGIP1Q9BQI5 828 aa16.26■□□□□ 0.19
CLK1-212ENST00000482590 PCDHB13Q9Y5F0 798 aa16.26■□□□□ 0.19
CLK1-212ENST00000482590 POTEJP0CG39 1038 aa16.23■□□□□ 0.19
CLK1-212ENST00000482590 TTLL13PA6NNM8 815 aa16.22■□□□□ 0.19
CLK1-212ENST00000482590 VASPP50552 380 aaPredicted RBP16.21■□□□□ 0.19
CLK1-212ENST00000482590 IFNL1Q8IU54 200 aa16.2■□□□□ 0.18
CLK1-212ENST00000482590 POTEFA5A3E0 1075 aa16.17■□□□□ 0.18
CLK1-212ENST00000482590 DCAF8Q5TAQ9 597 aa16.17■□□□□ 0.18
CLK1-212ENST00000482590 KLHL34Q8N239 644 aa16.11■□□□□ 0.17
CLK1-212ENST00000482590 PYGBP11216 843 aa16.1■□□□□ 0.17
CLK1-212ENST00000482590 TRIM35Q9UPQ4 493 aa16.1■□□□□ 0.17
CLK1-212ENST00000482590 COLQQ9Y215 455 aaPredicted RBP16.08■□□□□ 0.16
CLK1-212ENST00000482590 MAMSTRQ6ZN01 415 aa16.07■□□□□ 0.16
CLK1-212ENST00000482590 TMEM106CQ9BVX2 250 aa16.06■□□□□ 0.16
CLK1-212ENST00000482590 SEC24BO95487 1268 aa16.03■□□□□ 0.16
CLK1-212ENST00000482590 IER5LQ5T953 404 aa16.03■□□□□ 0.16
CLK1-212ENST00000482590 SCUBE2Q9NQ36 999 aa16■□□□□ 0.15
CLK1-212ENST00000482590 PCDHB8Q9UN66 801 aa15.99■□□□□ 0.15
CLK1-212ENST00000482590 GSE1Q14687 1217 aa15.98■□□□□ 0.15
CLK1-212ENST00000482590 IFNLR1Q8IU57 520 aaPredicted RBP15.94■□□□□ 0.14
CLK1-212ENST00000482590 CHRM1P11229 460 aaPredicted RBP15.88■□□□□ 0.13
CLK1-212ENST00000482590 IRX5P78411 483 aaPredicted RBP15.87■□□□□ 0.13
CLK1-212ENST00000482590 SPOCK2Q92563 424 aa15.87■□□□□ 0.13
CLK1-212ENST00000482590 POTEMA6NI47 508 aa15.85■□□□□ 0.13
CLK1-212ENST00000482590 PLCG2P16885 1265 aa15.85■□□□□ 0.13
CLK1-212ENST00000482590 ZNF467Q7Z7K2 595 aaPredicted RBP15.84■□□□□ 0.13
CLK1-212ENST00000482590 POTEGQ6S5H5 508 aa15.82■□□□□ 0.12
CLK1-212ENST00000482590 LCE2DQ5TA82 110 aaPredicted RBP15.81■□□□□ 0.12
CLK1-212ENST00000482590 FAM163AQ96GL9 167 aaPredicted RBP15.78■□□□□ 0.12
CLK1-212ENST00000482590 OCEL1Q9H607 264 aa15.78■□□□□ 0.12
CLK1-212ENST00000482590 CIZ1Q9ULV3 898 aaPredicted RBP15.77■□□□□ 0.12
CLK1-212ENST00000482590 PSEN1P49768 467 aa15.73■□□□□ 0.11
CLK1-212ENST00000482590 SLAIN1Q8ND83 568 aa15.7■□□□□ 0.1
CLK1-212ENST00000482590 PLSCR2Q9NRY7 297 aa15.68■□□□□ 0.1
CLK1-212ENST00000482590 PDCD7Q8N8D1 485 aaKnown RBP15.66■□□□□ 0.1
CLK1-212ENST00000482590 GOLGA2Q08379 1002 aa15.65■□□□□ 0.1
CLK1-212ENST00000482590 MKRN3Q13064 507 aaKnown RBP15.65■□□□□ 0.1
CLK1-212ENST00000482590 PDAP1Q13442 181 aaKnown RBP15.65■□□□□ 0.1
CLK1-212ENST00000482590 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.58■□□□□ 0.087e-21■■■□□ 16.7
CLK1-212ENST00000482590 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.56■□□□□ 0.08
CLK1-212ENST00000482590 PCDH10Q9P2E7 1040 aa15.56■□□□□ 0.08
CLK1-212ENST00000482590 CABP2Q9NPB3 220 aa15.54■□□□□ 0.08
CLK1-212ENST00000482590 ILDR1Q86SU0 546 aaPredicted RBP15.53■□□□□ 0.08
CLK1-212ENST00000482590 TRIM41Q8WV44 630 aa15.53■□□□□ 0.08
CLK1-212ENST00000482590 ST18O60284 1047 aa15.51■□□□□ 0.07
CLK1-212ENST00000482590 L3MBTL3Q96JM7 780 aaPredicted RBP15.5■□□□□ 0.07
CLK1-212ENST00000482590 NISCHQ9Y2I1 1504 aa15.48■□□□□ 0.07
CLK1-212ENST00000482590 DPY19L2Q6NUT2 758 aa15.47■□□□□ 0.07
CLK1-212ENST00000482590 C3orf67Q6ZVT6 689 aa15.46■□□□□ 0.07
CLK1-212ENST00000482590 SNPHO15079 494 aa15.4■□□□□ 0.06
CLK1-212ENST00000482590 RNF25Q96BH1 459 aaPredicted RBP15.4■□□□□ 0.06
CLK1-212ENST00000482590 EFCAB3Q8N7B9 438 aa15.37■□□□□ 0.05
CLK1-212ENST00000482590 RIOK3O14730 519 aaKnown RBP15.36■□□□□ 0.05
CLK1-212ENST00000482590 CDAN1Q8IWY9 1227 aa15.36■□□□□ 0.05
CLK1-212ENST00000482590 BOLA1Q9Y3E2 137 aa15.34■□□□□ 0.05
CLK1-212ENST00000482590 TMEM121BQ9BXQ6 578 aaPredicted RBP15.33■□□□□ 0.04
CLK1-212ENST00000482590 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.29■□□□□ 0.04
CLK1-212ENST00000482590 ZFP91Q96JP5 570 aaPredicted RBP15.29■□□□□ 0.04
CLK1-212ENST00000482590 G3V3G9 751 aa15.28■□□□□ 0.04
CLK1-212ENST00000482590 VGFO15240 615 aaPredicted RBP15.28■□□□□ 0.04
CLK1-212ENST00000482590 MARVELD3Q96A59 401 aa15.27■□□□□ 0.04
CLK1-212ENST00000482590 SOX12O15370 315 aa15.21■□□□□ 0.03
CLK1-212ENST00000482590 MS4A4AQ96JQ5 239 aa15.18■□□□□ 0.02
CLK1-212ENST00000482590 PHF8Q9UPP1 1060 aa15.17■□□□□ 0.02
CLK1-212ENST00000482590 HOXB3P14651 431 aaPredicted RBP15.15■□□□□ 0.02
CLK1-212ENST00000482590 EMP3P54852 163 aa15.14■□□□□ 0.01
CLK1-212ENST00000482590 MICALL2Q8IY33 904 aa15.14■□□□□ 0.01
CLK1-212ENST00000482590 BCL11BQ9C0K0 894 aaPredicted RBP15.12■□□□□ 0.01
CLK1-212ENST00000482590 ECM2O94769 699 aaPredicted RBP15.1■□□□□ 0.01
CLK1-212ENST00000482590 TMEM92Q6UXU6 159 aa15.09■□□□□ 0.01
CLK1-212ENST00000482590 TAOK2Q9UL54 1235 aa15.09■□□□□ 0.01
CLK1-212ENST00000482590 POTEB3A0JP26 581 aa15.08■□□□□ 0
CLK1-212ENST00000482590 POTEBQ6S5H4 581 aa15.08■□□□□ 0
CLK1-212ENST00000482590 PKD2Q13563 968 aa15.07■□□□□ 0
CLK1-212ENST00000482590 STK24Q9Y6E0 443 aa15.06■□□□□ 0
CLK1-212ENST00000482590 FAM205CA6NFA0 338 aa15.05■□□□□ -0
CLK1-212ENST00000482590 FBXO22Q8NEZ5 403 aa15.04■□□□□ -0
CLK1-212ENST00000482590 HS3ST6Q96QI5 342 aa15.04■□□□□ -0
CLK1-212ENST00000482590 NLRP6P59044 892 aa15.03■□□□□ -0
CLK1-212ENST00000482590 DOK7Q18PE1 504 aa15.02■□□□□ -0
CLK1-212ENST00000482590 ZNF710Q8N1W2 664 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms