RNA–Protein interactions for RNA: ENST00000481474.5

TRIM27-205, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best)

Gene TRIM27, Length 7,006 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-205ENST00000481474 UPF2Q9HAU5 1272 aaKnown RBP15.61■□□□□ 0.09
TRIM27-205ENST00000481474 GOLGA2Q08379 1002 aa15.6■□□□□ 0.09
TRIM27-205ENST00000481474 KDM2AQ9Y2K7 1162 aa15.58■□□□□ 0.09
TRIM27-205ENST00000481474 NCLP19338 710 aaKnown RBP15.58■□□□□ 0.08
TRIM27-205ENST00000481474 WWC1Q8IX03 1113 aa15.58■□□□□ 0.08
TRIM27-205ENST00000481474 FAM9BQ8IZU0 186 aa15.55■□□□□ 0.08
TRIM27-205ENST00000481474 SOX12O15370 315 aa15.55■□□□□ 0.08
TRIM27-205ENST00000481474 CCDC9Q9Y3X0 531 aaKnown RBP15.55■□□□□ 0.08
TRIM27-205ENST00000481474 PHF23Q9BUL5 403 aaPredicted RBP15.54■□□□□ 0.08
TRIM27-205ENST00000481474 ZRSR1Q15695 479 aaKnown RBP15.54■□□□□ 0.08
TRIM27-205ENST00000481474 LAS1LQ9Y4W2 734 aaKnown RBP15.54■□□□□ 0.08
TRIM27-205ENST00000481474 PLCB2Q00722 1185 aa15.53■□□□□ 0.08
TRIM27-205ENST00000481474 MYH16Q9H6N6 1097 aa15.5■□□□□ 0.07
TRIM27-205ENST00000481474 KLHL34Q8N239 644 aa15.5■□□□□ 0.07
TRIM27-205ENST00000481474 ZNF330Q9Y3S2 320 aaPredicted RBP15.5■□□□□ 0.07
TRIM27-205ENST00000481474 ERICH6BQ5W0A0 696 aa15.49■□□□□ 0.07
TRIM27-205ENST00000481474 TMC1Q8TDI8 760 aa15.48■□□□□ 0.07
TRIM27-205ENST00000481474 AEBP2Q6ZN18 517 aaPredicted RBP15.46■□□□□ 0.07
TRIM27-205ENST00000481474 RTN4Q9NQC3 1192 aaKnown RBP15.42■□□□□ 0.06
TRIM27-205ENST00000481474 KCNH8Q96L42 1107 aa15.42■□□□□ 0.06
TRIM27-205ENST00000481474 DNTTIP2Q5QJE6 756 aaKnown RBP15.42■□□□□ 0.06
TRIM27-205ENST00000481474 CNKSR2Q8WXI2 1034 aa15.41■□□□□ 0.06
TRIM27-205ENST00000481474 TRIM44Q96DX7 344 aaPredicted RBP15.41■□□□□ 0.06
TRIM27-205ENST00000481474 WDR43Q15061 677 aaKnown RBP eCLIP15.4■□□□□ 0.06
TRIM27-205ENST00000481474 FGD1P98174 961 aa15.4■□□□□ 0.06
TRIM27-205ENST00000481474 CHIC2Q9UKJ5 165 aa15.39■□□□□ 0.05
TRIM27-205ENST00000481474 MLECQ14165 292 aa15.39■□□□□ 0.05
TRIM27-205ENST00000481474 PTMAP06454 111 aaKnown RBP15.38■□□□□ 0.05
TRIM27-205ENST00000481474 IRX6P78412 446 aaPredicted RBP15.37■□□□□ 0.05
TRIM27-205ENST00000481474 OS9Q13438 667 aaPredicted RBP15.37■□□□□ 0.05
TRIM27-205ENST00000481474 FKBP8Q14318 412 aa15.37■□□□□ 0.05
TRIM27-205ENST00000481474 G3V3G9 751 aa15.35■□□□□ 0.05
TRIM27-205ENST00000481474 DCAF8Q5TAQ9 597 aa15.35■□□□□ 0.05
TRIM27-205ENST00000481474 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.34■□□□□ 0.05
TRIM27-205ENST00000481474 MSH5O43196 834 aa15.34■□□□□ 0.05
TRIM27-205ENST00000481474 NEUROD2Q15784 382 aa15.31■□□□□ 0.04
TRIM27-205ENST00000481474 TNNT2P45379 298 aaPredicted RBP15.31■□□□□ 0.04
TRIM27-205ENST00000481474 KCNJ4P48050 445 aa15.28■□□□□ 0.04
TRIM27-205ENST00000481474 TMX4Q9H1E5 349 aaPredicted RBP15.28■□□□□ 0.04
TRIM27-205ENST00000481474 HNRNPUQ00839 825 aaKnown RBP eCLIP15.28■□□□□ 0.04
TRIM27-205ENST00000481474 VPS53Q5VIR6 699 aa15.27■□□□□ 0.03
TRIM27-205ENST00000481474 NOC3LQ8WTT2 800 aaKnown RBP15.25■□□□□ 0.03
TRIM27-205ENST00000481474 ARID3AQ99856 593 aa15.24■□□□□ 0.03
TRIM27-205ENST00000481474 HIRIP3Q9BW71 556 aaPredicted RBP15.24■□□□□ 0.03
TRIM27-205ENST00000481474 RGL3Q3MIN7 710 aa15.22■□□□□ 0.03
TRIM27-205ENST00000481474 CREBRFQ8IUR6 639 aa15.2■□□□□ 0.02
TRIM27-205ENST00000481474 CCDC136Q96JN2 1154 aa15.2■□□□□ 0.02
TRIM27-205ENST00000481474 WDR70Q9NW82 654 aa15.19■□□□□ 0.02
TRIM27-205ENST00000481474 PAK3O75914 559 aaPredicted RBP15.18■□□□□ 0.02
TRIM27-205ENST00000481474 RAD21O60216 631 aa15.17■□□□□ 0.02
TRIM27-205ENST00000481474 SAMD1Q6SPF0 538 aaPredicted RBP15.16■□□□□ 0.02
TRIM27-205ENST00000481474 PNNQ9H307 717 aaKnown RBP15.16■□□□□ 0.02
TRIM27-205ENST00000481474 GNL2Q13823 731 aaKnown RBP15.16■□□□□ 0.02
TRIM27-205ENST00000481474 NAP1L5Q96NT1 182 aaPredicted RBP15.15■□□□□ 0.02
TRIM27-205ENST00000481474 DCAF8L1A6NGE4 600 aa15.15■□□□□ 0.02
TRIM27-205ENST00000481474 VSIG10Q8N0Z9 540 aa15.14■□□□□ 0.01
TRIM27-205ENST00000481474 CSB-PGBD3P0DP91 1061 aa15.14■□□□□ 0.01
TRIM27-205ENST00000481474 DDX10Q13206 875 aaKnown RBP15.13■□□□□ 0.01
TRIM27-205ENST00000481474 APBB1O00213 710 aa15.12■□□□□ 0.01
TRIM27-205ENST00000481474 CWC22Q9HCG8 908 aaKnown RBP15.12■□□□□ 0.01
TRIM27-205ENST00000481474 A0A0U1RQG5 324 aaPredicted RBP15.11■□□□□ 0.01
TRIM27-205ENST00000481474 SAFB2Q14151 953 aaKnown RBP eCLIP15.11■□□□□ 0.01
TRIM27-205ENST00000481474 CASC1Q6TDU7 716 aa15.1■□□□□ 0.01
TRIM27-205ENST00000481474 PPP1R1BQ9UD71 204 aaPredicted RBP15.1■□□□□ 0.01
TRIM27-205ENST00000481474 CHMP3Q9Y3E7 222 aa15.1■□□□□ 0.01
TRIM27-205ENST00000481474 FTSJ3Q8IY81 847 aaKnown RBP15.09■□□□□ 0.01
TRIM27-205ENST00000481474 POGKQ9P215 609 aa15.09■□□□□ 0.01
TRIM27-205ENST00000481474 SPRYD3Q8NCJ5 442 aa15.08■□□□□ 0.01
TRIM27-205ENST00000481474 MEX3CQ5U5Q3 659 aaKnown RBP15.08■□□□□ 0
TRIM27-205ENST00000481474 DRC7Q8IY82 874 aa15.08■□□□□ 0
TRIM27-205ENST00000481474 KIAA2012Q0VF49 1180 aa15.06■□□□□ 0
TRIM27-205ENST00000481474 FBXW7Q969H0 707 aa15.06■□□□□ 0
TRIM27-205ENST00000481474 PATL2C9JE40 543 aaKnown RBP15.06■□□□□ 0
TRIM27-205ENST00000481474 U2SURPO15042 1029 aaKnown RBP15.05■□□□□ -0
TRIM27-205ENST00000481474 GOLGA6L22H0YM25 854 aa15.04■□□□□ -0
TRIM27-205ENST00000481474 FRAT2O75474 233 aaPredicted RBP15.03■□□□□ -0
TRIM27-205ENST00000481474 FRAT1Q92837 279 aaPredicted RBP15.03■□□□□ -0
TRIM27-205ENST00000481474 GOLGA6L4A6NEF3 574 aa15.02□□□□□ -0.01
TRIM27-205ENST00000481474 ABCC9O60706 1549 aa15.01□□□□□ -0.01
TRIM27-205ENST00000481474 GTF2E1P29083 439 aaPredicted RBP15□□□□□ -0.01
TRIM27-205ENST00000481474 TONSLQ96HA7 1378 aa15□□□□□ -0.01
TRIM27-205ENST00000481474 CHMP7Q8WUX9 453 aaPredicted RBP14.99□□□□□ -0.01
TRIM27-205ENST00000481474 GOLGA6L6A8MZA4 724 aa14.99□□□□□ -0.01
TRIM27-205ENST00000481474 RASSF8Q8NHQ8 419 aa14.98□□□□□ -0.01
TRIM27-205ENST00000481474 TSPY4P0CV99 314 aa14.98□□□□□ -0.01
TRIM27-205ENST00000481474 TSPY10P0CW01 314 aa14.98□□□□□ -0.01
TRIM27-205ENST00000481474 MARCH6O60337 910 aa14.98□□□□□ -0.01
TRIM27-205ENST00000481474 HSP90B1P14625 803 aaKnown RBP14.97□□□□□ -0.01
TRIM27-205ENST00000481474 MRS2Q9HD23 443 aa14.96□□□□□ -0.01
TRIM27-205ENST00000481474 TAF7LQ5H9L4 462 aa14.96□□□□□ -0.01
TRIM27-205ENST00000481474 IBSPP21815 317 aaPredicted RBP14.96□□□□□ -0.02
TRIM27-205ENST00000481474 PPM1FP49593 454 aaPredicted RBP14.95□□□□□ -0.02
TRIM27-205ENST00000481474 EIF4G2P78344 907 aaKnown RBP eCLIP14.95□□□□□ -0.02
TRIM27-205ENST00000481474 TOMM22Q9NS69 142 aa14.94□□□□□ -0.02
TRIM27-205ENST00000481474 MAPK8IP3Q9UPT6 1336 aa14.94□□□□□ -0.02
TRIM27-205ENST00000481474 HSP90AB1P08238 724 aaKnown RBP14.94□□□□□ -0.02
TRIM27-205ENST00000481474 GORABQ5T7V8 394 aa14.93□□□□□ -0.02
TRIM27-205ENST00000481474 CTDP1Q9Y5B0 961 aaPredicted RBP14.93□□□□□ -0.02
TRIM27-205ENST00000481474 RGS3P49796 1198 aa14.93□□□□□ -0.02
TRIM27-205ENST00000481474 STK26Q9P289 416 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms