RNA–Protein interactions for RNA: ENST00000480112.5

CDK5RAP2-212, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 5,826 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-212ENST00000480112 ESF1Q9H501 851 aaKnown RBP16.81■□□□□ 0.28
CDK5RAP2-212ENST00000480112 TSPY4P0CV99 314 aa16.8■□□□□ 0.28
CDK5RAP2-212ENST00000480112 TSPY10P0CW01 314 aa16.8■□□□□ 0.28
CDK5RAP2-212ENST00000480112 ARID3CA6NKF2 412 aa16.8■□□□□ 0.28
CDK5RAP2-212ENST00000480112 STAG3Q9UJ98 1225 aa16.79■□□□□ 0.28
CDK5RAP2-212ENST00000480112 CDCA8Q53HL2 280 aa16.78■□□□□ 0.28
CDK5RAP2-212ENST00000480112 NOP58Q9Y2X3 529 aaKnown RBP16.77■□□□□ 0.28
CDK5RAP2-212ENST00000480112 ARXQ96QS3 562 aa16.77■□□□□ 0.28
CDK5RAP2-212ENST00000480112 CHGAP10645 457 aaKnown RBP16.76■□□□□ 0.27
CDK5RAP2-212ENST00000480112 CASC1Q6TDU7 716 aa16.76■□□□□ 0.27
CDK5RAP2-212ENST00000480112 IRX6P78412 446 aaPredicted RBP16.76■□□□□ 0.27
CDK5RAP2-212ENST00000480112 CDK11BP21127 795 aaKnown RBP16.75■□□□□ 0.27
CDK5RAP2-212ENST00000480112 CEP162Q5TB80 1403 aa16.75■□□□□ 0.27
CDK5RAP2-212ENST00000480112 CHMP4BQ9H444 224 aaKnown RBP16.73■□□□□ 0.27
CDK5RAP2-212ENST00000480112 PTMAP06454 111 aaKnown RBP16.72■□□□□ 0.27
CDK5RAP2-212ENST00000480112 CHIC2Q9UKJ5 165 aa16.72■□□□□ 0.27
CDK5RAP2-212ENST00000480112 CFAP53Q96M91 514 aa16.71■□□□□ 0.27
CDK5RAP2-212ENST00000480112 TNIKQ9UKE5 1360 aa16.7■□□□□ 0.26
CDK5RAP2-212ENST00000480112 TIMELESSQ9UNS1 1208 aa16.69■□□□□ 0.26
CDK5RAP2-212ENST00000480112 MS4A1P11836 297 aa16.69■□□□□ 0.26
CDK5RAP2-212ENST00000480112 L1TD1Q5T7N2 865 aaKnown RBP16.68■□□□□ 0.26
CDK5RAP2-212ENST00000480112 SUPT16HQ9Y5B9 1047 aaKnown RBP16.67■□□□□ 0.26
CDK5RAP2-212ENST00000480112 ZRSR1Q15695 479 aaKnown RBP16.67■□□□□ 0.26
CDK5RAP2-212ENST00000480112 NAP1L5Q96NT1 182 aaPredicted RBP16.66■□□□□ 0.26
CDK5RAP2-212ENST00000480112 KDM2AQ9Y2K7 1162 aa16.65■□□□□ 0.26
CDK5RAP2-212ENST00000480112 CEP164Q9UPV0 1460 aa16.65■□□□□ 0.26
CDK5RAP2-212ENST00000480112 CCER2I3L3R5 266 aa16.65■□□□□ 0.26
CDK5RAP2-212ENST00000480112 NPM1P06748 294 aaKnown RBP eCLIP16.64■□□□□ 0.25
CDK5RAP2-212ENST00000480112 DNTTIP2Q5QJE6 756 aaKnown RBP16.64■□□□□ 0.25
CDK5RAP2-212ENST00000480112 GOLGA6L6A8MZA4 724 aa16.63■□□□□ 0.25
CDK5RAP2-212ENST00000480112 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.63■□□□□ 0.254e-7■■■□□ 16.6
CDK5RAP2-212ENST00000480112 CFAP44Q96MT7 982 aa16.62■□□□□ 0.25
CDK5RAP2-212ENST00000480112 MYO15BQ96JP2 1530 aa16.61■□□□□ 0.25
CDK5RAP2-212ENST00000480112 KNSTRNQ9Y448 316 aa16.61■□□□□ 0.25
CDK5RAP2-212ENST00000480112 PTMSP20962 102 aa16.6■□□□□ 0.25
CDK5RAP2-212ENST00000480112 FTSJ3Q8IY81 847 aaKnown RBP16.6■□□□□ 0.25
CDK5RAP2-212ENST00000480112 NRDCO43847 1150 aa16.58■□□□□ 0.24
CDK5RAP2-212ENST00000480112 HIRIP3Q9BW71 556 aaPredicted RBP16.54■□□□□ 0.24
CDK5RAP2-212ENST00000480112 RRP7BPQ9NSQ0 103 aa16.54■□□□□ 0.24
CDK5RAP2-212ENST00000480112 CHAF1AQ13111 956 aaPredicted RBP16.53■□□□□ 0.24
CDK5RAP2-212ENST00000480112 LAS1LQ9Y4W2 734 aaKnown RBP16.53■□□□□ 0.24
CDK5RAP2-212ENST00000480112 PNNQ9H307 717 aaKnown RBP16.53■□□□□ 0.24
CDK5RAP2-212ENST00000480112 NUDCQ9Y266 331 aa16.52■□□□□ 0.24
CDK5RAP2-212ENST00000480112 HSP90AB1P08238 724 aaKnown RBP16.52■□□□□ 0.24
CDK5RAP2-212ENST00000480112 CARD11Q9BXL7 1154 aa16.51■□□□□ 0.23
CDK5RAP2-212ENST00000480112 DEKP35659 375 aaKnown RBP16.51■□□□□ 0.23
CDK5RAP2-212ENST00000480112 WRNQ14191 1432 aaPredicted RBP eCLIP16.51■□□□□ 0.23
CDK5RAP2-212ENST00000480112 HSCBQ8IWL3 235 aa16.5■□□□□ 0.23
CDK5RAP2-212ENST00000480112 KIF27Q86VH2 1401 aa16.5■□□□□ 0.23
CDK5RAP2-212ENST00000480112 MAPK8IP3Q9UPT6 1336 aa16.5■□□□□ 0.23
CDK5RAP2-212ENST00000480112 MSNP26038 577 aaKnown RBP16.49■□□□□ 0.23
CDK5RAP2-212ENST00000480112 PLEKHD1A6NEE1 506 aa16.46■□□□□ 0.23
CDK5RAP2-212ENST00000480112 FHAD1B1AJZ9 1412 aa16.46■□□□□ 0.23
CDK5RAP2-212ENST00000480112 RBM19Q9Y4C8 960 aaKnown RBP16.45■□□□□ 0.22
CDK5RAP2-212ENST00000480112 CCNB3Q8WWL7 1395 aa16.43■□□□□ 0.22
CDK5RAP2-212ENST00000480112 RGS3P49796 1198 aa16.43■□□□□ 0.22
CDK5RAP2-212ENST00000480112 ARID4BQ4LE39 1312 aaPredicted RBP16.43■□□□□ 0.22
CDK5RAP2-212ENST00000480112 RB1CC1Q8TDY2 1594 aa16.42■□□□□ 0.22
CDK5RAP2-212ENST00000480112 TCERG1O14776 1098 aaKnown RBP16.41■□□□□ 0.22
CDK5RAP2-212ENST00000480112 MCCP23508 829 aa16.41■□□□□ 0.22
CDK5RAP2-212ENST00000480112 HAP1P54257 671 aaPredicted RBP16.4■□□□□ 0.22
CDK5RAP2-212ENST00000480112 B4GALNT3Q6L9W6 998 aa16.39■□□□□ 0.22
CDK5RAP2-212ENST00000480112 RTN4Q9NQC3 1192 aaKnown RBP16.39■□□□□ 0.22
CDK5RAP2-212ENST00000480112 CHMP7Q8WUX9 453 aaPredicted RBP16.39■□□□□ 0.21
CDK5RAP2-212ENST00000480112 GBP4Q96PP9 640 aa16.38■□□□□ 0.21
CDK5RAP2-212ENST00000480112 CFDP1Q9UEE9 299 aaPredicted RBP16.38■□□□□ 0.21
CDK5RAP2-212ENST00000480112 TMF1P82094 1093 aa16.37■□□□□ 0.21
CDK5RAP2-212ENST00000480112 PPP1R15AO75807 674 aaPredicted RBP16.36■□□□□ 0.21
CDK5RAP2-212ENST00000480112 GOLGA6L4A6NEF3 574 aa16.35■□□□□ 0.21
CDK5RAP2-212ENST00000480112 SETD5Q9C0A6 1442 aa16.34■□□□□ 0.21
CDK5RAP2-212ENST00000480112 FRAT1Q92837 279 aaPredicted RBP16.34■□□□□ 0.21
CDK5RAP2-212ENST00000480112 PLCB2Q00722 1185 aa16.33■□□□□ 0.2
CDK5RAP2-212ENST00000480112 RGL3Q3MIN7 710 aa16.32■□□□□ 0.2
CDK5RAP2-212ENST00000480112 SIN3AQ96ST3 1273 aa16.3■□□□□ 0.2
CDK5RAP2-212ENST00000480112 KIAA2012Q0VF49 1180 aa16.3■□□□□ 0.2
CDK5RAP2-212ENST00000480112 KTN1Q86UP2 1357 aaKnown RBP16.3■□□□□ 0.2
CDK5RAP2-212ENST00000480112 SYAP1Q96A49 352 aaPredicted RBP16.3■□□□□ 0.2
CDK5RAP2-212ENST00000480112 USP35Q9P2H5 1018 aa16.29■□□□□ 0.2
CDK5RAP2-212ENST00000480112 RALBP1Q15311 655 aa16.29■□□□□ 0.2
CDK5RAP2-212ENST00000480112 NACADO15069 1562 aa16.29■□□□□ 0.2
CDK5RAP2-212ENST00000480112 BAZ1BQ9UIG0 1483 aaKnown RBP16.28■□□□□ 0.2
CDK5RAP2-212ENST00000480112 IPO8O15397 1037 aaKnown RBP16.28■□□□□ 0.2
CDK5RAP2-212ENST00000480112 VPS8Q8N3P4 1428 aa16.27■□□□□ 0.2
CDK5RAP2-212ENST00000480112 FGD1P98174 961 aa16.27■□□□□ 0.2
CDK5RAP2-212ENST00000480112 IPO9Q96P70 1041 aaKnown RBP16.27■□□□□ 0.2
CDK5RAP2-212ENST00000480112 HTATSF1O43719 755 aaKnown RBP16.26■□□□□ 0.19
CDK5RAP2-212ENST00000480112 KCNJ4P48050 445 aa16.26■□□□□ 0.19
CDK5RAP2-212ENST00000480112 RWDD1Q9H446 243 aaPredicted RBP16.26■□□□□ 0.19
CDK5RAP2-212ENST00000480112 OS9Q13438 667 aaPredicted RBP16.25■□□□□ 0.19
CDK5RAP2-212ENST00000480112 NEUROD2Q15784 382 aa16.25■□□□□ 0.19
CDK5RAP2-212ENST00000480112 CC2D1BQ5T0F9 858 aaKnown RBP16.24■□□□□ 0.19
CDK5RAP2-212ENST00000480112 ARHGAP35Q9NRY4 1499 aa16.24■□□□□ 0.19
CDK5RAP2-212ENST00000480112 PMFBP1Q8TBY8 1022 aa16.24■□□□□ 0.19
CDK5RAP2-212ENST00000480112 CALD1Q05682 793 aaKnown RBP16.24■□□□□ 0.19
CDK5RAP2-212ENST00000480112 GOLGA6L3A6NEY3 463 aa16.23■□□□□ 0.19
CDK5RAP2-212ENST00000480112 TSHZ2Q9NRE2 1034 aa16.23■□□□□ 0.19
CDK5RAP2-212ENST00000480112 BAZ1AQ9NRL2 1556 aaPredicted RBP16.23■□□□□ 0.19
CDK5RAP2-212ENST00000480112 RCAN3Q9UKA8 241 aa16.23■□□□□ 0.19
CDK5RAP2-212ENST00000480112 DRC7Q8IY82 874 aa16.23■□□□□ 0.19
CDK5RAP2-212ENST00000480112 PDE3BQ13370 1112 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms