RNA–Protein interactions for RNA: ENST00000478196.6

RPS27A-208, Transcript of ribosomal protein S27a, humanhuman

TSL 2

Gene RPS27A, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS27A-208ENST00000478196 OTUD5Q96G74 571 aa12.93□□□□□ -0.34
RPS27A-208ENST00000478196 CCDC61Q9Y6R9 512 aa12.93□□□□□ -0.34
RPS27A-208ENST00000478196 ATMINO43313 823 aaPredicted RBP12.9□□□□□ -0.34
RPS27A-208ENST00000478196 C7P10643 843 aa12.89□□□□□ -0.35
RPS27A-208ENST00000478196 SLC39A7Q92504 469 aa12.89□□□□□ -0.35
RPS27A-208ENST00000478196 METRNQ9UJH8 293 aa12.87□□□□□ -0.35
RPS27A-208ENST00000478196 KIF12Q96FN5 646 aa12.86□□□□□ -0.35
RPS27A-208ENST00000478196 PLCD3Q8N3E9 789 aa12.81□□□□□ -0.36
RPS27A-208ENST00000478196 RASEFQ8IZ41 740 aa12.8□□□□□ -0.36
RPS27A-208ENST00000478196 ATN1P54259 1190 aaPredicted RBP12.79□□□□□ -0.36
RPS27A-208ENST00000478196 MAP3K13O43283 966 aa12.77□□□□□ -0.37
RPS27A-208ENST00000478196 MAMSTRQ6ZN01 415 aa12.77□□□□□ -0.37
RPS27A-208ENST00000478196 ZBTB47Q9UFB7 747 aaPredicted RBP12.77□□□□□ -0.37
RPS27A-208ENST00000478196 BMP2KQ9NSY1 1161 aaPredicted RBP12.74□□□□□ -0.37
RPS27A-208ENST00000478196 TIE1P35590 1138 aa12.73□□□□□ -0.37
RPS27A-208ENST00000478196 POTEJP0CG39 1038 aa12.72□□□□□ -0.37
RPS27A-208ENST00000478196 TRPC6Q9Y210 931 aa12.71□□□□□ -0.37
RPS27A-208ENST00000478196 PLSCR2Q9NRY7 297 aa12.7□□□□□ -0.38
RPS27A-208ENST00000478196 SGIP1Q9BQI5 828 aa12.68□□□□□ -0.38
RPS27A-208ENST00000478196 SCUBE2Q9NQ36 999 aa12.67□□□□□ -0.38
RPS27A-208ENST00000478196 POTEMA6NI47 508 aa12.66□□□□□ -0.38
RPS27A-208ENST00000478196 NUBP1P53384 320 aa12.66□□□□□ -0.38
RPS27A-208ENST00000478196 FKBP8Q14318 412 aa12.66□□□□□ -0.38
RPS27A-208ENST00000478196 TTLL13PA6NNM8 815 aa12.64□□□□□ -0.39
RPS27A-208ENST00000478196 PCDHB13Q9Y5F0 798 aa12.64□□□□□ -0.39
RPS27A-208ENST00000478196 POTEFA5A3E0 1075 aa12.63□□□□□ -0.39
RPS27A-208ENST00000478196 POTEGQ6S5H5 508 aa12.63□□□□□ -0.39
RPS27A-208ENST00000478196 FAM212AQ96EL1 285 aa12.61□□□□□ -0.39
RPS27A-208ENST00000478196 SEC24BO95487 1268 aa12.6□□□□□ -0.39
RPS27A-208ENST00000478196 IER5LQ5T953 404 aa12.57□□□□□ -0.4
RPS27A-208ENST00000478196 TRIM35Q9UPQ4 493 aa12.56□□□□□ -0.4
RPS27A-208ENST00000478196 COLQQ9Y215 455 aaPredicted RBP12.55□□□□□ -0.4
RPS27A-208ENST00000478196 IFNL1Q8IU54 200 aa12.54□□□□□ -0.4
RPS27A-208ENST00000478196 PCDH10Q9P2E7 1040 aa12.54□□□□□ -0.4
RPS27A-208ENST00000478196 FAM163AQ96GL9 167 aaPredicted RBP12.52□□□□□ -0.41
RPS27A-208ENST00000478196 FBXO3Q9UK99 471 aa12.52□□□□□ -0.41
RPS27A-208ENST00000478196 TMEM106CQ9BVX2 250 aa12.49□□□□□ -0.41
RPS27A-208ENST00000478196 DCAF8Q5TAQ9 597 aa12.47□□□□□ -0.41
RPS27A-208ENST00000478196 LCE2DQ5TA82 110 aaPredicted RBP12.46□□□□□ -0.41
RPS27A-208ENST00000478196 PYGBP11216 843 aa12.41□□□□□ -0.42
RPS27A-208ENST00000478196 PLCG2P16885 1265 aa12.41□□□□□ -0.42
RPS27A-208ENST00000478196 IRX5P78411 483 aaPredicted RBP12.36□□□□□ -0.43
RPS27A-208ENST00000478196 KLHL34Q8N239 644 aa12.35□□□□□ -0.43
RPS27A-208ENST00000478196 SLAIN1Q8ND83 568 aa12.35□□□□□ -0.43
RPS27A-208ENST00000478196 VASPP50552 380 aaPredicted RBP12.33□□□□□ -0.44
RPS27A-208ENST00000478196 GSE1Q14687 1217 aa12.33□□□□□ -0.44
RPS27A-208ENST00000478196 OCEL1Q9H607 264 aa12.33□□□□□ -0.44
RPS27A-208ENST00000478196 PCDHB8Q9UN66 801 aa12.33□□□□□ -0.44
RPS27A-208ENST00000478196 ZNF467Q7Z7K2 595 aaPredicted RBP12.27□□□□□ -0.45
RPS27A-208ENST00000478196 CHRM1P11229 460 aaPredicted RBP12.24□□□□□ -0.45
RPS27A-208ENST00000478196 ST18O60284 1047 aa12.23□□□□□ -0.45
RPS27A-208ENST00000478196 CDAN1Q8IWY9 1227 aa12.22□□□□□ -0.45
RPS27A-208ENST00000478196 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.22□□□□□ -0.45
RPS27A-208ENST00000478196 GOLGA2Q08379 1002 aa12.21□□□□□ -0.45
RPS27A-208ENST00000478196 SNPHO15079 494 aa12.19□□□□□ -0.46
RPS27A-208ENST00000478196 MKRN3Q13064 507 aaKnown RBP12.19□□□□□ -0.46
RPS27A-208ENST00000478196 PDCD7Q8N8D1 485 aaKnown RBP12.15□□□□□ -0.46
RPS27A-208ENST00000478196 TMEM121BQ9BXQ6 578 aaPredicted RBP12.15□□□□□ -0.46
RPS27A-208ENST00000478196 PSEN1P49768 467 aa12.14□□□□□ -0.47
RPS27A-208ENST00000478196 L3MBTL3Q96JM7 780 aaPredicted RBP12.14□□□□□ -0.47
RPS27A-208ENST00000478196 SPOCK2Q92563 424 aa12.11□□□□□ -0.47
RPS27A-208ENST00000478196 C3orf67Q6ZVT6 689 aa12.1□□□□□ -0.47
RPS27A-208ENST00000478196 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.1□□□□□ -0.47
RPS27A-208ENST00000478196 PDAP1Q13442 181 aaKnown RBP12.09□□□□□ -0.47
RPS27A-208ENST00000478196 IFNLR1Q8IU57 520 aaPredicted RBP12.07□□□□□ -0.48
RPS27A-208ENST00000478196 CIZ1Q9ULV3 898 aaPredicted RBP12.07□□□□□ -0.48
RPS27A-208ENST00000478196 ILDR1Q86SU0 546 aaPredicted RBP12.02□□□□□ -0.49
RPS27A-208ENST00000478196 MARVELD3Q96A59 401 aa12□□□□□ -0.49
RPS27A-208ENST00000478196 CABP2Q9NPB3 220 aa11.99□□□□□ -0.49
RPS27A-208ENST00000478196 G3V3G9 751 aa11.96□□□□□ -0.49
RPS27A-208ENST00000478196 DPY19L2Q6NUT2 758 aa11.95□□□□□ -0.5
RPS27A-208ENST00000478196 TRIM41Q8WV44 630 aa11.94□□□□□ -0.5
RPS27A-208ENST00000478196 EMP3P54852 163 aa11.93□□□□□ -0.5
RPS27A-208ENST00000478196 BOLA1Q9Y3E2 137 aa11.93□□□□□ -0.5
RPS27A-208ENST00000478196 SPNS2Q8IVW8 549 aa11.91□□□□□ -0.5
RPS27A-208ENST00000478196 MMRN1Q13201 1228 aa11.89□□□□□ -0.51
RPS27A-208ENST00000478196 FAM205CA6NFA0 338 aa11.84□□□□□ -0.51
RPS27A-208ENST00000478196 HS3ST6Q96QI5 342 aa11.84□□□□□ -0.51
RPS27A-208ENST00000478196 EFCAB3Q8N7B9 438 aa11.83□□□□□ -0.52
RPS27A-208ENST00000478196 HOXB3P14651 431 aaPredicted RBP11.8□□□□□ -0.52
RPS27A-208ENST00000478196 POTEB3A0JP26 581 aa11.79□□□□□ -0.52
RPS27A-208ENST00000478196 POTEBQ6S5H4 581 aa11.79□□□□□ -0.52
RPS27A-208ENST00000478196 ZNF710Q8N1W2 664 aa11.79□□□□□ -0.52
RPS27A-208ENST00000478196 DOK7Q18PE1 504 aa11.78□□□□□ -0.52
RPS27A-208ENST00000478196 KRTAP3-3Q9BYR6 98 aa11.77□□□□□ -0.53
RPS27A-208ENST00000478196 KRTAP3-2Q9BYR7 98 aa11.77□□□□□ -0.53
RPS27A-208ENST00000478196 RIOK3O14730 519 aaKnown RBP11.75□□□□□ -0.53
RPS27A-208ENST00000478196 SOX12O15370 315 aa11.75□□□□□ -0.53
RPS27A-208ENST00000478196 HOXB1P14653 301 aaPredicted RBP11.75□□□□□ -0.53
RPS27A-208ENST00000478196 RIMBP2O15034 1052 aa11.72□□□□□ -0.53
RPS27A-208ENST00000478196 MICALL2Q8IY33 904 aa11.71□□□□□ -0.53
RPS27A-208ENST00000478196 VGFO15240 615 aaPredicted RBP11.7□□□□□ -0.54
RPS27A-208ENST00000478196 ERBB3P21860 1342 aa11.69□□□□□ -0.54
RPS27A-208ENST00000478196 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.68□□□□□ -0.54
RPS27A-208ENST00000478196 RNF25Q96BH1 459 aaPredicted RBP11.68□□□□□ -0.54
RPS27A-208ENST00000478196 ZFP91Q96JP5 570 aaPredicted RBP11.68□□□□□ -0.54
RPS27A-208ENST00000478196 ZSWIM6Q9HCJ5 1215 aa11.65□□□□□ -0.54
RPS27A-208ENST00000478196 TMEM92Q6UXU6 159 aa11.64□□□□□ -0.55
RPS27A-208ENST00000478196 MS4A4AQ96JQ5 239 aa11.64□□□□□ -0.55
RPS27A-208ENST00000478196 PHF8Q9UPP1 1060 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms