RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 NUBP1P53384 320 aa12.76□□□□□ -0.37
SMNDC1-205ENST00000477763 PHF12Q96QT6 1004 aa12.76□□□□□ -0.37
SMNDC1-205ENST00000477763 PAK3O75914 559 aaPredicted RBP12.72□□□□□ -0.37
SMNDC1-205ENST00000477763 DCBLD2Q96PD2 775 aa12.72□□□□□ -0.37
SMNDC1-205ENST00000477763 AMER1Q5JTC6 1135 aaPredicted RBP12.68□□□□□ -0.38
SMNDC1-205ENST00000477763 RASEFQ8IZ41 740 aa12.67□□□□□ -0.38
SMNDC1-205ENST00000477763 FAM212AQ96EL1 285 aa12.66□□□□□ -0.38
SMNDC1-205ENST00000477763 GSE1Q14687 1217 aa12.64□□□□□ -0.39
SMNDC1-205ENST00000477763 TSPYL2Q9H2G4 693 aaPredicted RBP12.62□□□□□ -0.39
SMNDC1-205ENST00000477763 DCAF8Q5TAQ9 597 aa12.6□□□□□ -0.39
SMNDC1-205ENST00000477763 MS4A3Q96HJ5 214 aa12.58□□□□□ -0.4
SMNDC1-205ENST00000477763 CIZ1Q9ULV3 898 aaPredicted RBP12.58□□□□□ -0.4
SMNDC1-205ENST00000477763 CCDC61Q9Y6R9 512 aa12.58□□□□□ -0.4
SMNDC1-205ENST00000477763 TRIM41Q8WV44 630 aa12.57□□□□□ -0.4
SMNDC1-205ENST00000477763 PELP1Q8IZL8 1130 aaKnown RBP12.56□□□□□ -0.4
SMNDC1-205ENST00000477763 RTN4Q9NQC3 1192 aaKnown RBP12.56□□□□□ -0.4
SMNDC1-205ENST00000477763 PKD2Q13563 968 aa12.54□□□□□ -0.4
SMNDC1-205ENST00000477763 POTEB2H3BUK9 544 aa12.5□□□□□ -0.41
SMNDC1-205ENST00000477763 KIF12Q96FN5 646 aa12.5□□□□□ -0.41
SMNDC1-205ENST00000477763 CHRM1P11229 460 aaPredicted RBP12.49□□□□□ -0.41
SMNDC1-205ENST00000477763 ASTLQ6HA08 431 aaPredicted RBP12.48□□□□□ -0.41
SMNDC1-205ENST00000477763 ATMINO43313 823 aaPredicted RBP12.47□□□□□ -0.41
SMNDC1-205ENST00000477763 ECM2O94769 699 aaPredicted RBP12.45□□□□□ -0.42
SMNDC1-205ENST00000477763 MAP3K13O43283 966 aa12.43□□□□□ -0.42
SMNDC1-205ENST00000477763 TRPC6Q9Y210 931 aa12.43□□□□□ -0.42
SMNDC1-205ENST00000477763 PYGBP11216 843 aa12.42□□□□□ -0.42
SMNDC1-205ENST00000477763 OTUD5Q96G74 571 aa12.41□□□□□ -0.42
SMNDC1-205ENST00000477763 SGIP1Q9BQI5 828 aa12.4□□□□□ -0.42
SMNDC1-205ENST00000477763 ATN1P54259 1190 aaPredicted RBP12.39□□□□□ -0.43
SMNDC1-205ENST00000477763 METRNQ9UJH8 293 aa12.38□□□□□ -0.43
SMNDC1-205ENST00000477763 BMP2KQ9NSY1 1161 aaPredicted RBP12.36□□□□□ -0.43
SMNDC1-205ENST00000477763 SLC39A7Q92504 469 aa12.35□□□□□ -0.43
SMNDC1-205ENST00000477763 POTEJP0CG39 1038 aa12.34□□□□□ -0.43
SMNDC1-205ENST00000477763 C7P10643 843 aa12.34□□□□□ -0.43
SMNDC1-205ENST00000477763 ZNF467Q7Z7K2 595 aaPredicted RBP12.33□□□□□ -0.44
SMNDC1-205ENST00000477763 RGL2O15211 777 aa12.32□□□□□ -0.44
SMNDC1-205ENST00000477763 PCDHB13Q9Y5F0 798 aa12.32□□□□□ -0.44
SMNDC1-205ENST00000477763 RNF25Q96BH1 459 aaPredicted RBP12.31□□□□□ -0.44
SMNDC1-205ENST00000477763 RIOK3O14730 519 aaKnown RBP12.3□□□□□ -0.44
SMNDC1-205ENST00000477763 TIE1P35590 1138 aa12.3□□□□□ -0.44
SMNDC1-205ENST00000477763 POTEFA5A3E0 1075 aa12.28□□□□□ -0.44
SMNDC1-205ENST00000477763 TAOK2Q9UL54 1235 aa12.28□□□□□ -0.44
SMNDC1-205ENST00000477763 IFNL1Q8IU54 200 aa12.27□□□□□ -0.45
SMNDC1-205ENST00000477763 TTLL13PA6NNM8 815 aa12.26□□□□□ -0.45
SMNDC1-205ENST00000477763 PCDHB8Q9UN66 801 aa12.25□□□□□ -0.45
SMNDC1-205ENST00000477763 VGFO15240 615 aaPredicted RBP12.24□□□□□ -0.45
SMNDC1-205ENST00000477763 PDAP1Q13442 181 aaKnown RBP12.21□□□□□ -0.45
SMNDC1-205ENST00000477763 COLQQ9Y215 455 aaPredicted RBP12.18□□□□□ -0.46
SMNDC1-205ENST00000477763 TRIM35Q9UPQ4 493 aa12.17□□□□□ -0.46
SMNDC1-205ENST00000477763 PSEN1P49768 467 aa12.16□□□□□ -0.46
SMNDC1-205ENST00000477763 DCAF8L2P0C7V8 631 aa12.15□□□□□ -0.46
SMNDC1-205ENST00000477763 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.13□□□□□ -0.47
SMNDC1-205ENST00000477763 ZFP91Q96JP5 570 aaPredicted RBP12.13□□□□□ -0.47
SMNDC1-205ENST00000477763 MAMSTRQ6ZN01 415 aa12.12□□□□□ -0.47
SMNDC1-205ENST00000477763 HS6ST3Q8IZP7 471 aa12.11□□□□□ -0.47
SMNDC1-205ENST00000477763 TMEM106CQ9BVX2 250 aa12.11□□□□□ -0.47
SMNDC1-205ENST00000477763 STK25O00506 426 aa12.09□□□□□ -0.47
SMNDC1-205ENST00000477763 IER5LQ5T953 404 aa12.09□□□□□ -0.47
SMNDC1-205ENST00000477763 SEC24BO95487 1268 aa12.08□□□□□ -0.48
SMNDC1-205ENST00000477763 CHGAP10645 457 aaKnown RBP12.08□□□□□ -0.48
SMNDC1-205ENST00000477763 BCL11BQ9C0K0 894 aaPredicted RBP12.07□□□□□ -0.48
SMNDC1-205ENST00000477763 DNAJC5Q9H3Z4 198 aa12.06□□□□□ -0.48
SMNDC1-205ENST00000477763 SCUBE2Q9NQ36 999 aa12.06□□□□□ -0.48
SMNDC1-205ENST00000477763 STK24Q9Y6E0 443 aa12.04□□□□□ -0.48
SMNDC1-205ENST00000477763 LCE2DQ5TA82 110 aaPredicted RBP12.02□□□□□ -0.49
SMNDC1-205ENST00000477763 POTEMA6NI47 508 aa12.01□□□□□ -0.49
SMNDC1-205ENST00000477763 IRX5P78411 483 aaPredicted RBP12□□□□□ -0.49
SMNDC1-205ENST00000477763 POTEGQ6S5H5 508 aa12□□□□□ -0.49
SMNDC1-205ENST00000477763 CABP2Q9NPB3 220 aa11.99□□□□□ -0.49
SMNDC1-205ENST00000477763 GOLGA2Q08379 1002 aa11.98□□□□□ -0.49
SMNDC1-205ENST00000477763 BBXQ8WY36 941 aaPredicted RBP11.98□□□□□ -0.49
SMNDC1-205ENST00000477763 PLCG2P16885 1265 aa11.95□□□□□ -0.5
SMNDC1-205ENST00000477763 FAM163AQ96GL9 167 aaPredicted RBP11.95□□□□□ -0.5
SMNDC1-205ENST00000477763 SOX12O15370 315 aa11.93□□□□□ -0.5
SMNDC1-205ENST00000477763 MKRN3Q13064 507 aaKnown RBP11.93□□□□□ -0.5
SMNDC1-205ENST00000477763 EFCAB3Q8N7B9 438 aa11.93□□□□□ -0.5
SMNDC1-205ENST00000477763 OCEL1Q9H607 264 aa11.91□□□□□ -0.5
SMNDC1-205ENST00000477763 NKX1-1Q15270 411 aaPredicted RBP11.9□□□□□ -0.5
SMNDC1-205ENST00000477763 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.9□□□□□ -0.5
SMNDC1-205ENST00000477763 PLSCR2Q9NRY7 297 aa11.89□□□□□ -0.51
SMNDC1-205ENST00000477763 RYDENQ9NUL5 291 aaKnown RBP11.88□□□□□ -0.51
SMNDC1-205ENST00000477763 ILDR1Q86SU0 546 aaPredicted RBP11.87□□□□□ -0.51
SMNDC1-205ENST00000477763 SLAIN1Q8ND83 568 aa11.86□□□□□ -0.51
SMNDC1-205ENST00000477763 NLRP6P59044 892 aa11.85□□□□□ -0.51
SMNDC1-205ENST00000477763 PDCD7Q8N8D1 485 aaKnown RBP11.85□□□□□ -0.51
SMNDC1-205ENST00000477763 MFRPQ9BY79 579 aa11.85□□□□□ -0.51
SMNDC1-205ENST00000477763 FBXO22Q8NEZ5 403 aa11.83□□□□□ -0.52
SMNDC1-205ENST00000477763 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.83□□□□□ -0.523e-9■□□□□ 9.5
SMNDC1-205ENST00000477763 PHF8Q9UPP1 1060 aa11.82□□□□□ -0.52
SMNDC1-205ENST00000477763 GTPBP6O43824 516 aaPredicted RBP11.8□□□□□ -0.52
SMNDC1-205ENST00000477763 SPRYD3Q8NCJ5 442 aa11.79□□□□□ -0.52
SMNDC1-205ENST00000477763 MS4A4AQ96JQ5 239 aa11.77□□□□□ -0.53
SMNDC1-205ENST00000477763 PCDH10Q9P2E7 1040 aa11.77□□□□□ -0.53
SMNDC1-205ENST00000477763 ST18O60284 1047 aa11.75□□□□□ -0.53
SMNDC1-205ENST00000477763 PAXIP1Q6ZW49 1069 aaPredicted RBP11.75□□□□□ -0.53
SMNDC1-205ENST00000477763 PLCB2Q00722 1185 aa11.74□□□□□ -0.53
SMNDC1-205ENST00000477763 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.73□□□□□ -0.53
SMNDC1-205ENST00000477763 CFAP44Q96MT7 982 aa11.72□□□□□ -0.53
SMNDC1-205ENST00000477763 DPY19L2Q6NUT2 758 aa11.71□□□□□ -0.53
SMNDC1-205ENST00000477763 L3MBTL3Q96JM7 780 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms