RNA–Protein interactions for RNA: ENST00000476744.5

CCNL1-218, Transcript of cyclin L1, humanhuman

TSL 2

Gene CCNL1, Length 1,029 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-218ENST00000476744 FAM212AQ96EL1 285 aa14.58□□□□□ -0.08
CCNL1-218ENST00000476744 SPOCK2Q92563 424 aa14.56□□□□□ -0.08
CCNL1-218ENST00000476744 PHF12Q96QT6 1004 aa14.54□□□□□ -0.08
CCNL1-218ENST00000476744 GABBR2O75899 941 aa14.53□□□□□ -0.08
CCNL1-218ENST00000476744 CLCN6P51797 869 aa14.51□□□□□ -0.09
CCNL1-218ENST00000476744 DCAF8Q5TAQ9 597 aa14.51□□□□□ -0.09
CCNL1-218ENST00000476744 CCDC61Q9Y6R9 512 aa14.51□□□□□ -0.09
CCNL1-218ENST00000476744 GSE1Q14687 1217 aa14.45□□□□□ -0.1
CCNL1-218ENST00000476744 CIZ1Q9ULV3 898 aaPredicted RBP14.41□□□□□ -0.1
CCNL1-218ENST00000476744 KIF12Q96FN5 646 aa14.39□□□□□ -0.11
CCNL1-218ENST00000476744 GALR2O43603 387 aaPredicted RBP14.38□□□□□ -0.11
CCNL1-218ENST00000476744 MS4A3Q96HJ5 214 aa14.36□□□□□ -0.11
CCNL1-218ENST00000476744 MAP3K13O43283 966 aa14.35□□□□□ -0.11
CCNL1-218ENST00000476744 PYGBP11216 843 aa14.35□□□□□ -0.11
CCNL1-218ENST00000476744 DCBLD2Q96PD2 775 aa14.31□□□□□ -0.12
CCNL1-218ENST00000476744 PCDHB13Q9Y5F0 798 aa14.31□□□□□ -0.12
CCNL1-218ENST00000476744 SGIP1Q9BQI5 828 aa14.27□□□□□ -0.13
CCNL1-218ENST00000476744 ZCCHC6Q5VYS8 1495 aaKnown RBP14.25□□□□□ -0.13
CCNL1-218ENST00000476744 CHRM1P11229 460 aaPredicted RBP14.22□□□□□ -0.13
CCNL1-218ENST00000476744 TRIM41Q8WV44 630 aa14.22□□□□□ -0.13
CCNL1-218ENST00000476744 IFNL1Q8IU54 200 aa14.21□□□□□ -0.13
CCNL1-218ENST00000476744 POTEIP0CG38 1075 aa14.18□□□□□ -0.14
CCNL1-218ENST00000476744 ZNF467Q7Z7K2 595 aaPredicted RBP14.17□□□□□ -0.14
CCNL1-218ENST00000476744 TRPC6Q9Y210 931 aa14.17□□□□□ -0.14
CCNL1-218ENST00000476744 PCDHB8Q9UN66 801 aa14.16□□□□□ -0.14
CCNL1-218ENST00000476744 TIE1P35590 1138 aa14.13□□□□□ -0.15
CCNL1-218ENST00000476744 BMP2KQ9NSY1 1161 aaPredicted RBP14.12□□□□□ -0.15
CCNL1-218ENST00000476744 ASTLQ6HA08 431 aaPredicted RBP14.11□□□□□ -0.15
CCNL1-218ENST00000476744 ATMINO43313 823 aaPredicted RBP14.1□□□□□ -0.15
CCNL1-218ENST00000476744 ECM2O94769 699 aaPredicted RBP14.08□□□□□ -0.16
CCNL1-218ENST00000476744 TMEM106CQ9BVX2 250 aa14.07□□□□□ -0.16
CCNL1-218ENST00000476744 TTLL13PA6NNM8 815 aa14.06□□□□□ -0.16
CCNL1-218ENST00000476744 ATN1P54259 1190 aaPredicted RBP14.06□□□□□ -0.16
CCNL1-218ENST00000476744 PKD2Q13563 968 aa14.05□□□□□ -0.16
CCNL1-218ENST00000476744 DCAF1Q9Y4B6 1507 aa14.05□□□□□ -0.16
CCNL1-218ENST00000476744 PDAP1Q13442 181 aaKnown RBP14.02□□□□□ -0.17
CCNL1-218ENST00000476744 PELP1Q8IZL8 1130 aaKnown RBP14.02□□□□□ -0.17
CCNL1-218ENST00000476744 PSEN1P49768 467 aa14.01□□□□□ -0.17
CCNL1-218ENST00000476744 RIOK3O14730 519 aaKnown RBP14□□□□□ -0.17
CCNL1-218ENST00000476744 SLC39A7Q92504 469 aa13.99□□□□□ -0.17
CCNL1-218ENST00000476744 TRIM35Q9UPQ4 493 aa13.99□□□□□ -0.17
CCNL1-218ENST00000476744 RNF25Q96BH1 459 aaPredicted RBP13.98□□□□□ -0.17
CCNL1-218ENST00000476744 C7P10643 843 aa13.95□□□□□ -0.18
CCNL1-218ENST00000476744 METRNQ9UJH8 293 aa13.95□□□□□ -0.18
CCNL1-218ENST00000476744 VGFO15240 615 aaPredicted RBP13.92□□□□□ -0.18
CCNL1-218ENST00000476744 GOLGA2Q08379 1002 aa13.92□□□□□ -0.18
CCNL1-218ENST00000476744 TAOK2Q9UL54 1235 aa13.92□□□□□ -0.18
CCNL1-218ENST00000476744 RGL2O15211 777 aa13.9□□□□□ -0.18
CCNL1-218ENST00000476744 IER5LQ5T953 404 aa13.88□□□□□ -0.19
CCNL1-218ENST00000476744 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.86□□□□□ -0.19
CCNL1-218ENST00000476744 SEC24BO95487 1268 aa13.86□□□□□ -0.19
CCNL1-218ENST00000476744 ZFP91Q96JP5 570 aaPredicted RBP13.86□□□□□ -0.19
CCNL1-218ENST00000476744 MKRN3Q13064 507 aaKnown RBP13.85□□□□□ -0.19
CCNL1-218ENST00000476744 CABP2Q9NPB3 220 aa13.85□□□□□ -0.19
CCNL1-218ENST00000476744 LHX8Q68G74 356 aa13.84□□□□□ -0.19
CCNL1-218ENST00000476744 PLCG2P16885 1265 aa13.79□□□□□ -0.2
CCNL1-218ENST00000476744 AMER1Q5JTC6 1135 aaPredicted RBP13.79□□□□□ -0.2
CCNL1-218ENST00000476744 COLQQ9Y215 455 aaPredicted RBP13.78□□□□□ -0.2
CCNL1-218ENST00000476744 STK25O00506 426 aa13.77□□□□□ -0.21
CCNL1-218ENST00000476744 BCL11BQ9C0K0 894 aaPredicted RBP13.77□□□□□ -0.21
CCNL1-218ENST00000476744 MYO15BQ96JP2 1530 aa13.76□□□□□ -0.21
CCNL1-218ENST00000476744 POTEFA5A3E0 1075 aa13.76□□□□□ -0.21
CCNL1-218ENST00000476744 STK24Q9Y6E0 443 aa13.76□□□□□ -0.21
CCNL1-218ENST00000476744 IRX5P78411 483 aaPredicted RBP13.75□□□□□ -0.21
CCNL1-218ENST00000476744 OCEL1Q9H607 264 aa13.74□□□□□ -0.21
CCNL1-218ENST00000476744 POTEB2H3BUK9 544 aa13.73□□□□□ -0.21
CCNL1-218ENST00000476744 EFCAB3Q8N7B9 438 aa13.73□□□□□ -0.21
CCNL1-218ENST00000476744 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.73□□□□□ -0.214e-11■■■□□ 17.4
CCNL1-218ENST00000476744 DCAF8L2P0C7V8 631 aa13.7□□□□□ -0.22
CCNL1-218ENST00000476744 RTN4Q9NQC3 1192 aaKnown RBP13.69□□□□□ -0.22
CCNL1-218ENST00000476744 SOX12O15370 315 aa13.64□□□□□ -0.23
CCNL1-218ENST00000476744 CHGAP10645 457 aaKnown RBP13.64□□□□□ -0.23
CCNL1-218ENST00000476744 PDCD7Q8N8D1 485 aaKnown RBP13.64□□□□□ -0.23
CCNL1-218ENST00000476744 MAMSTRQ6ZN01 415 aa13.63□□□□□ -0.23
CCNL1-218ENST00000476744 POTEJP0CG39 1038 aa13.62□□□□□ -0.23
CCNL1-218ENST00000476744 HS6ST3Q8IZP7 471 aa13.62□□□□□ -0.23
CCNL1-218ENST00000476744 SCUBE2Q9NQ36 999 aa13.61□□□□□ -0.23
CCNL1-218ENST00000476744 SHROOM4Q9ULL8 1493 aa13.61□□□□□ -0.23
CCNL1-218ENST00000476744 ILDR1Q86SU0 546 aaPredicted RBP13.6□□□□□ -0.23
CCNL1-218ENST00000476744 PHF8Q9UPP1 1060 aa13.59□□□□□ -0.23
CCNL1-218ENST00000476744 OTUD5Q96G74 571 aa13.58□□□□□ -0.24
CCNL1-218ENST00000476744 L3MBTL3Q96JM7 780 aaPredicted RBP13.57□□□□□ -0.24
CCNL1-218ENST00000476744 NLRP6P59044 892 aa13.56□□□□□ -0.24
CCNL1-218ENST00000476744 DPY19L2Q6NUT2 758 aa13.56□□□□□ -0.24
CCNL1-218ENST00000476744 G3V3G9 751 aa13.55□□□□□ -0.24
CCNL1-218ENST00000476744 MFRPQ9BY79 579 aa13.52□□□□□ -0.25
CCNL1-218ENST00000476744 MS4A4AQ96JQ5 239 aa13.5□□□□□ -0.25
CCNL1-218ENST00000476744 C3orf67Q6ZVT6 689 aa13.49□□□□□ -0.25
CCNL1-218ENST00000476744 FBXO22Q8NEZ5 403 aa13.49□□□□□ -0.25
CCNL1-218ENST00000476744 BOLA1Q9Y3E2 137 aa13.49□□□□□ -0.25
CCNL1-218ENST00000476744 NACADO15069 1562 aa13.47□□□□□ -0.25
CCNL1-218ENST00000476744 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.47□□□□□ -0.25
CCNL1-218ENST00000476744 ABCC9O60706 1549 aa13.46□□□□□ -0.25
CCNL1-218ENST00000476744 SLAIN1Q8ND83 568 aa13.43□□□□□ -0.26
CCNL1-218ENST00000476744 DNAJC5Q9H3Z4 198 aa13.43□□□□□ -0.26
CCNL1-218ENST00000476744 NKX1-1Q15270 411 aaPredicted RBP13.4□□□□□ -0.26
CCNL1-218ENST00000476744 MICALL2Q8IY33 904 aa13.39□□□□□ -0.27
CCNL1-218ENST00000476744 TMEM121BQ9BXQ6 578 aaPredicted RBP13.38□□□□□ -0.27
CCNL1-218ENST00000476744 RYDENQ9NUL5 291 aaKnown RBP13.38□□□□□ -0.27
CCNL1-218ENST00000476744 SCRIBQ14160 1630 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms