RNA–Protein interactions for RNA: ENST00000475401.1

TM9SF3-204, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 2

Gene TM9SF3, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-204ENST00000475401 DCAF8L2P0C7V8 631 aa14.92□□□□□ -0.02
TM9SF3-204ENST00000475401 CD44P16070 742 aaKnown RBP14.84□□□□□ -0.03
TM9SF3-204ENST00000475401 PYGBP11216 843 aa14.8□□□□□ -0.04
TM9SF3-204ENST00000475401 CHRM1P11229 460 aaPredicted RBP14.8□□□□□ -0.04
TM9SF3-204ENST00000475401 ZRANB1Q9UGI0 708 aa14.8□□□□□ -0.04
TM9SF3-204ENST00000475401 TAOK2Q9UL54 1235 aa14.78□□□□□ -0.04
TM9SF3-204ENST00000475401 RGL2O15211 777 aa14.77□□□□□ -0.05
TM9SF3-204ENST00000475401 HAX1O00165 279 aa14.76□□□□□ -0.05
TM9SF3-204ENST00000475401 CCDC61Q9Y6R9 512 aa14.75□□□□□ -0.05
TM9SF3-204ENST00000475401 C19orf67A6NJJ6 358 aa14.74□□□□□ -0.05
TM9SF3-204ENST00000475401 RIOK3O14730 519 aaKnown RBP14.71□□□□□ -0.05
TM9SF3-204ENST00000475401 POTEHQ6S545 545 aa14.7□□□□□ -0.06
TM9SF3-204ENST00000475401 ZNF467Q7Z7K2 595 aaPredicted RBP14.68□□□□□ -0.06
TM9SF3-204ENST00000475401 RNF25Q96BH1 459 aaPredicted RBP14.65□□□□□ -0.06
TM9SF3-204ENST00000475401 VGFO15240 615 aaPredicted RBP14.63□□□□□ -0.07
TM9SF3-204ENST00000475401 ZNF579Q8NAF0 562 aaKnown RBP14.63□□□□□ -0.07
TM9SF3-204ENST00000475401 SGIP1Q9BQI5 828 aa14.63□□□□□ -0.07
TM9SF3-204ENST00000475401 PCDHB13Q9Y5F0 798 aa14.63□□□□□ -0.07
TM9SF3-204ENST00000475401 KIF12Q96FN5 646 aa14.61□□□□□ -0.07
TM9SF3-204ENST00000475401 PHF12Q96QT6 1004 aa14.61□□□□□ -0.07
TM9SF3-204ENST00000475401 MAP3K13O43283 966 aa14.59□□□□□ -0.07
TM9SF3-204ENST00000475401 CHGAP10645 457 aaKnown RBP14.59□□□□□ -0.07
TM9SF3-204ENST00000475401 PCDHB8Q9UN66 801 aa14.55□□□□□ -0.08
TM9SF3-204ENST00000475401 CLCN6P51797 869 aa14.54□□□□□ -0.08
TM9SF3-204ENST00000475401 PDAP1Q13442 181 aaKnown RBP14.53□□□□□ -0.08
TM9SF3-204ENST00000475401 STK25O00506 426 aa14.52□□□□□ -0.09
TM9SF3-204ENST00000475401 IFNL1Q8IU54 200 aa14.52□□□□□ -0.09
TM9SF3-204ENST00000475401 HS6ST3Q8IZP7 471 aa14.51□□□□□ -0.09
TM9SF3-204ENST00000475401 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.5□□□□□ -0.09
TM9SF3-204ENST00000475401 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.49□□□□□ -0.09
TM9SF3-204ENST00000475401 ZFP91Q96JP5 570 aaPredicted RBP14.49□□□□□ -0.09
TM9SF3-204ENST00000475401 BBXQ8WY36 941 aaPredicted RBP14.48□□□□□ -0.09
TM9SF3-204ENST00000475401 PSEN1P49768 467 aa14.47□□□□□ -0.09
TM9SF3-204ENST00000475401 EVX2Q03828 476 aa14.47□□□□□ -0.09
TM9SF3-204ENST00000475401 STK24Q9Y6E0 443 aa14.46□□□□□ -0.09
TM9SF3-204ENST00000475401 MS4A3Q96HJ5 214 aa14.45□□□□□ -0.1
TM9SF3-204ENST00000475401 BCL11BQ9C0K0 894 aaPredicted RBP14.44□□□□□ -0.1
TM9SF3-204ENST00000475401 GALR2O43603 387 aaPredicted RBP14.35□□□□□ -0.11
TM9SF3-204ENST00000475401 GOLGA2Q08379 1002 aa14.34□□□□□ -0.11
TM9SF3-204ENST00000475401 TMEM106CQ9BVX2 250 aa14.34□□□□□ -0.11
TM9SF3-204ENST00000475401 DNAJC5Q9H3Z4 198 aa14.33□□□□□ -0.12
TM9SF3-204ENST00000475401 TIE1P35590 1138 aa14.32□□□□□ -0.12
TM9SF3-204ENST00000475401 PLCB2Q00722 1185 aa14.32□□□□□ -0.12
TM9SF3-204ENST00000475401 SPRYD3Q8NCJ5 442 aa14.3□□□□□ -0.12
TM9SF3-204ENST00000475401 RYDENQ9NUL5 291 aaKnown RBP14.3□□□□□ -0.12
TM9SF3-204ENST00000475401 GABBR2O75899 941 aa14.29□□□□□ -0.12
TM9SF3-204ENST00000475401 PAXIP1Q6ZW49 1069 aaPredicted RBP14.29□□□□□ -0.12
TM9SF3-204ENST00000475401 CFAP44Q96MT7 982 aa14.29□□□□□ -0.12
TM9SF3-204ENST00000475401 CABP2Q9NPB3 220 aa14.29□□□□□ -0.12
TM9SF3-204ENST00000475401 TRPC6Q9Y210 931 aa14.27□□□□□ -0.13
TM9SF3-204ENST00000475401 SP7Q8TDD2 431 aaPredicted RBP14.25□□□□□ -0.13
TM9SF3-204ENST00000475401 TTLL13PA6NNM8 815 aa14.23□□□□□ -0.13
TM9SF3-204ENST00000475401 SLC24A1O60721 1099 aa14.23□□□□□ -0.13
TM9SF3-204ENST00000475401 DCBLD2Q96PD2 775 aa14.23□□□□□ -0.13
TM9SF3-204ENST00000475401 BMP2KQ9NSY1 1161 aaPredicted RBP14.23□□□□□ -0.13
TM9SF3-204ENST00000475401 MKRN3Q13064 507 aaKnown RBP14.22□□□□□ -0.13
TM9SF3-204ENST00000475401 NKX1-1Q15270 411 aaPredicted RBP14.2□□□□□ -0.14
TM9SF3-204ENST00000475401 EFCAB3Q8N7B9 438 aa14.2□□□□□ -0.14
TM9SF3-204ENST00000475401 SOX12O15370 315 aa14.19□□□□□ -0.14
TM9SF3-204ENST00000475401 HAP1P54257 671 aaPredicted RBP14.16□□□□□ -0.14
TM9SF3-204ENST00000475401 TRIM35Q9UPQ4 493 aa14.16□□□□□ -0.14
TM9SF3-204ENST00000475401 NLRP6P59044 892 aa14.15□□□□□ -0.14
TM9SF3-204ENST00000475401 ATMINO43313 823 aaPredicted RBP14.13□□□□□ -0.15
TM9SF3-204ENST00000475401 GTPBP6O43824 516 aaPredicted RBP14.13□□□□□ -0.15
TM9SF3-204ENST00000475401 ASTLQ6HA08 431 aaPredicted RBP14.13□□□□□ -0.15
TM9SF3-204ENST00000475401 ATN1P54259 1190 aaPredicted RBP14.12□□□□□ -0.15
TM9SF3-204ENST00000475401 MFRPQ9BY79 579 aa14.1□□□□□ -0.15
TM9SF3-204ENST00000475401 PHF8Q9UPP1 1060 aa14.08□□□□□ -0.16
TM9SF3-204ENST00000475401 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.06□□□□□ -0.162e-6■□□□□ 9.2
TM9SF3-204ENST00000475401 IER5LQ5T953 404 aa14.05□□□□□ -0.16
TM9SF3-204ENST00000475401 FBXO22Q8NEZ5 403 aa14.02□□□□□ -0.17
TM9SF3-204ENST00000475401 SEC24BO95487 1268 aa13.99□□□□□ -0.17
TM9SF3-204ENST00000475401 SLC39A7Q92504 469 aa13.99□□□□□ -0.17
TM9SF3-204ENST00000475401 PLCG2P16885 1265 aa13.97□□□□□ -0.17
TM9SF3-204ENST00000475401 OCEL1Q9H607 264 aa13.97□□□□□ -0.17
TM9SF3-204ENST00000475401 C7P10643 843 aa13.96□□□□□ -0.17
TM9SF3-204ENST00000475401 TSHZ2Q9NRE2 1034 aa13.96□□□□□ -0.17
TM9SF3-204ENST00000475401 PELP1Q8IZL8 1130 aaKnown RBP13.93□□□□□ -0.18
TM9SF3-204ENST00000475401 MS4A4AQ96JQ5 239 aa13.93□□□□□ -0.18
TM9SF3-204ENST00000475401 G3V3G9 751 aa13.92□□□□□ -0.18
TM9SF3-204ENST00000475401 IRX5P78411 483 aaPredicted RBP13.92□□□□□ -0.18
TM9SF3-204ENST00000475401 ILDR1Q86SU0 546 aaPredicted RBP13.92□□□□□ -0.18
TM9SF3-204ENST00000475401 VSIG10Q8N0Z9 540 aa13.92□□□□□ -0.18
TM9SF3-204ENST00000475401 POTEIP0CG38 1075 aa13.91□□□□□ -0.18
TM9SF3-204ENST00000475401 METRNQ9UJH8 293 aa13.9□□□□□ -0.18
TM9SF3-204ENST00000475401 PPP1R37O75864 691 aa13.89□□□□□ -0.19
TM9SF3-204ENST00000475401 PDCD7Q8N8D1 485 aaKnown RBP13.87□□□□□ -0.19
TM9SF3-204ENST00000475401 L3MBTL3Q96JM7 780 aaPredicted RBP13.85□□□□□ -0.19
TM9SF3-204ENST00000475401 DPY19L2Q6NUT2 758 aa13.83□□□□□ -0.2
TM9SF3-204ENST00000475401 COLQQ9Y215 455 aaPredicted RBP13.81□□□□□ -0.2
TM9SF3-204ENST00000475401 BOLA1Q9Y3E2 137 aa13.8□□□□□ -0.2
TM9SF3-204ENST00000475401 MICALL2Q8IY33 904 aa13.76□□□□□ -0.21
TM9SF3-204ENST00000475401 WDR70Q9NW82 654 aa13.76□□□□□ -0.21
TM9SF3-204ENST00000475401 KDM2AQ9Y2K7 1162 aa13.74□□□□□ -0.21
TM9SF3-204ENST00000475401 CADPS2Q86UW7 1296 aa13.73□□□□□ -0.21
TM9SF3-204ENST00000475401 POTEFA5A3E0 1075 aa13.71□□□□□ -0.21
TM9SF3-204ENST00000475401 PDE4AP27815 886 aa13.71□□□□□ -0.21
TM9SF3-204ENST00000475401 C3orf67Q6ZVT6 689 aa13.7□□□□□ -0.22
TM9SF3-204ENST00000475401 TMEM121BQ9BXQ6 578 aaPredicted RBP13.69□□□□□ -0.22
TM9SF3-204ENST00000475401 TMC2Q8TDI7 906 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms