RNA–Protein interactions for RNA: ENST00000474281.1

PGK1-202, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 1 (best)

Gene PGK1, Length 307 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-202ENST00000474281 NKX1-1Q15270 411 aaPredicted RBP8.57□□□□□ -1.04
PGK1-202ENST00000474281 TIMELESSQ9UNS1 1208 aa8.56□□□□□ -1.04
PGK1-202ENST00000474281 GTF3C3Q9Y5Q9 886 aa8.54□□□□□ -1.04
PGK1-202ENST00000474281 TULP1O00294 542 aaPredicted RBP8.52□□□□□ -1.05
PGK1-202ENST00000474281 RIOK3O14730 519 aaKnown RBP8.52□□□□□ -1.05
PGK1-202ENST00000474281 NUBP1P53384 320 aa8.52□□□□□ -1.05
PGK1-202ENST00000474281 DCAF8Q5TAQ9 597 aa8.48□□□□□ -1.05
PGK1-202ENST00000474281 ERICH6Q7L0X2 663 aa8.48□□□□□ -1.05
PGK1-202ENST00000474281 VGFO15240 615 aaPredicted RBP8.47□□□□□ -1.05
PGK1-202ENST00000474281 STK25O00506 426 aa8.46□□□□□ -1.06
PGK1-202ENST00000474281 SGIP1Q9BQI5 828 aa8.45□□□□□ -1.06
PGK1-202ENST00000474281 CHRM1P11229 460 aaPredicted RBP8.44□□□□□ -1.06
PGK1-202ENST00000474281 TMEM132AQ24JP5 1023 aa8.44□□□□□ -1.06
PGK1-202ENST00000474281 RYDENQ9NUL5 291 aaKnown RBP8.43□□□□□ -1.06
PGK1-202ENST00000474281 FAM212AQ96EL1 285 aa8.4□□□□□ -1.06
PGK1-202ENST00000474281 ARXQ96QS3 562 aa8.39□□□□□ -1.07
PGK1-202ENST00000474281 P3H3Q8IVL6 736 aa8.38□□□□□ -1.07
PGK1-202ENST00000474281 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.37□□□□□ -1.07
PGK1-202ENST00000474281 ZFP91Q96JP5 570 aaPredicted RBP8.37□□□□□ -1.07
PGK1-202ENST00000474281 BCL11BQ9C0K0 894 aaPredicted RBP8.37□□□□□ -1.07
PGK1-202ENST00000474281 STK24Q9Y6E0 443 aa8.37□□□□□ -1.07
PGK1-202ENST00000474281 MNX1P50219 401 aaPredicted RBP8.36□□□□□ -1.07
PGK1-202ENST00000474281 CREBZFQ9NS37 354 aa8.35□□□□□ -1.07
PGK1-202ENST00000474281 SPDYE1Q8NFV5 336 aaPredicted RBP8.33□□□□□ -1.08
PGK1-202ENST00000474281 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.32□□□□□ -1.08
PGK1-202ENST00000474281 RASEFQ8IZ41 740 aa8.31□□□□□ -1.08
PGK1-202ENST00000474281 PRR29P0C7W0 189 aa8.29□□□□□ -1.08
PGK1-202ENST00000474281 LMOD2Q6P5Q4 547 aa8.29□□□□□ -1.08
PGK1-202ENST00000474281 WDR70Q9NW82 654 aa8.29□□□□□ -1.08
PGK1-202ENST00000474281 PYGBP11216 843 aa8.28□□□□□ -1.08
PGK1-202ENST00000474281 KCNV2Q8TDN2 545 aa8.27□□□□□ -1.09
PGK1-202ENST00000474281 C14orf37Q86TY3 774 aa8.26□□□□□ -1.09
PGK1-202ENST00000474281 CADPS2Q86UW7 1296 aa8.26□□□□□ -1.09
PGK1-202ENST00000474281 AKT1S1Q96B36 256 aa8.25□□□□□ -1.09
PGK1-202ENST00000474281 DAXXQ9UER7 740 aaPredicted RBP8.24□□□□□ -1.09
PGK1-202ENST00000474281 CLEC11AQ9Y240 323 aa8.24□□□□□ -1.09
PGK1-202ENST00000474281 BRPF1P55201 1214 aaPredicted RBP8.21□□□□□ -1.1
PGK1-202ENST00000474281 HOMEZQ8IX15 550 aa8.2□□□□□ -1.1
PGK1-202ENST00000474281 RBM42Q9BTD8 480 aaKnown RBP8.19□□□□□ -1.1
PGK1-202ENST00000474281 ZNF467Q7Z7K2 595 aaPredicted RBP8.18□□□□□ -1.1
PGK1-202ENST00000474281 POTEDQ86YR6 584 aa8.18□□□□□ -1.1
PGK1-202ENST00000474281 ARHGEF1Q92888 912 aaKnown RBP8.18□□□□□ -1.1
PGK1-202ENST00000474281 REM2Q8IYK8 340 aaPredicted RBP8.17□□□□□ -1.1
PGK1-202ENST00000474281 ZC3H15Q8WU90 426 aaKnown RBP8.17□□□□□ -1.1
PGK1-202ENST00000474281 PDAP1Q13442 181 aaKnown RBP8.15□□□□□ -1.1
PGK1-202ENST00000474281 MFRPQ9BY79 579 aa8.14□□□□□ -1.11
PGK1-202ENST00000474281 TESPA1A2RU30 521 aaPredicted RBP8.12□□□□□ -1.11
PGK1-202ENST00000474281 E2F4Q16254 413 aa8.12□□□□□ -1.11
PGK1-202ENST00000474281 NEUROD2Q15784 382 aa8.11□□□□□ -1.11
PGK1-202ENST00000474281 CACNB1Q02641 598 aaPredicted RBP8.1□□□□□ -1.11
PGK1-202ENST00000474281 SEMA3EO15041 775 aa8.09□□□□□ -1.11
PGK1-202ENST00000474281 SLC24A3Q9HC58 644 aa8.09□□□□□ -1.11
PGK1-202ENST00000474281 PCDHB8Q9UN66 801 aa8.09□□□□□ -1.11
PGK1-202ENST00000474281 PCDHB13Q9Y5F0 798 aa8.09□□□□□ -1.11
PGK1-202ENST00000474281 TSPYL2Q9H2G4 693 aaPredicted RBP8.08□□□□□ -1.12
PGK1-202ENST00000474281 PPP1R37O75864 691 aa8.07□□□□□ -1.12
PGK1-202ENST00000474281 PSEN1P49768 467 aa8.07□□□□□ -1.12
PGK1-202ENST00000474281 ZNF579Q8NAF0 562 aaKnown RBP8.07□□□□□ -1.12
PGK1-202ENST00000474281 ZMYND10O75800 440 aa8.06□□□□□ -1.12
PGK1-202ENST00000474281 PITPNM1O00562 1244 aa8.05□□□□□ -1.12
PGK1-202ENST00000474281 FBXO22Q8NEZ5 403 aa8.05□□□□□ -1.12
PGK1-202ENST00000474281 NLRP6P59044 892 aa8.04□□□□□ -1.12
PGK1-202ENST00000474281 SOX12O15370 315 aa8.03□□□□□ -1.12
PGK1-202ENST00000474281 SMYD5Q6GMV2 418 aa8.03□□□□□ -1.12
PGK1-202ENST00000474281 CCDC61Q9Y6R9 512 aa8.03□□□□□ -1.12
PGK1-202ENST00000474281 SUPT5HO00267 1087 aaKnown RBP8.01□□□□□ -1.13
PGK1-202ENST00000474281 EFCAB3Q8N7B9 438 aa8.01□□□□□ -1.13
PGK1-202ENST00000474281 ARIH1Q9Y4X5 557 aaPredicted RBP8.01□□□□□ -1.13
PGK1-202ENST00000474281 BARGINQ6ZT62 677 aa8□□□□□ -1.13
PGK1-202ENST00000474281 CHADLQ6NUI6 762 aa7.99□□□□□ -1.13
PGK1-202ENST00000474281 FARP1Q9Y4F1 1045 aaPredicted RBP7.99□□□□□ -1.13
PGK1-202ENST00000474281 NCKAP5LQ9HCH0 1330 aa7.99□□□□□ -1.13
PGK1-202ENST00000474281 PDE4AP27815 886 aa7.98□□□□□ -1.13
PGK1-202ENST00000474281 MFSD10Q14728 455 aa7.98□□□□□ -1.13
PGK1-202ENST00000474281 PHF8Q9UPP1 1060 aa7.98□□□□□ -1.13
PGK1-202ENST00000474281 LARP6Q9BRS8 491 aaKnown RBP7.97□□□□□ -1.13
PGK1-202ENST00000474281 IFNL1Q8IU54 200 aa7.96□□□□□ -1.14
PGK1-202ENST00000474281 CABP2Q9NPB3 220 aa7.96□□□□□ -1.14
PGK1-202ENST00000474281 AK7Q96M32 723 aa7.95□□□□□ -1.14
PGK1-202ENST00000474281 CRISPLD2Q9H0B8 497 aa7.94□□□□□ -1.14
PGK1-202ENST00000474281 CAMK2BQ13554 666 aa7.93□□□□□ -1.14
PGK1-202ENST00000474281 DDX27Q96GQ7 796 aaKnown RBP7.92□□□□□ -1.14
PGK1-202ENST00000474281 MAP3K13O43283 966 aa7.91□□□□□ -1.14
PGK1-202ENST00000474281 KIF12Q96FN5 646 aa7.9□□□□□ -1.14
PGK1-202ENST00000474281 MS4A4AQ96JQ5 239 aa7.9□□□□□ -1.14
PGK1-202ENST00000474281 ZMYND15Q9H091 742 aa7.89□□□□□ -1.15
PGK1-202ENST00000474281 GPBP1L1Q9HC44 474 aaPredicted RBP7.89□□□□□ -1.15
PGK1-202ENST00000474281 GPIHBP1Q8IV16 184 aa7.88□□□□□ -1.15
PGK1-202ENST00000474281 KRI1Q8N9T8 703 aaKnown RBP7.88□□□□□ -1.15
PGK1-202ENST00000474281 PAK3O75914 559 aaPredicted RBP7.87□□□□□ -1.15
PGK1-202ENST00000474281 RBM26Q5T8P6 1007 aaKnown RBP7.87□□□□□ -1.15
PGK1-202ENST00000474281 IL27Q8NEV9 243 aa7.86□□□□□ -1.15
PGK1-202ENST00000474281 PRKAR2AP13861 404 aaKnown RBP7.85□□□□□ -1.15
PGK1-202ENST00000474281 MLLT3P42568 568 aaPredicted RBP7.85□□□□□ -1.15
PGK1-202ENST00000474281 KDM4CQ9H3R0 1056 aa7.85□□□□□ -1.15
PGK1-202ENST00000474281 TRIM66O15016 1216 aa7.84□□□□□ -1.15
PGK1-202ENST00000474281 PDE4DQ08499 809 aa7.83□□□□□ -1.16
PGK1-202ENST00000474281 RSPH6AQ9H0K4 717 aa7.83□□□□□ -1.16
PGK1-202ENST00000474281 UBTFP17480 764 aaKnown RBP7.82□□□□□ -1.16
PGK1-202ENST00000474281 FXR2P51116 673 aaKnown RBP eCLIP7.8□□□□□ -1.161e-14■■□□□ 13.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms