RNA–Protein interactions for RNA: ENST00000472033.1

ABCA4-205, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 3

Gene ABCA4, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-205ENST00000472033 ZNF579Q8NAF0 562 aaKnown RBP14.46□□□□□ -0.09
ABCA4-205ENST00000472033 DCAF8Q5TAQ9 597 aa14.45□□□□□ -0.1
ABCA4-205ENST00000472033 CCDC61Q9Y6R9 512 aa14.43□□□□□ -0.1
ABCA4-205ENST00000472033 PHF12Q96QT6 1004 aa14.42□□□□□ -0.1
ABCA4-205ENST00000472033 GSE1Q14687 1217 aa14.39□□□□□ -0.11
ABCA4-205ENST00000472033 CIZ1Q9ULV3 898 aaPredicted RBP14.38□□□□□ -0.11
ABCA4-205ENST00000472033 GABBR2O75899 941 aa14.34□□□□□ -0.11
ABCA4-205ENST00000472033 CLCN6P51797 869 aa14.32□□□□□ -0.12
ABCA4-205ENST00000472033 PYGBP11216 843 aa14.29□□□□□ -0.12
ABCA4-205ENST00000472033 KIF12Q96FN5 646 aa14.29□□□□□ -0.12
ABCA4-205ENST00000472033 MAP3K13O43283 966 aa14.25□□□□□ -0.13
ABCA4-205ENST00000472033 GALR2O43603 387 aaPredicted RBP14.24□□□□□ -0.13
ABCA4-205ENST00000472033 MS4A3Q96HJ5 214 aa14.24□□□□□ -0.13
ABCA4-205ENST00000472033 PCDHB13Q9Y5F0 798 aa14.21□□□□□ -0.13
ABCA4-205ENST00000472033 TRIM41Q8WV44 630 aa14.2□□□□□ -0.14
ABCA4-205ENST00000472033 CHRM1P11229 460 aaPredicted RBP14.19□□□□□ -0.14
ABCA4-205ENST00000472033 SGIP1Q9BQI5 828 aa14.18□□□□□ -0.14
ABCA4-205ENST00000472033 IFNL1Q8IU54 200 aa14.14□□□□□ -0.15
ABCA4-205ENST00000472033 PKD2Q13563 968 aa14.13□□□□□ -0.15
ABCA4-205ENST00000472033 ECM2O94769 699 aaPredicted RBP14.11□□□□□ -0.15
ABCA4-205ENST00000472033 DCBLD2Q96PD2 775 aa14.11□□□□□ -0.15
ABCA4-205ENST00000472033 PCDHB8Q9UN66 801 aa14.11□□□□□ -0.15
ABCA4-205ENST00000472033 ZNF467Q7Z7K2 595 aaPredicted RBP14.09□□□□□ -0.15
ABCA4-205ENST00000472033 TRPC6Q9Y210 931 aa14.08□□□□□ -0.16
ABCA4-205ENST00000472033 POTEIP0CG38 1075 aa14.01□□□□□ -0.17
ABCA4-205ENST00000472033 TIE1P35590 1138 aa14.01□□□□□ -0.17
ABCA4-205ENST00000472033 RNF25Q96BH1 459 aaPredicted RBP14.01□□□□□ -0.17
ABCA4-205ENST00000472033 RIOK3O14730 519 aaKnown RBP14□□□□□ -0.17
ABCA4-205ENST00000472033 BMP2KQ9NSY1 1161 aaPredicted RBP14□□□□□ -0.17
ABCA4-205ENST00000472033 AMER1Q5JTC6 1135 aaPredicted RBP13.98□□□□□ -0.17
ABCA4-205ENST00000472033 ASTLQ6HA08 431 aaPredicted RBP13.98□□□□□ -0.17
ABCA4-205ENST00000472033 ATMINO43313 823 aaPredicted RBP13.97□□□□□ -0.17
ABCA4-205ENST00000472033 TMEM106CQ9BVX2 250 aa13.97□□□□□ -0.17
ABCA4-205ENST00000472033 TTLL13PA6NNM8 815 aa13.96□□□□□ -0.17
ABCA4-205ENST00000472033 RGL2O15211 777 aa13.96□□□□□ -0.17
ABCA4-205ENST00000472033 PDAP1Q13442 181 aaKnown RBP13.96□□□□□ -0.17
ABCA4-205ENST00000472033 PSEN1P49768 467 aa13.95□□□□□ -0.18
ABCA4-205ENST00000472033 ATN1P54259 1190 aaPredicted RBP13.94□□□□□ -0.18
ABCA4-205ENST00000472033 RTN4Q9NQC3 1192 aaKnown RBP13.92□□□□□ -0.18
ABCA4-205ENST00000472033 VGFO15240 615 aaPredicted RBP13.9□□□□□ -0.18
ABCA4-205ENST00000472033 PELP1Q8IZL8 1130 aaKnown RBP13.9□□□□□ -0.18
ABCA4-205ENST00000472033 TAOK2Q9UL54 1235 aa13.88□□□□□ -0.19
ABCA4-205ENST00000472033 TRIM35Q9UPQ4 493 aa13.87□□□□□ -0.19
ABCA4-205ENST00000472033 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.85□□□□□ -0.19
ABCA4-205ENST00000472033 ZFP91Q96JP5 570 aaPredicted RBP13.85□□□□□ -0.19
ABCA4-205ENST00000472033 SLC39A7Q92504 469 aa13.82□□□□□ -0.2
ABCA4-205ENST00000472033 GOLGA2Q08379 1002 aa13.81□□□□□ -0.2
ABCA4-205ENST00000472033 CABP2Q9NPB3 220 aa13.79□□□□□ -0.2
ABCA4-205ENST00000472033 METRNQ9UJH8 293 aa13.79□□□□□ -0.2
ABCA4-205ENST00000472033 C7P10643 843 aa13.78□□□□□ -0.2
ABCA4-205ENST00000472033 STK25O00506 426 aa13.77□□□□□ -0.21
ABCA4-205ENST00000472033 DCAF8L2P0C7V8 631 aa13.76□□□□□ -0.21
ABCA4-205ENST00000472033 IER5LQ5T953 404 aa13.76□□□□□ -0.21
ABCA4-205ENST00000472033 BCL11BQ9C0K0 894 aaPredicted RBP13.76□□□□□ -0.21
ABCA4-205ENST00000472033 MKRN3Q13064 507 aaKnown RBP13.74□□□□□ -0.21
ABCA4-205ENST00000472033 STK24Q9Y6E0 443 aa13.74□□□□□ -0.21
ABCA4-205ENST00000472033 SEC24BO95487 1268 aa13.7□□□□□ -0.22
ABCA4-205ENST00000472033 CHGAP10645 457 aaKnown RBP13.68□□□□□ -0.22
ABCA4-205ENST00000472033 EFCAB3Q8N7B9 438 aa13.68□□□□□ -0.22
ABCA4-205ENST00000472033 HS6ST3Q8IZP7 471 aa13.67□□□□□ -0.22
ABCA4-205ENST00000472033 COLQQ9Y215 455 aaPredicted RBP13.67□□□□□ -0.22
ABCA4-205ENST00000472033 IRX5P78411 483 aaPredicted RBP13.66□□□□□ -0.22
ABCA4-205ENST00000472033 POTEFA5A3E0 1075 aa13.65□□□□□ -0.22
ABCA4-205ENST00000472033 PLCG2P16885 1265 aa13.65□□□□□ -0.22
ABCA4-205ENST00000472033 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.64□□□□□ -0.23
ABCA4-205ENST00000472033 OCEL1Q9H607 264 aa13.63□□□□□ -0.23
ABCA4-205ENST00000472033 LHX8Q68G74 356 aa13.6□□□□□ -0.23
ABCA4-205ENST00000472033 SOX12O15370 315 aa13.59□□□□□ -0.23
ABCA4-205ENST00000472033 CCDC180Q9P1Z9 1646 aa13.59□□□□□ -0.23
ABCA4-205ENST00000472033 PDCD7Q8N8D1 485 aaKnown RBP13.58□□□□□ -0.24
ABCA4-205ENST00000472033 POTEB2H3BUK9 544 aa13.57□□□□□ -0.24
ABCA4-205ENST00000472033 ILDR1Q86SU0 546 aaPredicted RBP13.56□□□□□ -0.24
ABCA4-205ENST00000472033 PHF8Q9UPP1 1060 aa13.56□□□□□ -0.24
ABCA4-205ENST00000472033 NLRP6P59044 892 aa13.52□□□□□ -0.25
ABCA4-205ENST00000472033 MFRPQ9BY79 579 aa13.52□□□□□ -0.25
ABCA4-205ENST00000472033 DPY19L2Q6NUT2 758 aa13.5□□□□□ -0.25
ABCA4-205ENST00000472033 DNAJC5Q9H3Z4 198 aa13.5□□□□□ -0.25
ABCA4-205ENST00000472033 POTEJP0CG39 1038 aa13.49□□□□□ -0.25
ABCA4-205ENST00000472033 FBXO22Q8NEZ5 403 aa13.48□□□□□ -0.25
ABCA4-205ENST00000472033 MS4A4AQ96JQ5 239 aa13.48□□□□□ -0.25
ABCA4-205ENST00000472033 NKX1-1Q15270 411 aaPredicted RBP13.46□□□□□ -0.25
ABCA4-205ENST00000472033 L3MBTL3Q96JM7 780 aaPredicted RBP13.45□□□□□ -0.26
ABCA4-205ENST00000472033 ABCC9O60706 1549 aa13.44□□□□□ -0.26
ABCA4-205ENST00000472033 MAMSTRQ6ZN01 415 aa13.44□□□□□ -0.26
ABCA4-205ENST00000472033 G3V3G9 751 aa13.42□□□□□ -0.26
ABCA4-205ENST00000472033 SCUBE2Q9NQ36 999 aa13.41□□□□□ -0.26
ABCA4-205ENST00000472033 BOLA1Q9Y3E2 137 aa13.4□□□□□ -0.26
ABCA4-205ENST00000472033 BBXQ8WY36 941 aaPredicted RBP13.39□□□□□ -0.27
ABCA4-205ENST00000472033 OTUD5Q96G74 571 aa13.39□□□□□ -0.27
ABCA4-205ENST00000472033 RYDENQ9NUL5 291 aaKnown RBP13.37□□□□□ -0.27
ABCA4-205ENST00000472033 C3orf67Q6ZVT6 689 aa13.36□□□□□ -0.27
ABCA4-205ENST00000472033 MICALL2Q8IY33 904 aa13.34□□□□□ -0.27
ABCA4-205ENST00000472033 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.33□□□□□ -0.28
ABCA4-205ENST00000472033 GTPBP6O43824 516 aaPredicted RBP13.32□□□□□ -0.28
ABCA4-205ENST00000472033 PPP1R37O75864 691 aa13.32□□□□□ -0.28
ABCA4-205ENST00000472033 TMEM121BQ9BXQ6 578 aaPredicted RBP13.32□□□□□ -0.28
ABCA4-205ENST00000472033 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.31□□□□□ -0.28
ABCA4-205ENST00000472033 SLAIN1Q8ND83 568 aa13.27□□□□□ -0.29
ABCA4-205ENST00000472033 SPRYD3Q8NCJ5 442 aa13.22□□□□□ -0.29
ABCA4-205ENST00000472033 PAXIP1Q6ZW49 1069 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms