RNA–Protein interactions for RNA: ENST00000471868.1

SUPT20H-209, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 3

Gene SUPT20H, Length 798 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-209ENST00000471868 NPM1P06748 294 aaKnown RBP eCLIP10.02□□□□□ -0.81
SUPT20H-209ENST00000471868 ASTLQ6HA08 431 aaPredicted RBP10.01□□□□□ -0.81
SUPT20H-209ENST00000471868 C7P10643 843 aa10□□□□□ -0.81
SUPT20H-209ENST00000471868 MAMSTRQ6ZN01 415 aa10□□□□□ -0.81
SUPT20H-209ENST00000471868 SLC39A7Q92504 469 aa9.99□□□□□ -0.81
SUPT20H-209ENST00000471868 METRNQ9UJH8 293 aa9.98□□□□□ -0.81
SUPT20H-209ENST00000471868 MNX1P50219 401 aaPredicted RBP9.97□□□□□ -0.81
SUPT20H-209ENST00000471868 FBXO3Q9UK99 471 aa9.96□□□□□ -0.82
SUPT20H-209ENST00000471868 ATMINO43313 823 aaPredicted RBP9.94□□□□□ -0.82
SUPT20H-209ENST00000471868 PLEKHG5O94827 1062 aa9.94□□□□□ -0.82
SUPT20H-209ENST00000471868 POTEJP0CG39 1038 aa9.93□□□□□ -0.82
SUPT20H-209ENST00000471868 CCDC180Q9P1Z9 1646 aa9.92□□□□□ -0.82
SUPT20H-209ENST00000471868 MS4A3Q96HJ5 214 aa9.91□□□□□ -0.82
SUPT20H-209ENST00000471868 MIER1Q8N108 512 aa9.89□□□□□ -0.83
SUPT20H-209ENST00000471868 LCE2DQ5TA82 110 aaPredicted RBP9.88□□□□□ -0.83
SUPT20H-209ENST00000471868 SCUBE2Q9NQ36 999 aa9.88□□□□□ -0.83
SUPT20H-209ENST00000471868 PLCD3Q8N3E9 789 aa9.87□□□□□ -0.83
SUPT20H-209ENST00000471868 FAM163AQ96GL9 167 aaPredicted RBP9.84□□□□□ -0.83
SUPT20H-209ENST00000471868 ZBTB47Q9UFB7 747 aaPredicted RBP9.83□□□□□ -0.84
SUPT20H-209ENST00000471868 VASPP50552 380 aaPredicted RBP9.8□□□□□ -0.84
SUPT20H-209ENST00000471868 ATN1P54259 1190 aaPredicted RBP9.8□□□□□ -0.84
SUPT20H-209ENST00000471868 CCDC61Q9Y6R9 512 aa9.78□□□□□ -0.84
SUPT20H-209ENST00000471868 KIF12Q96FN5 646 aa9.75□□□□□ -0.85
SUPT20H-209ENST00000471868 POTEFA5A3E0 1075 aa9.74□□□□□ -0.85
SUPT20H-209ENST00000471868 TSPYL2Q9H2G4 693 aaPredicted RBP9.74□□□□□ -0.85
SUPT20H-209ENST00000471868 TIE1P35590 1138 aa9.72□□□□□ -0.85
SUPT20H-209ENST00000471868 BMP2KQ9NSY1 1161 aaPredicted RBP9.72□□□□□ -0.85
SUPT20H-209ENST00000471868 CDAN1Q8IWY9 1227 aa9.68□□□□□ -0.86
SUPT20H-209ENST00000471868 RASEFQ8IZ41 740 aa9.67□□□□□ -0.86
SUPT20H-209ENST00000471868 KLHL34Q8N239 644 aa9.67□□□□□ -0.86
SUPT20H-209ENST00000471868 NUBP1P53384 320 aa9.66□□□□□ -0.86
SUPT20H-209ENST00000471868 MAP3K13O43283 966 aa9.64□□□□□ -0.87
SUPT20H-209ENST00000471868 SEC24BO95487 1268 aa9.64□□□□□ -0.87
SUPT20H-209ENST00000471868 FAM212AQ96EL1 285 aa9.64□□□□□ -0.87
SUPT20H-209ENST00000471868 TRPC6Q9Y210 931 aa9.64□□□□□ -0.87
SUPT20H-209ENST00000471868 IER5LQ5T953 404 aa9.63□□□□□ -0.87
SUPT20H-209ENST00000471868 COLQQ9Y215 455 aaPredicted RBP9.63□□□□□ -0.87
SUPT20H-209ENST00000471868 TTLL13PA6NNM8 815 aa9.61□□□□□ -0.87
SUPT20H-209ENST00000471868 IFNLR1Q8IU57 520 aaPredicted RBP9.61□□□□□ -0.87
SUPT20H-209ENST00000471868 SGIP1Q9BQI5 828 aa9.59□□□□□ -0.87
SUPT20H-209ENST00000471868 ZCCHC6Q5VYS8 1495 aaKnown RBP9.58□□□□□ -0.88
SUPT20H-209ENST00000471868 SPOCK2Q92563 424 aa9.57□□□□□ -0.88
SUPT20H-209ENST00000471868 DCAF1Q9Y4B6 1507 aa9.56□□□□□ -0.88
SUPT20H-209ENST00000471868 ST18O60284 1047 aa9.55□□□□□ -0.88
SUPT20H-209ENST00000471868 GSE1Q14687 1217 aa9.54□□□□□ -0.88
SUPT20H-209ENST00000471868 DCAF8Q5TAQ9 597 aa9.54□□□□□ -0.88
SUPT20H-209ENST00000471868 TRIM35Q9UPQ4 493 aa9.54□□□□□ -0.88
SUPT20H-209ENST00000471868 SLAIN1Q8ND83 568 aa9.53□□□□□ -0.88
SUPT20H-209ENST00000471868 MMRN1Q13201 1228 aa9.49□□□□□ -0.89
SUPT20H-209ENST00000471868 TMEM121BQ9BXQ6 578 aaPredicted RBP9.49□□□□□ -0.89
SUPT20H-209ENST00000471868 PCDHB13Q9Y5F0 798 aa9.49□□□□□ -0.89
SUPT20H-209ENST00000471868 PYGBP11216 843 aa9.46□□□□□ -0.9
SUPT20H-209ENST00000471868 SPNS2Q8IVW8 549 aa9.46□□□□□ -0.9
SUPT20H-209ENST00000471868 MYO15BQ96JP2 1530 aa9.45□□□□□ -0.9
SUPT20H-209ENST00000471868 PLCG2P16885 1265 aa9.44□□□□□ -0.9
SUPT20H-209ENST00000471868 CIZ1Q9ULV3 898 aaPredicted RBP9.44□□□□□ -0.9
SUPT20H-209ENST00000471868 SNPHO15079 494 aa9.43□□□□□ -0.9
SUPT20H-209ENST00000471868 IRX5P78411 483 aaPredicted RBP9.41□□□□□ -0.9
SUPT20H-209ENST00000471868 IFNL1Q8IU54 200 aa9.41□□□□□ -0.9
SUPT20H-209ENST00000471868 TMEM106CQ9BVX2 250 aa9.41□□□□□ -0.9
SUPT20H-209ENST00000471868 CHRM1P11229 460 aaPredicted RBP9.4□□□□□ -0.9
SUPT20H-209ENST00000471868 TRIM41Q8WV44 630 aa9.4□□□□□ -0.9
SUPT20H-209ENST00000471868 OCEL1Q9H607 264 aa9.38□□□□□ -0.91
SUPT20H-209ENST00000471868 ZNF467Q7Z7K2 595 aaPredicted RBP9.37□□□□□ -0.91
SUPT20H-209ENST00000471868 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.34□□□□□ -0.91
SUPT20H-209ENST00000471868 PCDHB8Q9UN66 801 aa9.33□□□□□ -0.92
SUPT20H-209ENST00000471868 MARVELD3Q96A59 401 aa9.3□□□□□ -0.92
SUPT20H-209ENST00000471868 PDAP1Q13442 181 aaKnown RBP9.25□□□□□ -0.93
SUPT20H-209ENST00000471868 NACADO15069 1562 aa9.24□□□□□ -0.93
SUPT20H-209ENST00000471868 PSEN1P49768 467 aa9.24□□□□□ -0.93
SUPT20H-209ENST00000471868 EMP3P54852 163 aa9.23□□□□□ -0.93
SUPT20H-209ENST00000471868 ECM2O94769 699 aaPredicted RBP9.22□□□□□ -0.93
SUPT20H-209ENST00000471868 RIOK3O14730 519 aaKnown RBP9.21□□□□□ -0.94
SUPT20H-209ENST00000471868 DCAF8L2P0C7V8 631 aa9.21□□□□□ -0.94
SUPT20H-209ENST00000471868 GOLGA2Q08379 1002 aa9.2□□□□□ -0.94
SUPT20H-209ENST00000471868 PKD2Q13563 968 aa9.2□□□□□ -0.94
SUPT20H-209ENST00000471868 C3orf67Q6ZVT6 689 aa9.2□□□□□ -0.94
SUPT20H-209ENST00000471868 RNF25Q96BH1 459 aaPredicted RBP9.2□□□□□ -0.94
SUPT20H-209ENST00000471868 L3MBTL3Q96JM7 780 aaPredicted RBP9.2□□□□□ -0.94
SUPT20H-209ENST00000471868 KRTAP3-3Q9BYR6 98 aa9.2□□□□□ -0.94
SUPT20H-209ENST00000471868 KRTAP3-2Q9BYR7 98 aa9.2□□□□□ -0.94
SUPT20H-209ENST00000471868 PDCD7Q8N8D1 485 aaKnown RBP9.18□□□□□ -0.94
SUPT20H-209ENST00000471868 HS3ST6Q96QI5 342 aa9.18□□□□□ -0.94
SUPT20H-209ENST00000471868 TAOK2Q9UL54 1235 aa9.18□□□□□ -0.94
SUPT20H-209ENST00000471868 VGFO15240 615 aaPredicted RBP9.17□□□□□ -0.94
SUPT20H-209ENST00000471868 POTEB3A0JP26 581 aa9.16□□□□□ -0.94
SUPT20H-209ENST00000471868 MKRN3Q13064 507 aaKnown RBP9.16□□□□□ -0.94
SUPT20H-209ENST00000471868 POTEBQ6S5H4 581 aa9.16□□□□□ -0.94
SUPT20H-209ENST00000471868 FAM205CA6NFA0 338 aa9.14□□□□□ -0.95
SUPT20H-209ENST00000471868 CABP2Q9NPB3 220 aa9.13□□□□□ -0.95
SUPT20H-209ENST00000471868 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.12□□□□□ -0.95
SUPT20H-209ENST00000471868 ZFP91Q96JP5 570 aaPredicted RBP9.12□□□□□ -0.95
SUPT20H-209ENST00000471868 SHROOM4Q9ULL8 1493 aa9.12□□□□□ -0.95
SUPT20H-209ENST00000471868 RGL2O15211 777 aa9.1□□□□□ -0.95
SUPT20H-209ENST00000471868 RB1CC1Q8TDY2 1594 aa9.1□□□□□ -0.95
SUPT20H-209ENST00000471868 ABCC9O60706 1549 aa9.09□□□□□ -0.95
SUPT20H-209ENST00000471868 ILDR1Q86SU0 546 aaPredicted RBP9.07□□□□□ -0.96
SUPT20H-209ENST00000471868 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.07□□□□□ -0.967e-9■■■■□ 21.7
SUPT20H-209ENST00000471868 EFCAB3Q8N7B9 438 aa9.05□□□□□ -0.96
SUPT20H-209ENST00000471868 BCL11BQ9C0K0 894 aaPredicted RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms