RNA–Protein interactions for RNA: ENST00000471247.5

CCNL1-214, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,671 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-214ENST00000471247 PLEKHG5O94827 1062 aa5.38□□□□□ -1.55
CCNL1-214ENST00000471247 NPM1P06748 294 aaKnown RBP eCLIP5.38□□□□□ -1.55
CCNL1-214ENST00000471247 TAOK2Q9UL54 1235 aa5.38□□□□□ -1.55
CCNL1-214ENST00000471247 ECM2O94769 699 aaPredicted RBP5.35□□□□□ -1.55
CCNL1-214ENST00000471247 MIER1Q8N108 512 aa5.35□□□□□ -1.55
CCNL1-214ENST00000471247 RGL2O15211 777 aa5.35□□□□□ -1.55
CCNL1-214ENST00000471247 PRDM2Q13029 1718 aa5.35□□□□□ -1.55
CCNL1-214ENST00000471247 CLCN6P51797 869 aa5.34□□□□□ -1.55
CCNL1-214ENST00000471247 PLCD3Q8N3E9 789 aa5.34□□□□□ -1.56
CCNL1-214ENST00000471247 RNF25Q96BH1 459 aaPredicted RBP5.34□□□□□ -1.56
CCNL1-214ENST00000471247 SHROOM4Q9ULL8 1493 aa5.34□□□□□ -1.56
CCNL1-214ENST00000471247 RIOK3O14730 519 aaKnown RBP5.33□□□□□ -1.56
CCNL1-214ENST00000471247 PRR29P0C7W0 189 aa5.33□□□□□ -1.56
CCNL1-214ENST00000471247 ILDR1Q86SU0 546 aaPredicted RBP5.33□□□□□ -1.56
CCNL1-214ENST00000471247 VGFO15240 615 aaPredicted RBP5.33□□□□□ -1.56
CCNL1-214ENST00000471247 ZNF579Q8NAF0 562 aaKnown RBP5.32□□□□□ -1.56
CCNL1-214ENST00000471247 RASEFQ8IZ41 740 aa5.3□□□□□ -1.56
CCNL1-214ENST00000471247 CCDC61Q9Y6R9 512 aa5.3□□□□□ -1.56
CCNL1-214ENST00000471247 FAM212AQ96EL1 285 aa5.29□□□□□ -1.56
CCNL1-214ENST00000471247 FARP1Q9Y4F1 1045 aaPredicted RBP5.29□□□□□ -1.56
CCNL1-214ENST00000471247 KLHL34Q8N239 644 aa5.28□□□□□ -1.56
CCNL1-214ENST00000471247 RYDENQ9NUL5 291 aaKnown RBP5.27□□□□□ -1.57
CCNL1-214ENST00000471247 GTPBP6O43824 516 aaPredicted RBP5.26□□□□□ -1.57
CCNL1-214ENST00000471247 C19orf67A6NJJ6 358 aa5.26□□□□□ -1.57
CCNL1-214ENST00000471247 NKX1-1Q15270 411 aaPredicted RBP5.25□□□□□ -1.57
CCNL1-214ENST00000471247 PIP4P2Q8N4L2 257 aa5.25□□□□□ -1.57
CCNL1-214ENST00000471247 ARIH1Q9Y4X5 557 aaPredicted RBP5.25□□□□□ -1.57
CCNL1-214ENST00000471247 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.24□□□□□ -1.57
CCNL1-214ENST00000471247 ZNF467Q7Z7K2 595 aaPredicted RBP5.24□□□□□ -1.57
CCNL1-214ENST00000471247 BAZ1AQ9NRL2 1556 aaPredicted RBP5.22□□□□□ -1.57
CCNL1-214ENST00000471247 SPRYD3Q8NCJ5 442 aa5.22□□□□□ -1.57
CCNL1-214ENST00000471247 KIF12Q96FN5 646 aa5.21□□□□□ -1.58
CCNL1-214ENST00000471247 KDM2AQ9Y2K7 1162 aa5.21□□□□□ -1.58
CCNL1-214ENST00000471247 SOX12O15370 315 aa5.2□□□□□ -1.58
CCNL1-214ENST00000471247 RB1CC1Q8TDY2 1594 aa5.2□□□□□ -1.58
CCNL1-214ENST00000471247 FBXO22Q8NEZ5 403 aa5.19□□□□□ -1.58
CCNL1-214ENST00000471247 PDAP1Q13442 181 aaKnown RBP5.19□□□□□ -1.58
CCNL1-214ENST00000471247 CHRDL2Q6WN34 429 aa5.19□□□□□ -1.58
CCNL1-214ENST00000471247 SCRIBQ14160 1630 aa5.18□□□□□ -1.58
CCNL1-214ENST00000471247 SMARCA4P51532 1647 aa5.18□□□□□ -1.58
CCNL1-214ENST00000471247 DCAF8Q5TAQ9 597 aa5.18□□□□□ -1.58
CCNL1-214ENST00000471247 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.16□□□□□ -1.58
CCNL1-214ENST00000471247 PRKAR2AP13861 404 aaKnown RBP5.16□□□□□ -1.58
CCNL1-214ENST00000471247 MFSD10Q14728 455 aa5.16□□□□□ -1.58
CCNL1-214ENST00000471247 ZFP91Q96JP5 570 aaPredicted RBP5.16□□□□□ -1.58
CCNL1-214ENST00000471247 CIZ1Q9ULV3 898 aaPredicted RBP5.16□□□□□ -1.58
CCNL1-214ENST00000471247 BCANQ96GW7 911 aa5.14□□□□□ -1.59
CCNL1-214ENST00000471247 CLEC11AQ9Y240 323 aa5.14□□□□□ -1.59
CCNL1-214ENST00000471247 WDR97A6NE52 1622 aa5.13□□□□□ -1.59
CCNL1-214ENST00000471247 TIE1P35590 1138 aa5.13□□□□□ -1.59
CCNL1-214ENST00000471247 MFRPQ9BY79 579 aa5.12□□□□□ -1.59
CCNL1-214ENST00000471247 SMARCA2P51531 1590 aa5.11□□□□□ -1.59
CCNL1-214ENST00000471247 CHGAP10645 457 aaKnown RBP5.11□□□□□ -1.59
CCNL1-214ENST00000471247 PAXIP1Q6ZW49 1069 aaPredicted RBP5.11□□□□□ -1.59
CCNL1-214ENST00000471247 WIZO95785 1651 aa5.11□□□□□ -1.59
CCNL1-214ENST00000471247 PSEN1P49768 467 aa5.11□□□□□ -1.59
CCNL1-214ENST00000471247 CAMK2BQ13554 666 aa5.11□□□□□ -1.59
CCNL1-214ENST00000471247 TMEM121BQ9BXQ6 578 aaPredicted RBP5.1□□□□□ -1.59
CCNL1-214ENST00000471247 TSHZ2Q9NRE2 1034 aa5.1□□□□□ -1.59
CCNL1-214ENST00000471247 HAP1P54257 671 aaPredicted RBP5.1□□□□□ -1.59
CCNL1-214ENST00000471247 IFNL1Q8IU54 200 aa5.09□□□□□ -1.59
CCNL1-214ENST00000471247 IER5LQ5T953 404 aa5.09□□□□□ -1.59
CCNL1-214ENST00000471247 BIVM-ERCC5R4GMW8 1640 aa5.09□□□□□ -1.59
CCNL1-214ENST00000471247 NLRP6P59044 892 aa5.08□□□□□ -1.6
CCNL1-214ENST00000471247 HMGXB3Q12766 1538 aa5.08□□□□□ -1.6
CCNL1-214ENST00000471247 CHADLQ6NUI6 762 aa5.08□□□□□ -1.6
CCNL1-214ENST00000471247 BCL11BQ9C0K0 894 aaPredicted RBP5.08□□□□□ -1.6
CCNL1-214ENST00000471247 MROH2BQ7Z745 1585 aa5.08□□□□□ -1.6
CCNL1-214ENST00000471247 PAK3O75914 559 aaPredicted RBP5.07□□□□□ -1.6
CCNL1-214ENST00000471247 PYGBP11216 843 aa5.07□□□□□ -1.6
CCNL1-214ENST00000471247 TOP2AP11388 1531 aaKnown RBP5.07□□□□□ -1.6
CCNL1-214ENST00000471247 ASTLQ6HA08 431 aaPredicted RBP5.07□□□□□ -1.6
CCNL1-214ENST00000471247 MAP3K13O43283 966 aa5.06□□□□□ -1.6
CCNL1-214ENST00000471247 MS4A4AQ96JQ5 239 aa5.06□□□□□ -1.6
CCNL1-214ENST00000471247 CRISPLD2Q9H0B8 497 aa5.06□□□□□ -1.6
CCNL1-214ENST00000471247 STK25O00506 426 aa5.04□□□□□ -1.6
CCNL1-214ENST00000471247 CD44P16070 742 aaKnown RBP5.03□□□□□ -1.6
CCNL1-214ENST00000471247 ARHGEF1Q92888 912 aaKnown RBP5.03□□□□□ -1.6
CCNL1-214ENST00000471247 RSF1Q96T23 1441 aaPredicted RBP5.03□□□□□ -1.6
CCNL1-214ENST00000471247 STK24Q9Y6E0 443 aa5.03□□□□□ -1.6
CCNL1-214ENST00000471247 P3H3Q8IVL6 736 aa5.03□□□□□ -1.6
CCNL1-214ENST00000471247 KIF3CO14782 793 aa5.02□□□□□ -1.61
CCNL1-214ENST00000471247 PCDHB13Q9Y5F0 798 aa5.02□□□□□ -1.61
CCNL1-214ENST00000471247 CADPS2Q86UW7 1296 aa5.02□□□□□ -1.61
CCNL1-214ENST00000471247 PCDHB8Q9UN66 801 aa5.02□□□□□ -1.61
CCNL1-214ENST00000471247 IRX5P78411 483 aaPredicted RBP5.01□□□□□ -1.61
CCNL1-214ENST00000471247 ZRANB1Q9UGI0 708 aa5.01□□□□□ -1.61
CCNL1-214ENST00000471247 CFAP44Q96MT7 982 aa5□□□□□ -1.61
CCNL1-214ENST00000471247 CECR2Q9BXF3 1484 aa5□□□□□ -1.61
CCNL1-214ENST00000471247 NCKAP5LQ9HCH0 1330 aa4.99□□□□□ -1.61
CCNL1-214ENST00000471247 TSPYL2Q9H2G4 693 aaPredicted RBP4.99□□□□□ -1.61
CCNL1-214ENST00000471247 BMP2KQ9NSY1 1161 aaPredicted RBP4.99□□□□□ -1.61
CCNL1-214ENST00000471247 ATMINO43313 823 aaPredicted RBP4.99□□□□□ -1.61
CCNL1-214ENST00000471247 EFCAB3Q8N7B9 438 aa4.99□□□□□ -1.61
CCNL1-214ENST00000471247 TTLL13PA6NNM8 815 aa4.98□□□□□ -1.61
CCNL1-214ENST00000471247 MS4A3Q96HJ5 214 aa4.98□□□□□ -1.61
CCNL1-214ENST00000471247 PPP1R37O75864 691 aa4.98□□□□□ -1.61
CCNL1-214ENST00000471247 TESPA1A2RU30 521 aaPredicted RBP4.97□□□□□ -1.61
CCNL1-214ENST00000471247 PDCD7Q8N8D1 485 aaKnown RBP4.97□□□□□ -1.61
CCNL1-214ENST00000471247 PTGER2P43116 358 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms