RNA–Protein interactions for RNA: ENST00000470661.1

PTP4A1-202, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2

Gene PTP4A1, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-202ENST00000470661 CIZ1Q9ULV3 898 aaPredicted RBP15.22■□□□□ 0.03
PTP4A1-202ENST00000470661 GSE1Q14687 1217 aa15.16■□□□□ 0.02
PTP4A1-202ENST00000470661 PHF12Q96QT6 1004 aa15.16■□□□□ 0.02
PTP4A1-202ENST00000470661 CCDC61Q9Y6R9 512 aa15.16■□□□□ 0.02
PTP4A1-202ENST00000470661 ZNF579Q8NAF0 562 aaKnown RBP15.14■□□□□ 0.01
PTP4A1-202ENST00000470661 PYGBP11216 843 aa15.09■□□□□ 0.01
PTP4A1-202ENST00000470661 PKD2Q13563 968 aa15.05■□□□□ -0
PTP4A1-202ENST00000470661 SP7Q8TDD2 431 aaPredicted RBP15.05■□□□□ -0
PTP4A1-202ENST00000470661 KIF12Q96FN5 646 aa15.03■□□□□ -0
PTP4A1-202ENST00000470661 MAP3K13O43283 966 aa15□□□□□ -0.01
PTP4A1-202ENST00000470661 RTN4Q9NQC3 1192 aaKnown RBP14.99□□□□□ -0.01
PTP4A1-202ENST00000470661 GABBR2O75899 941 aa14.97□□□□□ -0.01
PTP4A1-202ENST00000470661 ECM2O94769 699 aaPredicted RBP14.97□□□□□ -0.01
PTP4A1-202ENST00000470661 TRIM41Q8WV44 630 aa14.96□□□□□ -0.01
PTP4A1-202ENST00000470661 CHRM1P11229 460 aaPredicted RBP14.95□□□□□ -0.02
PTP4A1-202ENST00000470661 AMER1Q5JTC6 1135 aaPredicted RBP14.95□□□□□ -0.02
PTP4A1-202ENST00000470661 MS4A3Q96HJ5 214 aa14.95□□□□□ -0.02
PTP4A1-202ENST00000470661 GALR2O43603 387 aaPredicted RBP14.94□□□□□ -0.02
PTP4A1-202ENST00000470661 PCDHB13Q9Y5F0 798 aa14.94□□□□□ -0.02
PTP4A1-202ENST00000470661 IFNL1Q8IU54 200 aa14.9□□□□□ -0.02
PTP4A1-202ENST00000470661 PCDHB8Q9UN66 801 aa14.89□□□□□ -0.03
PTP4A1-202ENST00000470661 CLCN6P51797 869 aa14.87□□□□□ -0.03
PTP4A1-202ENST00000470661 RNF25Q96BH1 459 aaPredicted RBP14.86□□□□□ -0.03
PTP4A1-202ENST00000470661 SGIP1Q9BQI5 828 aa14.86□□□□□ -0.03
PTP4A1-202ENST00000470661 TRPC6Q9Y210 931 aa14.85□□□□□ -0.03
PTP4A1-202ENST00000470661 RGL2O15211 777 aa14.84□□□□□ -0.03
PTP4A1-202ENST00000470661 ZNF467Q7Z7K2 595 aaPredicted RBP14.82□□□□□ -0.04
PTP4A1-202ENST00000470661 RIOK3O14730 519 aaKnown RBP14.79□□□□□ -0.04
PTP4A1-202ENST00000470661 DCBLD2Q96PD2 775 aa14.72□□□□□ -0.05
PTP4A1-202ENST00000470661 BMP2KQ9NSY1 1161 aaPredicted RBP14.72□□□□□ -0.05
PTP4A1-202ENST00000470661 PSEN1P49768 467 aa14.71□□□□□ -0.05
PTP4A1-202ENST00000470661 PDAP1Q13442 181 aaKnown RBP14.7□□□□□ -0.06
PTP4A1-202ENST00000470661 TMEM106CQ9BVX2 250 aa14.69□□□□□ -0.06
PTP4A1-202ENST00000470661 VGFO15240 615 aaPredicted RBP14.68□□□□□ -0.06
PTP4A1-202ENST00000470661 DCAF8L2P0C7V8 631 aa14.68□□□□□ -0.06
PTP4A1-202ENST00000470661 POTEIP0CG38 1075 aa14.68□□□□□ -0.06
PTP4A1-202ENST00000470661 TIE1P35590 1138 aa14.68□□□□□ -0.06
PTP4A1-202ENST00000470661 TTLL13PA6NNM8 815 aa14.67□□□□□ -0.06
PTP4A1-202ENST00000470661 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.65□□□□□ -0.06
PTP4A1-202ENST00000470661 ATMINO43313 823 aaPredicted RBP14.65□□□□□ -0.06
PTP4A1-202ENST00000470661 ZFP91Q96JP5 570 aaPredicted RBP14.65□□□□□ -0.06
PTP4A1-202ENST00000470661 ASTLQ6HA08 431 aaPredicted RBP14.64□□□□□ -0.07
PTP4A1-202ENST00000470661 ATN1P54259 1190 aaPredicted RBP14.63□□□□□ -0.07
PTP4A1-202ENST00000470661 TAOK2Q9UL54 1235 aa14.6□□□□□ -0.07
PTP4A1-202ENST00000470661 PELP1Q8IZL8 1130 aaKnown RBP14.59□□□□□ -0.07
PTP4A1-202ENST00000470661 STK25O00506 426 aa14.57□□□□□ -0.08
PTP4A1-202ENST00000470661 BCL11BQ9C0K0 894 aaPredicted RBP14.57□□□□□ -0.08
PTP4A1-202ENST00000470661 TRIM35Q9UPQ4 493 aa14.57□□□□□ -0.08
PTP4A1-202ENST00000470661 CHGAP10645 457 aaKnown RBP14.54□□□□□ -0.08
PTP4A1-202ENST00000470661 CABP2Q9NPB3 220 aa14.54□□□□□ -0.08
PTP4A1-202ENST00000470661 STK24Q9Y6E0 443 aa14.54□□□□□ -0.08
PTP4A1-202ENST00000470661 GOLGA2Q08379 1002 aa14.49□□□□□ -0.09
PTP4A1-202ENST00000470661 HS6ST3Q8IZP7 471 aa14.49□□□□□ -0.09
PTP4A1-202ENST00000470661 EFCAB3Q8N7B9 438 aa14.45□□□□□ -0.1
PTP4A1-202ENST00000470661 MKRN3Q13064 507 aaKnown RBP14.44□□□□□ -0.1
PTP4A1-202ENST00000470661 SLC39A7Q92504 469 aa14.44□□□□□ -0.1
PTP4A1-202ENST00000470661 METRNQ9UJH8 293 aa14.43□□□□□ -0.1
PTP4A1-202ENST00000470661 ABCC9O60706 1549 aa14.41□□□□□ -0.1
PTP4A1-202ENST00000470661 C7P10643 843 aa14.4□□□□□ -0.1
PTP4A1-202ENST00000470661 IER5LQ5T953 404 aa14.39□□□□□ -0.11
PTP4A1-202ENST00000470661 COLQQ9Y215 455 aaPredicted RBP14.37□□□□□ -0.11
PTP4A1-202ENST00000470661 SEC24BO95487 1268 aa14.35□□□□□ -0.11
PTP4A1-202ENST00000470661 IRX5P78411 483 aaPredicted RBP14.35□□□□□ -0.11
PTP4A1-202ENST00000470661 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.35□□□□□ -0.111e-9■■□□□ 12.2
PTP4A1-202ENST00000470661 POTEFA5A3E0 1075 aa14.34□□□□□ -0.11
PTP4A1-202ENST00000470661 NKX1-1Q15270 411 aaPredicted RBP14.33□□□□□ -0.12
PTP4A1-202ENST00000470661 PHF8Q9UPP1 1060 aa14.33□□□□□ -0.12
PTP4A1-202ENST00000470661 PLCG2P16885 1265 aa14.32□□□□□ -0.12
PTP4A1-202ENST00000470661 MFRPQ9BY79 579 aa14.31□□□□□ -0.12
PTP4A1-202ENST00000470661 SOX12O15370 315 aa14.3□□□□□ -0.12
PTP4A1-202ENST00000470661 OCEL1Q9H607 264 aa14.3□□□□□ -0.12
PTP4A1-202ENST00000470661 PDCD7Q8N8D1 485 aaKnown RBP14.29□□□□□ -0.12
PTP4A1-202ENST00000470661 DNAJC5Q9H3Z4 198 aa14.29□□□□□ -0.12
PTP4A1-202ENST00000470661 CCDC180Q9P1Z9 1646 aa14.28□□□□□ -0.12
PTP4A1-202ENST00000470661 ILDR1Q86SU0 546 aaPredicted RBP14.26□□□□□ -0.13
PTP4A1-202ENST00000470661 NLRP6P59044 892 aa14.25□□□□□ -0.13
PTP4A1-202ENST00000470661 FBXO22Q8NEZ5 403 aa14.25□□□□□ -0.13
PTP4A1-202ENST00000470661 BBXQ8WY36 941 aaPredicted RBP14.25□□□□□ -0.13
PTP4A1-202ENST00000470661 MS4A4AQ96JQ5 239 aa14.25□□□□□ -0.13
PTP4A1-202ENST00000470661 DPY19L2Q6NUT2 758 aa14.24□□□□□ -0.13
PTP4A1-202ENST00000470661 POTEB2H3BUK9 544 aa14.23□□□□□ -0.13
PTP4A1-202ENST00000470661 POTEJP0CG39 1038 aa14.16□□□□□ -0.14
PTP4A1-202ENST00000470661 GTPBP6O43824 516 aaPredicted RBP14.15□□□□□ -0.14
PTP4A1-202ENST00000470661 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.15□□□□□ -0.14
PTP4A1-202ENST00000470661 LHX8Q68G74 356 aa14.14□□□□□ -0.15
PTP4A1-202ENST00000470661 PPP1R37O75864 691 aa14.13□□□□□ -0.15
PTP4A1-202ENST00000470661 PAXIP1Q6ZW49 1069 aaPredicted RBP14.1□□□□□ -0.15
PTP4A1-202ENST00000470661 L3MBTL3Q96JM7 780 aaPredicted RBP14.09□□□□□ -0.15
PTP4A1-202ENST00000470661 CFAP44Q96MT7 982 aa14.09□□□□□ -0.15
PTP4A1-202ENST00000470661 RYDENQ9NUL5 291 aaKnown RBP14.09□□□□□ -0.15
PTP4A1-202ENST00000470661 BOLA1Q9Y3E2 137 aa14.09□□□□□ -0.15
PTP4A1-202ENST00000470661 SPRYD3Q8NCJ5 442 aa14.07□□□□□ -0.16
PTP4A1-202ENST00000470661 G3V3G9 751 aa14.06□□□□□ -0.16
PTP4A1-202ENST00000470661 MICALL2Q8IY33 904 aa14.05□□□□□ -0.16
PTP4A1-202ENST00000470661 TMEM121BQ9BXQ6 578 aaPredicted RBP14.01□□□□□ -0.17
PTP4A1-202ENST00000470661 C3orf67Q6ZVT6 689 aa14□□□□□ -0.17
PTP4A1-202ENST00000470661 OTUD5Q96G74 571 aa13.99□□□□□ -0.17
PTP4A1-202ENST00000470661 SCUBE2Q9NQ36 999 aa13.99□□□□□ -0.17
PTP4A1-202ENST00000470661 MAMSTRQ6ZN01 415 aa13.98□□□□□ -0.17
PTP4A1-202ENST00000470661 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms