RNA–Protein interactions for RNA: ENST00000468820.1

GSDMB-207, Transcript of gasdermin B, humanhuman

TSL 5

Gene GSDMB, Length 369 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMB-207ENST00000468820 CCDC61Q9Y6R9 512 aa11.98□□□□□ -0.49
GSDMB-207ENST00000468820 FAM212AQ96EL1 285 aa11.94□□□□□ -0.5
GSDMB-207ENST00000468820 GALR2O43603 387 aaPredicted RBP11.92□□□□□ -0.5
GSDMB-207ENST00000468820 CLCN6P51797 869 aa11.92□□□□□ -0.5
GSDMB-207ENST00000468820 DCAF8Q5TAQ9 597 aa11.91□□□□□ -0.5
GSDMB-207ENST00000468820 SPOCK2Q92563 424 aa11.91□□□□□ -0.5
GSDMB-207ENST00000468820 KIF12Q96FN5 646 aa11.88□□□□□ -0.51
GSDMB-207ENST00000468820 MS4A3Q96HJ5 214 aa11.87□□□□□ -0.51
GSDMB-207ENST00000468820 MAP3K13O43283 966 aa11.85□□□□□ -0.51
GSDMB-207ENST00000468820 POTEIP0CG38 1075 aa11.82□□□□□ -0.52
GSDMB-207ENST00000468820 GSE1Q14687 1217 aa11.82□□□□□ -0.52
GSDMB-207ENST00000468820 PYGBP11216 843 aa11.81□□□□□ -0.52
GSDMB-207ENST00000468820 DCBLD2Q96PD2 775 aa11.8□□□□□ -0.52
GSDMB-207ENST00000468820 CIZ1Q9ULV3 898 aaPredicted RBP11.8□□□□□ -0.52
GSDMB-207ENST00000468820 PCDHB13Q9Y5F0 798 aa11.78□□□□□ -0.52
GSDMB-207ENST00000468820 TRPC6Q9Y210 931 aa11.76□□□□□ -0.53
GSDMB-207ENST00000468820 IFNL1Q8IU54 200 aa11.73□□□□□ -0.53
GSDMB-207ENST00000468820 SGIP1Q9BQI5 828 aa11.72□□□□□ -0.53
GSDMB-207ENST00000468820 CHRM1P11229 460 aaPredicted RBP11.68□□□□□ -0.54
GSDMB-207ENST00000468820 PCDHB8Q9UN66 801 aa11.68□□□□□ -0.54
GSDMB-207ENST00000468820 ATMINO43313 823 aaPredicted RBP11.67□□□□□ -0.54
GSDMB-207ENST00000468820 ASTLQ6HA08 431 aaPredicted RBP11.67□□□□□ -0.54
GSDMB-207ENST00000468820 BMP2KQ9NSY1 1161 aaPredicted RBP11.67□□□□□ -0.54
GSDMB-207ENST00000468820 PELP1Q8IZL8 1130 aaKnown RBP11.66□□□□□ -0.54
GSDMB-207ENST00000468820 TIE1P35590 1138 aa11.64□□□□□ -0.55
GSDMB-207ENST00000468820 ATN1P54259 1190 aaPredicted RBP11.64□□□□□ -0.55
GSDMB-207ENST00000468820 TTLL13PA6NNM8 815 aa11.61□□□□□ -0.55
GSDMB-207ENST00000468820 ZNF467Q7Z7K2 595 aaPredicted RBP11.6□□□□□ -0.55
GSDMB-207ENST00000468820 TRIM41Q8WV44 630 aa11.59□□□□□ -0.55
GSDMB-207ENST00000468820 TMEM106CQ9BVX2 250 aa11.59□□□□□ -0.55
GSDMB-207ENST00000468820 PKD2Q13563 968 aa11.54□□□□□ -0.56
GSDMB-207ENST00000468820 TRIM35Q9UPQ4 493 aa11.54□□□□□ -0.56
GSDMB-207ENST00000468820 SLC39A7Q92504 469 aa11.53□□□□□ -0.56
GSDMB-207ENST00000468820 RNF25Q96BH1 459 aaPredicted RBP11.53□□□□□ -0.56
GSDMB-207ENST00000468820 METRNQ9UJH8 293 aa11.53□□□□□ -0.56
GSDMB-207ENST00000468820 PSEN1P49768 467 aa11.52□□□□□ -0.57
GSDMB-207ENST00000468820 NISCHQ9Y2I1 1504 aa11.51□□□□□ -0.57
GSDMB-207ENST00000468820 ECM2O94769 699 aaPredicted RBP11.51□□□□□ -0.57
GSDMB-207ENST00000468820 C7P10643 843 aa11.5□□□□□ -0.57
GSDMB-207ENST00000468820 PDAP1Q13442 181 aaKnown RBP11.49□□□□□ -0.57
GSDMB-207ENST00000468820 LHX8Q68G74 356 aa11.49□□□□□ -0.57
GSDMB-207ENST00000468820 RIOK3O14730 519 aaKnown RBP11.47□□□□□ -0.57
GSDMB-207ENST00000468820 POTEFA5A3E0 1075 aa11.45□□□□□ -0.58
GSDMB-207ENST00000468820 POTEB2H3BUK9 544 aa11.45□□□□□ -0.58
GSDMB-207ENST00000468820 COLQQ9Y215 455 aaPredicted RBP11.43□□□□□ -0.58
GSDMB-207ENST00000468820 RGL2O15211 777 aa11.42□□□□□ -0.58
GSDMB-207ENST00000468820 IER5LQ5T953 404 aa11.42□□□□□ -0.58
GSDMB-207ENST00000468820 SEC24BO95487 1268 aa11.4□□□□□ -0.58
GSDMB-207ENST00000468820 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.39□□□□□ -0.59
GSDMB-207ENST00000468820 VGFO15240 615 aaPredicted RBP11.39□□□□□ -0.59
GSDMB-207ENST00000468820 GOLGA2Q08379 1002 aa11.39□□□□□ -0.59
GSDMB-207ENST00000468820 ZFP91Q96JP5 570 aaPredicted RBP11.39□□□□□ -0.59
GSDMB-207ENST00000468820 CABP2Q9NPB3 220 aa11.39□□□□□ -0.59
GSDMB-207ENST00000468820 IRX5P78411 483 aaPredicted RBP11.37□□□□□ -0.59
GSDMB-207ENST00000468820 MKRN3Q13064 507 aaKnown RBP11.36□□□□□ -0.59
GSDMB-207ENST00000468820 POTEJP0CG39 1038 aa11.35□□□□□ -0.59
GSDMB-207ENST00000468820 PLCG2P16885 1265 aa11.34□□□□□ -0.59
GSDMB-207ENST00000468820 OCEL1Q9H607 264 aa11.32□□□□□ -0.6
GSDMB-207ENST00000468820 TAOK2Q9UL54 1235 aa11.31□□□□□ -0.6
GSDMB-207ENST00000468820 EFCAB3Q8N7B9 438 aa11.3□□□□□ -0.6
GSDMB-207ENST00000468820 OTUD5Q96G74 571 aa11.3□□□□□ -0.6
GSDMB-207ENST00000468820 BCL11BQ9C0K0 894 aaPredicted RBP11.3□□□□□ -0.6
GSDMB-207ENST00000468820 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.29□□□□□ -0.66e-8■■■□□ 18
GSDMB-207ENST00000468820 STK25O00506 426 aa11.28□□□□□ -0.6
GSDMB-207ENST00000468820 PDCD7Q8N8D1 485 aaKnown RBP11.28□□□□□ -0.6
GSDMB-207ENST00000468820 STK24Q9Y6E0 443 aa11.28□□□□□ -0.6
GSDMB-207ENST00000468820 ILDR1Q86SU0 546 aaPredicted RBP11.23□□□□□ -0.61
GSDMB-207ENST00000468820 DPY19L2Q6NUT2 758 aa11.22□□□□□ -0.61
GSDMB-207ENST00000468820 MAMSTRQ6ZN01 415 aa11.21□□□□□ -0.61
GSDMB-207ENST00000468820 SCUBE2Q9NQ36 999 aa11.21□□□□□ -0.61
GSDMB-207ENST00000468820 PHF8Q9UPP1 1060 aa11.19□□□□□ -0.62
GSDMB-207ENST00000468820 SOX12O15370 315 aa11.18□□□□□ -0.62
GSDMB-207ENST00000468820 CHGAP10645 457 aaKnown RBP11.16□□□□□ -0.62
GSDMB-207ENST00000468820 RTN4Q9NQC3 1192 aaKnown RBP11.16□□□□□ -0.62
GSDMB-207ENST00000468820 AMER1Q5JTC6 1135 aaPredicted RBP11.15□□□□□ -0.62
GSDMB-207ENST00000468820 MS4A4AQ96JQ5 239 aa11.15□□□□□ -0.62
GSDMB-207ENST00000468820 DCAF8L2P0C7V8 631 aa11.14□□□□□ -0.63
GSDMB-207ENST00000468820 HS6ST3Q8IZP7 471 aa11.14□□□□□ -0.63
GSDMB-207ENST00000468820 L3MBTL3Q96JM7 780 aaPredicted RBP11.14□□□□□ -0.63
GSDMB-207ENST00000468820 MFRPQ9BY79 579 aa11.13□□□□□ -0.63
GSDMB-207ENST00000468820 FBXO22Q8NEZ5 403 aa11.12□□□□□ -0.63
GSDMB-207ENST00000468820 NLRP6P59044 892 aa11.11□□□□□ -0.63
GSDMB-207ENST00000468820 BOLA1Q9Y3E2 137 aa11.1□□□□□ -0.63
GSDMB-207ENST00000468820 C3orf67Q6ZVT6 689 aa11.08□□□□□ -0.64
GSDMB-207ENST00000468820 SLAIN1Q8ND83 568 aa11.08□□□□□ -0.64
GSDMB-207ENST00000468820 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.08□□□□□ -0.64
GSDMB-207ENST00000468820 G3V3G9 751 aa11.07□□□□□ -0.64
GSDMB-207ENST00000468820 NKX1-1Q15270 411 aaPredicted RBP11.03□□□□□ -0.64
GSDMB-207ENST00000468820 MICALL2Q8IY33 904 aa11.03□□□□□ -0.64
GSDMB-207ENST00000468820 TMEM121BQ9BXQ6 578 aaPredicted RBP11.03□□□□□ -0.64
GSDMB-207ENST00000468820 DNAJC5Q9H3Z4 198 aa11□□□□□ -0.65
GSDMB-207ENST00000468820 PPP1R37O75864 691 aa10.98□□□□□ -0.65
GSDMB-207ENST00000468820 TMEM92Q6UXU6 159 aa10.94□□□□□ -0.66
GSDMB-207ENST00000468820 FAM163AQ96GL9 167 aaPredicted RBP10.94□□□□□ -0.66
GSDMB-207ENST00000468820 LCE2DQ5TA82 110 aaPredicted RBP10.91□□□□□ -0.66
GSDMB-207ENST00000468820 GTPBP6O43824 516 aaPredicted RBP10.88□□□□□ -0.67
GSDMB-207ENST00000468820 RYDENQ9NUL5 291 aaKnown RBP10.86□□□□□ -0.67
GSDMB-207ENST00000468820 SNPHO15079 494 aa10.85□□□□□ -0.67
GSDMB-207ENST00000468820 ST18O60284 1047 aa10.85□□□□□ -0.67
GSDMB-207ENST00000468820 BBXQ8WY36 941 aaPredicted RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms